RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NUTM2FA1L443 756 aa8.49□□□□□ -1.05
CD46-215ENST00000488596 ADGRG1Q9Y653 693 aa8.49□□□□□ -1.05
CD46-215ENST00000488596 DNAJB2P25686 324 aa8.47□□□□□ -1.05
CD46-215ENST00000488596 RBM46Q8TBY0 533 aaKnown RBP8.46□□□□□ -1.06
CD46-215ENST00000488596 TMEM134Q9H6X4 195 aa8.46□□□□□ -1.06
CD46-215ENST00000488596 RCCD1A6NED2 376 aa8.45□□□□□ -1.06
CD46-215ENST00000488596 ZPR1O75312 459 aa8.45□□□□□ -1.06
CD46-215ENST00000488596 DGAT1O75907 488 aa8.45□□□□□ -1.06
CD46-215ENST00000488596 SLC4A3P48751 1232 aa8.45□□□□□ -1.06
CD46-215ENST00000488596 P3H3Q8IVL6 736 aa8.45□□□□□ -1.06
CD46-215ENST00000488596 PKDCCQ504Y2 493 aa8.44□□□□□ -1.06
CD46-215ENST00000488596 PCDHB3Q9Y5E6 796 aa8.44□□□□□ -1.06
CD46-215ENST00000488596 FCHSD2O94868 740 aa8.43□□□□□ -1.06
CD46-215ENST00000488596 MYT1Q01538 1121 aa8.43□□□□□ -1.06
CD46-215ENST00000488596 BLOC1S3Q6QNY0 202 aa8.43□□□□□ -1.06
CD46-215ENST00000488596 TRIM67Q6ZTA4 783 aa8.43□□□□□ -1.06
CD46-215ENST00000488596 PRR20EP86478 221 aa8.42□□□□□ -1.06
CD46-215ENST00000488596 PRR20CP86479 221 aa8.42□□□□□ -1.06
CD46-215ENST00000488596 PRR20DP86480 221 aa8.42□□□□□ -1.06
CD46-215ENST00000488596 PRR20BP86481 221 aa8.42□□□□□ -1.06
CD46-215ENST00000488596 PRR20AP86496 221 aa8.42□□□□□ -1.06
CD46-215ENST00000488596 PRR14Q9BWN1 585 aa8.42□□□□□ -1.06
CD46-215ENST00000488596 SLC10A3P09131 477 aa8.41□□□□□ -1.06
CD46-215ENST00000488596 SLC19A1P41440 591 aa8.41□□□□□ -1.06
CD46-215ENST00000488596 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.06
CD46-215ENST00000488596 PLCB2Q00722 1185 aa8.4□□□□□ -1.06
CD46-215ENST00000488596 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.06
CD46-215ENST00000488596 TESPA1A2RU30 521 aaPredicted RBP8.39□□□□□ -1.07
CD46-215ENST00000488596 TLL1O43897 1013 aa8.39□□□□□ -1.07
CD46-215ENST00000488596 PXYLP1Q8TE99 480 aa8.39□□□□□ -1.07
CD46-215ENST00000488596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
CD46-215ENST00000488596 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
CD46-215ENST00000488596 CFHP08603 1231 aa8.38□□□□□ -1.07
CD46-215ENST00000488596 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
CD46-215ENST00000488596 OATP04181 439 aa8.37□□□□□ -1.07
CD46-215ENST00000488596 FECHP22830 423 aa8.37□□□□□ -1.07
CD46-215ENST00000488596 KMT5BQ4FZB7 885 aa8.37□□□□□ -1.07
CD46-215ENST00000488596 SPRYD7Q5W111 196 aa8.37□□□□□ -1.07
CD46-215ENST00000488596 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
CD46-215ENST00000488596 EMID1Q96A84 441 aaPredicted RBP8.37□□□□□ -1.07
CD46-215ENST00000488596 PPEF1O14829 653 aaPredicted RBP8.36□□□□□ -1.07
CD46-215ENST00000488596 HIC1Q14526 733 aa8.36□□□□□ -1.07
CD46-215ENST00000488596 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
CD46-215ENST00000488596 POTECB2RU33 542 aa8.35□□□□□ -1.07
CD46-215ENST00000488596 METTL3Q86U44 580 aaKnown RBP8.35□□□□□ -1.07
CD46-215ENST00000488596 GPR37O15354 613 aa8.34□□□□□ -1.07
CD46-215ENST00000488596 S1PR4O95977 384 aa8.34□□□□□ -1.07
CD46-215ENST00000488596 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
CD46-215ENST00000488596 GNPATO15228 680 aa8.32□□□□□ -1.08
CD46-215ENST00000488596 PUS10Q3MIT2 529 aaKnown RBP8.32□□□□□ -1.08
CD46-215ENST00000488596 SCUBE3Q8IX30 993 aa8.32□□□□□ -1.08
CD46-215ENST00000488596 FAM187AA6NFU0 413 aa8.31□□□□□ -1.08
CD46-215ENST00000488596 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
CD46-215ENST00000488596 GDF9O60383 454 aa8.3□□□□□ -1.08
CD46-215ENST00000488596 NR1I2O75469 434 aa8.3□□□□□ -1.08
CD46-215ENST00000488596 ZNF697Q5TEC3 545 aa8.3□□□□□ -1.08
CD46-215ENST00000488596 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
CD46-215ENST00000488596 NLRP7Q8WX94 980 aa8.3□□□□□ -1.08
CD46-215ENST00000488596 ADH1BP00325 375 aa8.29□□□□□ -1.08
CD46-215ENST00000488596 PHOX2BQ99453 314 aa8.28□□□□□ -1.08
CD46-215ENST00000488596 AAASQ9NRG9 546 aa8.28□□□□□ -1.08
CD46-215ENST00000488596 STK17AQ9UEE5 414 aa8.28□□□□□ -1.08
CD46-215ENST00000488596 DAXXQ9UER7 740 aaPredicted RBP8.28□□□□□ -1.08
CD46-215ENST00000488596 SLC24A1O60721 1099 aa8.27□□□□□ -1.09
CD46-215ENST00000488596 PLA2G2CQ5R387 149 aa8.27□□□□□ -1.09
CD46-215ENST00000488596 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.09
CD46-215ENST00000488596 SLC6A16Q9GZN6 736 aa8.27□□□□□ -1.09
CD46-215ENST00000488596 KDM2AQ9Y2K7 1162 aa8.27□□□□□ -1.09
CD46-215ENST00000488596 DDX11L8A8MPP1 907 aa8.26□□□□□ -1.09
CD46-215ENST00000488596 HAP1P54257 671 aaPredicted RBP8.26□□□□□ -1.09
CD46-215ENST00000488596 LMOD2Q6P5Q4 547 aa8.26□□□□□ -1.09
CD46-215ENST00000488596 CRIPAKQ8N1N5 446 aa8.26□□□□□ -1.09
CD46-215ENST00000488596 RDH13Q8NBN7 331 aa8.25□□□□□ -1.09
CD46-215ENST00000488596 SPSB2Q99619 263 aa8.25□□□□□ -1.09
CD46-215ENST00000488596 TNFRSF10AO00220 468 aa8.24□□□□□ -1.09
CD46-215ENST00000488596 FUT2Q10981 343 aa8.24□□□□□ -1.09
CD46-215ENST00000488596 MORN1Q5T089 497 aa8.24□□□□□ -1.09
CD46-215ENST00000488596 ST8SIA5O15466 376 aa8.23□□□□□ -1.09
CD46-215ENST00000488596 WFS1O76024 890 aa8.23□□□□□ -1.09
CD46-215ENST00000488596 WIPF1O43516 503 aa8.22□□□□□ -1.09
CD46-215ENST00000488596 GCGRP47871 477 aa8.22□□□□□ -1.09
CD46-215ENST00000488596 INSM1Q01101 510 aaPredicted RBP8.22□□□□□ -1.09
CD46-215ENST00000488596 GPIHBP1Q8IV16 184 aa8.22□□□□□ -1.09
CD46-215ENST00000488596 THAP11Q96EK4 314 aa8.22□□□□□ -1.09
CD46-215ENST00000488596 ATP6V1AP38606 617 aa8.21□□□□□ -1.1
CD46-215ENST00000488596 SLC27A5Q9Y2P5 690 aa8.21□□□□□ -1.1
CD46-215ENST00000488596 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
CD46-215ENST00000488596 AVPP01185 164 aa8.19□□□□□ -1.1
CD46-215ENST00000488596 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
CD46-215ENST00000488596 SULF1Q8IWU6 871 aa8.18□□□□□ -1.1
CD46-215ENST00000488596 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
CD46-215ENST00000488596 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
CD46-215ENST00000488596 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
CD46-215ENST00000488596 NFX1Q12986 1120 aaKnown RBP8.16□□□□□ -1.1
CD46-215ENST00000488596 BRICD5Q6PL45 260 aa8.16□□□□□ -1.1
CD46-215ENST00000488596 RNF19BQ6ZMZ0 732 aa8.16□□□□□ -1.1
CD46-215ENST00000488596 PRDM9Q9NQV7 894 aa8.16□□□□□ -1.1
CD46-215ENST00000488596 C11orf95C9JLR9 678 aaPredicted RBP8.15□□□□□ -1.1
CD46-215ENST00000488596 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
CD46-215ENST00000488596 FOXC1Q12948 553 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms