RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
NUP98-212ENST00000488828 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
NUP98-212ENST00000488828 ZNF142P52746 1687 aaPredicted RBP16.34■□□□□ 0.21
NUP98-212ENST00000488828 BCANQ96GW7 911 aa16.33■□□□□ 0.2
NUP98-212ENST00000488828 NOS1P29475 1434 aa16.33■□□□□ 0.2
NUP98-212ENST00000488828 MPHOSPH9Q99550 1183 aa16.32■□□□□ 0.2
NUP98-212ENST00000488828 STRCQ7RTU9 1775 aa16.31■□□□□ 0.2
NUP98-212ENST00000488828 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
NUP98-212ENST00000488828 E9PCH4 1651 aa16.3■□□□□ 0.2
NUP98-212ENST00000488828 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
NUP98-212ENST00000488828 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
NUP98-212ENST00000488828 PTPRTO14522 1441 aa16.29■□□□□ 0.2
NUP98-212ENST00000488828 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
NUP98-212ENST00000488828 ZNF326Q5BKZ1 582 aaKnown RBP16.29■□□□□ 0.2
NUP98-212ENST00000488828 SYNMO15061 1565 aa16.29■□□□□ 0.2
NUP98-212ENST00000488828 PIK3C2BO00750 1634 aa16.28■□□□□ 0.2
NUP98-212ENST00000488828 LTKP29376 864 aa16.28■□□□□ 0.2
NUP98-212ENST00000488828 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
NUP98-212ENST00000488828 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
NUP98-212ENST00000488828 UBR1Q8IWV7 1749 aa16.25■□□□□ 0.19
NUP98-212ENST00000488828 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
NUP98-212ENST00000488828 TRIM26Q12899 539 aaPredicted RBP16.24■□□□□ 0.19
NUP98-212ENST00000488828 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
NUP98-212ENST00000488828 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
NUP98-212ENST00000488828 ZNF335Q9H4Z2 1342 aaPredicted RBP16.22■□□□□ 0.19
NUP98-212ENST00000488828 HRCP23327 699 aa16.22■□□□□ 0.19
NUP98-212ENST00000488828 CERKQ8TCT0 537 aa16.22■□□□□ 0.19
NUP98-212ENST00000488828 ADGRB3O60242 1522 aa16.21■□□□□ 0.19
NUP98-212ENST00000488828 SLC26A8Q96RN1 970 aa16.21■□□□□ 0.19
NUP98-212ENST00000488828 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
NUP98-212ENST00000488828 SLIT1O75093 1534 aa16.19■□□□□ 0.18
NUP98-212ENST00000488828 POLR1AO95602 1720 aaPredicted RBP16.19■□□□□ 0.18
NUP98-212ENST00000488828 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
NUP98-212ENST00000488828 FKBP8Q14318 412 aa16.19■□□□□ 0.18
NUP98-212ENST00000488828 SPHKAPQ2M3C7 1700 aa16.19■□□□□ 0.18
NUP98-212ENST00000488828 RGL3Q3MIN7 710 aa16.18■□□□□ 0.18
NUP98-212ENST00000488828 MED14O60244 1454 aa16.17■□□□□ 0.18
NUP98-212ENST00000488828 TMEM131LA2VDJ0 1609 aa16.17■□□□□ 0.18
NUP98-212ENST00000488828 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
NUP98-212ENST00000488828 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
NUP98-212ENST00000488828 KDM5AP29375 1690 aaKnown RBP16.16■□□□□ 0.18
NUP98-212ENST00000488828 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
NUP98-212ENST00000488828 TRPM2O94759 1503 aa16.15■□□□□ 0.18
NUP98-212ENST00000488828 IQGAP1P46940 1657 aa16.14■□□□□ 0.18
NUP98-212ENST00000488828 CLTCL1P53675 1640 aa16.13■□□□□ 0.17
NUP98-212ENST00000488828 MYO5BQ9ULV0 1848 aa16.13■□□□□ 0.17
NUP98-212ENST00000488828 ZFYVE9O95405 1425 aa16.12■□□□□ 0.17
NUP98-212ENST00000488828 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
NUP98-212ENST00000488828 PLEKHG1Q9ULL1 1385 aa16.12■□□□□ 0.17
NUP98-212ENST00000488828 RPGRIP1LQ68CZ1 1315 aa16.11■□□□□ 0.17
NUP98-212ENST00000488828 ILDR1Q86SU0 546 aaPredicted RBP16.1■□□□□ 0.17
NUP98-212ENST00000488828 FBXO41Q8TF61 875 aa16.1■□□□□ 0.17
NUP98-212ENST00000488828 KIF1BO60333 1816 aa16.1■□□□□ 0.17
NUP98-212ENST00000488828 TBX22Q9Y458 520 aa16.09■□□□□ 0.17
NUP98-212ENST00000488828 KCNA6P17658 529 aa16.08■□□□□ 0.16
NUP98-212ENST00000488828 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
NUP98-212ENST00000488828 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.16
NUP98-212ENST00000488828 LTBP4Q8N2S1 1624 aa16.08■□□□□ 0.16
NUP98-212ENST00000488828 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
NUP98-212ENST00000488828 ANKRD30BQ9BXX2 1392 aa16.05■□□□□ 0.16
NUP98-212ENST00000488828 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
NUP98-212ENST00000488828 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
NUP98-212ENST00000488828 CPS1P31327 1500 aa16.04■□□□□ 0.16
NUP98-212ENST00000488828 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
NUP98-212ENST00000488828 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
NUP98-212ENST00000488828 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
NUP98-212ENST00000488828 KDM2AQ9Y2K7 1162 aa16.04■□□□□ 0.16
NUP98-212ENST00000488828 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
NUP98-212ENST00000488828 TOM1O60784 492 aa16.02■□□□□ 0.16
NUP98-212ENST00000488828 AMOTL2Q9Y2J4 779 aa16.02■□□□□ 0.16
NUP98-212ENST00000488828 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
NUP98-212ENST00000488828 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
NUP98-212ENST00000488828 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
NUP98-212ENST00000488828 SPATA31E1Q6ZUB1 1445 aa16.01■□□□□ 0.15
NUP98-212ENST00000488828 ADAMTS13Q76LX8 1427 aa16.01■□□□□ 0.15
NUP98-212ENST00000488828 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
NUP98-212ENST00000488828 NEUROD1Q13562 356 aa16■□□□□ 0.15
NUP98-212ENST00000488828 LRRC7Q96NW7 1537 aa15.98■□□□□ 0.15
NUP98-212ENST00000488828 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
NUP98-212ENST00000488828 IQSEC2Q5JU85 1478 aa15.97■□□□□ 0.15
NUP98-212ENST00000488828 METP08581 1390 aa15.97■□□□□ 0.15
NUP98-212ENST00000488828 PIK3R4Q99570 1358 aa15.97■□□□□ 0.15
NUP98-212ENST00000488828 STRCP1A6NGW2 1772 aa15.96■□□□□ 0.15
NUP98-212ENST00000488828 SIN3AQ96ST3 1273 aa15.96■□□□□ 0.15
NUP98-212ENST00000488828 STK26Q9P289 416 aa15.96■□□□□ 0.15
NUP98-212ENST00000488828 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
NUP98-212ENST00000488828 DIP2AQ14689 1571 aa15.95■□□□□ 0.14
NUP98-212ENST00000488828 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
NUP98-212ENST00000488828 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
NUP98-212ENST00000488828 SETBP1Q9Y6X0 1596 aa15.94■□□□□ 0.14
NUP98-212ENST00000488828 PPLO60437 1756 aa15.93■□□□□ 0.14
NUP98-212ENST00000488828 MSH6P52701 1360 aa15.92■□□□□ 0.14
NUP98-212ENST00000488828 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
NUP98-212ENST00000488828 CFAP70Q5T0N1 1121 aa15.92■□□□□ 0.14
NUP98-212ENST00000488828 PTPRUQ92729 1446 aa15.92■□□□□ 0.14
NUP98-212ENST00000488828 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
NUP98-212ENST00000488828 ATF3P18847 181 aa15.91■□□□□ 0.14
NUP98-212ENST00000488828 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
NUP98-212ENST00000488828 CHD2O14647 1828 aaKnown RBP15.91■□□□□ 0.14
NUP98-212ENST00000488828 ALKQ9UM73 1620 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms