RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 AK7Q96M32 723 aa9.82□□□□□ -0.84
ITGB1-214ENST00000488427 ADGRG1Q9Y653 693 aa9.81□□□□□ -0.84
ITGB1-214ENST00000488427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.8□□□□□ -0.84
ITGB1-214ENST00000488427 LAPTM4AQ15012 233 aa9.8□□□□□ -0.84
ITGB1-214ENST00000488427 NECTIN2Q92692 538 aa9.8□□□□□ -0.84
ITGB1-214ENST00000488427 NUDT18Q6ZVK8 323 aa9.79□□□□□ -0.84
ITGB1-214ENST00000488427 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
ITGB1-214ENST00000488427 DNAJB2P25686 324 aa9.78□□□□□ -0.84
ITGB1-214ENST00000488427 TJAP1Q5JTD0 557 aa9.78□□□□□ -0.84
ITGB1-214ENST00000488427 CCDC102AQ96A19 550 aa9.78□□□□□ -0.84
ITGB1-214ENST00000488427 RSPH4AQ5TD94 716 aa9.77□□□□□ -0.85
ITGB1-214ENST00000488427 METTL3Q86U44 580 aaKnown RBP9.77□□□□□ -0.85
ITGB1-214ENST00000488427 RNF40O75150 1001 aa9.76□□□□□ -0.85
ITGB1-214ENST00000488427 FECHP22830 423 aa9.76□□□□□ -0.85
ITGB1-214ENST00000488427 PXYLP1Q8TE99 480 aa9.76□□□□□ -0.85
ITGB1-214ENST00000488427 MTRQ99707 1265 aa9.76□□□□□ -0.85
ITGB1-214ENST00000488427 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
ITGB1-214ENST00000488427 EYA1Q99502 592 aa9.75□□□□□ -0.85
ITGB1-214ENST00000488427 C3orf80F5H4A9 247 aa9.74□□□□□ -0.85
ITGB1-214ENST00000488427 CLCN1P35523 988 aa9.74□□□□□ -0.85
ITGB1-214ENST00000488427 GFRA3O60609 400 aa9.73□□□□□ -0.85
ITGB1-214ENST00000488427 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
ITGB1-214ENST00000488427 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
ITGB1-214ENST00000488427 SLC24A3Q9HC58 644 aa9.73□□□□□ -0.85
ITGB1-214ENST00000488427 RCCD1A6NED2 376 aa9.72□□□□□ -0.85
ITGB1-214ENST00000488427 SULF1Q8IWU6 871 aa9.72□□□□□ -0.85
ITGB1-214ENST00000488427 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.86
ITGB1-214ENST00000488427 AMHR2Q16671 573 aa9.71□□□□□ -0.86
ITGB1-214ENST00000488427 PPP1R18Q6NYC8 613 aa9.71□□□□□ -0.86
ITGB1-214ENST00000488427 TMEM134Q9H6X4 195 aa9.71□□□□□ -0.86
ITGB1-214ENST00000488427 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
ITGB1-214ENST00000488427 TRIM66O15016 1216 aa9.69□□□□□ -0.86
ITGB1-214ENST00000488427 APLP1P51693 650 aa9.69□□□□□ -0.86
ITGB1-214ENST00000488427 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
ITGB1-214ENST00000488427 GPCPD1Q9NPB8 672 aa9.69□□□□□ -0.86
ITGB1-214ENST00000488427 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
ITGB1-214ENST00000488427 FAM161AQ3B820 660 aa9.68□□□□□ -0.86
ITGB1-214ENST00000488427 TRAF7Q6Q0C0 670 aa9.68□□□□□ -0.86
ITGB1-214ENST00000488427 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
ITGB1-214ENST00000488427 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
ITGB1-214ENST00000488427 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
ITGB1-214ENST00000488427 SWT1Q5T5J6 900 aaKnown RBP9.66□□□□□ -0.86
ITGB1-214ENST00000488427 GGCXP38435 758 aa9.65□□□□□ -0.86
ITGB1-214ENST00000488427 MDM2Q00987 491 aaPredicted RBP9.65□□□□□ -0.86
ITGB1-214ENST00000488427 PDE4DQ08499 809 aa9.65□□□□□ -0.86
ITGB1-214ENST00000488427 COPS2P61201 443 aa9.63□□□□□ -0.87
ITGB1-214ENST00000488427 LCE2BO14633 110 aa9.62□□□□□ -0.87
ITGB1-214ENST00000488427 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
ITGB1-214ENST00000488427 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
ITGB1-214ENST00000488427 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
ITGB1-214ENST00000488427 RDH13Q8NBN7 331 aa9.61□□□□□ -0.87
ITGB1-214ENST00000488427 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
ITGB1-214ENST00000488427 NEUROD2Q15784 382 aa9.6□□□□□ -0.87
ITGB1-214ENST00000488427 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
ITGB1-214ENST00000488427 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
ITGB1-214ENST00000488427 DIXDC1Q155Q3 683 aa9.59□□□□□ -0.87
ITGB1-214ENST00000488427 PARP9Q8IXQ6 854 aa9.59□□□□□ -0.87
ITGB1-214ENST00000488427 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
ITGB1-214ENST00000488427 PDZRN3Q9UPQ7 1066 aa9.59□□□□□ -0.87
ITGB1-214ENST00000488427 ZPR1O75312 459 aa9.58□□□□□ -0.88
ITGB1-214ENST00000488427 FAM217BQ9NTX9 383 aaPredicted RBP9.58□□□□□ -0.88
ITGB1-214ENST00000488427 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
ITGB1-214ENST00000488427 PCDHB3Q9Y5E6 796 aa9.57□□□□□ -0.88
ITGB1-214ENST00000488427 SSTR3P32745 418 aaPredicted RBP9.56□□□□□ -0.88
ITGB1-214ENST00000488427 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
ITGB1-214ENST00000488427 NLRP7Q8WX94 980 aa9.55□□□□□ -0.88
ITGB1-214ENST00000488427 CFHP08603 1231 aa9.54□□□□□ -0.88
ITGB1-214ENST00000488427 USP46P62068 366 aa9.54□□□□□ -0.88
ITGB1-214ENST00000488427 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
ITGB1-214ENST00000488427 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
ITGB1-214ENST00000488427 CD46P15529 392 aa9.53□□□□□ -0.88
ITGB1-214ENST00000488427 BLOC1S3Q6QNY0 202 aa9.52□□□□□ -0.89
ITGB1-214ENST00000488427 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
ITGB1-214ENST00000488427 GCGRP47871 477 aa9.51□□□□□ -0.89
ITGB1-214ENST00000488427 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
ITGB1-214ENST00000488427 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
ITGB1-214ENST00000488427 RNF223E7ERA6 249 aa9.49□□□□□ -0.89
ITGB1-214ENST00000488427 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
ITGB1-214ENST00000488427 KDM4AO75164 1064 aa9.49□□□□□ -0.89
ITGB1-214ENST00000488427 SLC10A3P09131 477 aa9.49□□□□□ -0.89
ITGB1-214ENST00000488427 SLC19A1P41440 591 aa9.49□□□□□ -0.89
ITGB1-214ENST00000488427 ZNF787Q6DD87 383 aa9.49□□□□□ -0.89
ITGB1-214ENST00000488427 REPIN1Q9BWE0 567 aaKnown RBP9.48□□□□□ -0.89
ITGB1-214ENST00000488427 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-214ENST00000488427 TLL1O43897 1013 aa9.47□□□□□ -0.89
ITGB1-214ENST00000488427 ATP6V1AP38606 617 aa9.47□□□□□ -0.89
ITGB1-214ENST00000488427 NR1I2O75469 434 aa9.46□□□□□ -0.9
ITGB1-214ENST00000488427 MS4A1P11836 297 aa9.46□□□□□ -0.9
ITGB1-214ENST00000488427 ANKLE1Q8NAG6 615 aa9.46□□□□□ -0.9
ITGB1-214ENST00000488427 Q3C1V9 767 aa9.44□□□□□ -0.9
ITGB1-214ENST00000488427 PKDCCQ504Y2 493 aa9.44□□□□□ -0.9
ITGB1-214ENST00000488427 SPRYD7Q5W111 196 aa9.44□□□□□ -0.9
ITGB1-214ENST00000488427 S1PR4O95977 384 aa9.43□□□□□ -0.9
ITGB1-214ENST00000488427 GJA5P36382 358 aa9.43□□□□□ -0.9
ITGB1-214ENST00000488427 TRIM67Q6ZTA4 783 aa9.43□□□□□ -0.9
ITGB1-214ENST00000488427 ZNF598Q86UK7 904 aaKnown RBP9.43□□□□□ -0.9
ITGB1-214ENST00000488427 FUT2Q10981 343 aa9.42□□□□□ -0.9
ITGB1-214ENST00000488427 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
ITGB1-214ENST00000488427 PPEF1O14829 653 aaPredicted RBP9.41□□□□□ -0.9
ITGB1-214ENST00000488427 ADH1BP00325 375 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms