RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 ANKRD50Q9ULJ7 1429 aa18.87■□□□□ 0.61
HLA-DQB1-209ENST00000487676 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-209ENST00000487676 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
HLA-DQB1-209ENST00000487676 GOLGA6L4A6NEF3 574 aa18.86■□□□□ 0.61
HLA-DQB1-209ENST00000487676 TBC1D32Q96NH3 1257 aa18.86■□□□□ 0.61
HLA-DQB1-209ENST00000487676 DHX29Q7Z478 1369 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-209ENST00000487676 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
HLA-DQB1-209ENST00000487676 LNPKQ9C0E8 428 aa18.85■□□□□ 0.61
HLA-DQB1-209ENST00000487676 FOXD4L5Q5VV16 416 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB1-209ENST00000487676 FOXD4L4Q8WXT5 416 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB1-209ENST00000487676 NRDCO43847 1150 aa18.84■□□□□ 0.61
HLA-DQB1-209ENST00000487676 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.6
HLA-DQB1-209ENST00000487676 KIF16BQ96L93 1317 aa18.83■□□□□ 0.6
HLA-DQB1-209ENST00000487676 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.6
HLA-DQB1-209ENST00000487676 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
HLA-DQB1-209ENST00000487676 ZRSR1Q15695 479 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-209ENST00000487676 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-209ENST00000487676 APBB1O00213 710 aa18.81■□□□□ 0.6
HLA-DQB1-209ENST00000487676 NBPF1Q3BBV0 1214 aa18.81■□□□□ 0.6
HLA-DQB1-209ENST00000487676 DAPK1P53355 1430 aa18.8■□□□□ 0.6
HLA-DQB1-209ENST00000487676 DIAPH3Q9NSV4 1193 aa18.8■□□□□ 0.6
HLA-DQB1-209ENST00000487676 HAP1P54257 671 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB1-209ENST00000487676 K7ELQ4 463 aaPredicted RBP18.79■□□□□ 0.6
HLA-DQB1-209ENST00000487676 TNNT3P45378 269 aaPredicted RBP18.79■□□□□ 0.6
HLA-DQB1-209ENST00000487676 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
HLA-DQB1-209ENST00000487676 IGHDP01880 384 aa18.78■□□□□ 0.6
HLA-DQB1-209ENST00000487676 MBD3O95983 291 aa18.78■□□□□ 0.6
HLA-DQB1-209ENST00000487676 RNF214Q8ND24 703 aa18.78■□□□□ 0.6
HLA-DQB1-209ENST00000487676 KDM2BQ8NHM5 1336 aa18.78■□□□□ 0.6
HLA-DQB1-209ENST00000487676 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
HLA-DQB1-209ENST00000487676 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
HLA-DQB1-209ENST00000487676 TNPO1Q92973 898 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB1-209ENST00000487676 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.59
HLA-DQB1-209ENST00000487676 REC8O95072 547 aa18.75■□□□□ 0.59
HLA-DQB1-209ENST00000487676 PRPF40AO75400 957 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB1-209ENST00000487676 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
HLA-DQB1-209ENST00000487676 CDC45O75419 566 aa18.74■□□□□ 0.59
HLA-DQB1-209ENST00000487676 MVPQ14764 893 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-209ENST00000487676 SASS6Q6UVJ0 657 aa18.74■□□□□ 0.59
HLA-DQB1-209ENST00000487676 RABEP1Q15276 862 aa18.74■□□□□ 0.59
HLA-DQB1-209ENST00000487676 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
HLA-DQB1-209ENST00000487676 DYNC1I1O14576 645 aa18.73■□□□□ 0.59
HLA-DQB1-209ENST00000487676 NOL8Q76FK4 1167 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-209ENST00000487676 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
HLA-DQB1-209ENST00000487676 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB1-209ENST00000487676 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
HLA-DQB1-209ENST00000487676 KANK1Q14678 1352 aa18.71■□□□□ 0.59
HLA-DQB1-209ENST00000487676 OFD1O75665 1012 aa18.71■□□□□ 0.59
HLA-DQB1-209ENST00000487676 INTS3Q68E01 1043 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-209ENST00000487676 CWC22Q9HCG8 908 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-209ENST00000487676 MCM5P33992 734 aa18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 TSPY26PQ9H489 355 aa18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 HMMRO75330 724 aa18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 FOXD4L6Q3SYB3 417 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 FOXD4L3Q6VB84 417 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 PRDM10Q9NQV6 1147 aa18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 CARMIL2Q6F5E8 1435 aa18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 ATP6V1DQ9Y5K8 247 aa18.7■□□□□ 0.58
HLA-DQB1-209ENST00000487676 WDR63Q8IWG1 891 aa18.69■□□□□ 0.58
HLA-DQB1-209ENST00000487676 SEC24BO95487 1268 aa18.69■□□□□ 0.58
HLA-DQB1-209ENST00000487676 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
HLA-DQB1-209ENST00000487676 WWC1Q8IX03 1113 aa18.68■□□□□ 0.58
HLA-DQB1-209ENST00000487676 STAC3Q96MF2 364 aa18.68■□□□□ 0.58
HLA-DQB1-209ENST00000487676 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
HLA-DQB1-209ENST00000487676 CFAP43Q8NDM7 1665 aa18.67■□□□□ 0.58
HLA-DQB1-209ENST00000487676 KCNJ4P48050 445 aa18.67■□□□□ 0.58
HLA-DQB1-209ENST00000487676 TPM3P06753 285 aa18.67■□□□□ 0.58
HLA-DQB1-209ENST00000487676 CCDC66A2RUB6 948 aa18.67■□□□□ 0.58
HLA-DQB1-209ENST00000487676 KLHL40Q2TBA0 621 aa18.67■□□□□ 0.58
HLA-DQB1-209ENST00000487676 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-209ENST00000487676 RARSP54136 660 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB1-209ENST00000487676 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-209ENST00000487676 SRPK2P78362 688 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB1-209ENST00000487676 KIF3AQ9Y496 699 aa18.66■□□□□ 0.58
HLA-DQB1-209ENST00000487676 ABCC5O15440 1437 aa18.65■□□□□ 0.58
HLA-DQB1-209ENST00000487676 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
HLA-DQB1-209ENST00000487676 GCC1Q96CN9 775 aa18.64■□□□□ 0.58
HLA-DQB1-209ENST00000487676 TRIM6-TRIM34B2RNG4 842 aa18.64■□□□□ 0.57
HLA-DQB1-209ENST00000487676 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-209ENST00000487676 SSFA2P28290 1259 aa18.64■□□□□ 0.57
HLA-DQB1-209ENST00000487676 HS1BP3Q53T59 392 aa18.64■□□□□ 0.57
HLA-DQB1-209ENST00000487676 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
HLA-DQB1-209ENST00000487676 RALGAPBQ86X10 1494 aa18.63■□□□□ 0.57
HLA-DQB1-209ENST00000487676 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
HLA-DQB1-209ENST00000487676 TERF1P54274 439 aa18.62■□□□□ 0.57
HLA-DQB1-209ENST00000487676 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
HLA-DQB1-209ENST00000487676 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
HLA-DQB1-209ENST00000487676 EXOSC9Q06265 439 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB1-209ENST00000487676 CBX1P83916 185 aa18.61■□□□□ 0.57
HLA-DQB1-209ENST00000487676 PDCL2Q8N4E4 241 aa18.61■□□□□ 0.57
HLA-DQB1-209ENST00000487676 EPRSP07814 1512 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB1-209ENST00000487676 SMAP1Q8IYB5 467 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-209ENST00000487676 FSD2A1L4K1 749 aa18.6■□□□□ 0.57
HLA-DQB1-209ENST00000487676 SCAPERQ9BY12 1400 aa18.6■□□□□ 0.57
HLA-DQB1-209ENST00000487676 LETM1O95202 739 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-209ENST00000487676 API5Q9BZZ5 524 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-209ENST00000487676 BAG4O95429 457 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-209ENST00000487676 ZNF592Q92610 1267 aa18.59■□□□□ 0.57
HLA-DQB1-209ENST00000487676 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
HLA-DQB1-209ENST00000487676 RIPK4P57078 832 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms