RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 GCC2Q8IWJ2 1684 aa15.07■□□□□ 0
TRA2B-214ENST00000487615 CEP170Q5SW79 1584 aa15.07■□□□□ 0
TRA2B-214ENST00000487615 ADGRL2O95490 1459 aa15.07■□□□□ 0
TRA2B-214ENST00000487615 RAPGEF3O95398 923 aa15.06■□□□□ 0
TRA2B-214ENST00000487615 ITPRIPQ8IWB1 547 aa15.06■□□□□ 0
TRA2B-214ENST00000487615 FANCAO15360 1455 aa15.06■□□□□ 0
TRA2B-214ENST00000487615 RUNDC1Q96C34 613 aa15.05■□□□□ -0
TRA2B-214ENST00000487615 EID1Q9Y6B2 187 aa15.05■□□□□ -0
TRA2B-214ENST00000487615 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
TRA2B-214ENST00000487615 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
TRA2B-214ENST00000487615 CD109Q6YHK3 1445 aa15.04■□□□□ -0
TRA2B-214ENST00000487615 PDE4AP27815 886 aa15.04■□□□□ -0
TRA2B-214ENST00000487615 EIF5BO60841 1220 aaKnown RBP15.04■□□□□ -0
TRA2B-214ENST00000487615 CABP2Q9NPB3 220 aa15.04■□□□□ -0
TRA2B-214ENST00000487615 SLC52A1Q9NWF4 448 aa15.03■□□□□ -0
TRA2B-214ENST00000487615 RPGRIP1LQ68CZ1 1315 aa15.03■□□□□ -0
TRA2B-214ENST00000487615 BCL2L13Q9BXK5 485 aa15.03■□□□□ -0
TRA2B-214ENST00000487615 LMOD2Q6P5Q4 547 aa15.02■□□□□ -0
TRA2B-214ENST00000487615 SLC12A5Q9H2X9 1139 aa15.02■□□□□ -0
TRA2B-214ENST00000487615 RTF1Q92541 710 aaKnown RBP15.02□□□□□ -0.01
TRA2B-214ENST00000487615 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
TRA2B-214ENST00000487615 MTHFSP49914 203 aa15.01□□□□□ -0.01
TRA2B-214ENST00000487615 LMOD3Q0VAK6 560 aa15□□□□□ -0.01
TRA2B-214ENST00000487615 COG6Q9Y2V7 657 aa15□□□□□ -0.01
TRA2B-214ENST00000487615 ARHGEF12Q9NZN5 1544 aa15□□□□□ -0.01
TRA2B-214ENST00000487615 CASC1Q6TDU7 716 aa15□□□□□ -0.01
TRA2B-214ENST00000487615 DIAPH1O60610 1272 aaKnown RBP15□□□□□ -0.01
TRA2B-214ENST00000487615 ANP32BQ92688 251 aaKnown RBP15□□□□□ -0.01
TRA2B-214ENST00000487615 GGNBP2Q9H3C7 697 aa15□□□□□ -0.01
TRA2B-214ENST00000487615 PRAG1Q86YV5 1406 aa15□□□□□ -0.01
TRA2B-214ENST00000487615 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
TRA2B-214ENST00000487615 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
TRA2B-214ENST00000487615 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRA2B-214ENST00000487615 COG3Q96JB2 828 aa14.99□□□□□ -0.01
TRA2B-214ENST00000487615 ABCC2Q92887 1545 aa14.98□□□□□ -0.01
TRA2B-214ENST00000487615 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
TRA2B-214ENST00000487615 ARXQ96QS3 562 aa14.98□□□□□ -0.01
TRA2B-214ENST00000487615 DISP3Q9P2K9 1392 aa14.97□□□□□ -0.01
TRA2B-214ENST00000487615 TRAPPC8Q9Y2L5 1435 aa14.97□□□□□ -0.01
TRA2B-214ENST00000487615 SCAF11Q99590 1463 aaKnown RBP14.97□□□□□ -0.01
TRA2B-214ENST00000487615 TCP11L2Q8N4U5 519 aa14.97□□□□□ -0.01
TRA2B-214ENST00000487615 NGDNQ8NEJ9 315 aaKnown RBP14.97□□□□□ -0.01
TRA2B-214ENST00000487615 ADGRF5Q8IZF2 1346 aa14.96□□□□□ -0.01
TRA2B-214ENST00000487615 FAM161AQ3B820 660 aa14.96□□□□□ -0.01
TRA2B-214ENST00000487615 PAK3O75914 559 aaPredicted RBP14.96□□□□□ -0.02
TRA2B-214ENST00000487615 KDM5BQ9UGL1 1544 aa14.95□□□□□ -0.02
TRA2B-214ENST00000487615 PRAM1Q96QH2 718 aa14.95□□□□□ -0.02
TRA2B-214ENST00000487615 RIPK4P57078 832 aa14.94□□□□□ -0.02
TRA2B-214ENST00000487615 KDM6BO15054 1643 aa14.94□□□□□ -0.02
TRA2B-214ENST00000487615 UHRF1BP1Q6BDS2 1440 aa14.94□□□□□ -0.02
TRA2B-214ENST00000487615 ADGBQ8N7X0 1667 aa14.94□□□□□ -0.02
TRA2B-214ENST00000487615 WDR7Q9Y4E6 1490 aa14.94□□□□□ -0.02
TRA2B-214ENST00000487615 ASXL2Q76L83 1435 aa14.93□□□□□ -0.02
TRA2B-214ENST00000487615 GOLGA6L22H0YM25 854 aa14.92□□□□□ -0.02
TRA2B-214ENST00000487615 DEKP35659 375 aaKnown RBP14.92□□□□□ -0.02
TRA2B-214ENST00000487615 ABCA8O94911 1581 aa14.92□□□□□ -0.02
TRA2B-214ENST00000487615 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
TRA2B-214ENST00000487615 HSCBQ8IWL3 235 aa14.92□□□□□ -0.02
TRA2B-214ENST00000487615 AMPHP49418 695 aa14.91□□□□□ -0.02
TRA2B-214ENST00000487615 NSD3Q9BZ95 1437 aa14.91□□□□□ -0.02
TRA2B-214ENST00000487615 HSP90AB1P08238 724 aaKnown RBP14.9□□□□□ -0.02
TRA2B-214ENST00000487615 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
TRA2B-214ENST00000487615 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
TRA2B-214ENST00000487615 CFAP44Q96MT7 982 aa14.9□□□□□ -0.02
TRA2B-214ENST00000487615 TESK2Q96S53 571 aa14.9□□□□□ -0.02
TRA2B-214ENST00000487615 RTEL1-TNFRSF6BF6WH68 1400 aa14.89□□□□□ -0.03
TRA2B-214ENST00000487615 NOS1P29475 1434 aa14.89□□□□□ -0.03
TRA2B-214ENST00000487615 EIF2AK4Q9P2K8 1649 aaKnown RBP14.89□□□□□ -0.03
TRA2B-214ENST00000487615 PANK1Q8TE04 598 aa14.89□□□□□ -0.03
TRA2B-214ENST00000487615 DDX19BQ9UMR2 479 aa14.89□□□□□ -0.03
TRA2B-214ENST00000487615 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
TRA2B-214ENST00000487615 AAMPQ13685 434 aa14.88□□□□□ -0.03
TRA2B-214ENST00000487615 ARHGEF5Q12774 1597 aa14.88□□□□□ -0.03
TRA2B-214ENST00000487615 STK31Q9BXU1 1019 aa14.88□□□□□ -0.03
TRA2B-214ENST00000487615 ATAD2Q6PL18 1390 aa14.88□□□□□ -0.03
TRA2B-214ENST00000487615 PARD3Q8TEW0 1356 aa14.87□□□□□ -0.03
TRA2B-214ENST00000487615 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
TRA2B-214ENST00000487615 APBB1O00213 710 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 MFAP1P55081 439 aaKnown RBP14.86□□□□□ -0.03
TRA2B-214ENST00000487615 PDE3AQ14432 1141 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 ZNF518AQ6AHZ1 1483 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 A2MP01023 1474 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 SPATA31E1Q6ZUB1 1445 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 SLFN5Q08AF3 891 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 IDI1Q13907 227 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 SLKQ9H2G2 1235 aaPredicted RBP14.86□□□□□ -0.03
TRA2B-214ENST00000487615 HMOX1P09601 288 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 C14orf93Q9H972 538 aaKnown RBP14.86□□□□□ -0.03
TRA2B-214ENST00000487615 CABP1Q9NZU7 370 aa14.86□□□□□ -0.03
TRA2B-214ENST00000487615 BCAR3O75815 825 aa14.85□□□□□ -0.03
TRA2B-214ENST00000487615 SPRYD3Q8NCJ5 442 aa14.85□□□□□ -0.03
TRA2B-214ENST00000487615 OS9Q13438 667 aaPredicted RBP14.84□□□□□ -0.03
TRA2B-214ENST00000487615 WDR63Q8IWG1 891 aa14.84□□□□□ -0.03
TRA2B-214ENST00000487615 GNAI1P63096 354 aa14.83□□□□□ -0.03
TRA2B-214ENST00000487615 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
TRA2B-214ENST00000487615 CHMP4AQ9BY43 222 aa14.83□□□□□ -0.04
TRA2B-214ENST00000487615 LTV1Q96GA3 475 aaPredicted RBP14.82□□□□□ -0.04
TRA2B-214ENST00000487615 HMMRO75330 724 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms