RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.87□□□□□ -0.19
USP34-216ENST00000487547 SOWAHBA6NEL2 793 aa13.85□□□□□ -0.19
USP34-216ENST00000487547 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
USP34-216ENST00000487547 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
USP34-216ENST00000487547 SLF2Q8IX21 1173 aa13.85□□□□□ -0.19
USP34-216ENST00000487547 DAXXQ9UER7 740 aaPredicted RBP13.85□□□□□ -0.19
USP34-216ENST00000487547 TRIM66O15016 1216 aa13.84□□□□□ -0.19
USP34-216ENST00000487547 PLA2G2EQ9NZK7 142 aa13.84□□□□□ -0.19
USP34-216ENST00000487547 CLCN1P35523 988 aa13.83□□□□□ -0.2
USP34-216ENST00000487547 AMHR2Q16671 573 aa13.83□□□□□ -0.2
USP34-216ENST00000487547 SWT1Q5T5J6 900 aaKnown RBP13.83□□□□□ -0.2
USP34-216ENST00000487547 PHOX2BQ99453 314 aa13.83□□□□□ -0.2
USP34-216ENST00000487547 BCAMP50895 628 aa13.81□□□□□ -0.2
USP34-216ENST00000487547 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
USP34-216ENST00000487547 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
USP34-216ENST00000487547 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
USP34-216ENST00000487547 MDM2Q00987 491 aaPredicted RBP13.78□□□□□ -0.2
USP34-216ENST00000487547 PPP4CP60510 307 aa13.77□□□□□ -0.21
USP34-216ENST00000487547 TTLL12Q14166 644 aaPredicted RBP13.77□□□□□ -0.21
USP34-216ENST00000487547 NYAP1Q6ZVC0 841 aa13.77□□□□□ -0.21
USP34-216ENST00000487547 PRKCSHP14314 528 aaPredicted RBP13.75□□□□□ -0.21
USP34-216ENST00000487547 PDE4DQ08499 809 aa13.75□□□□□ -0.21
USP34-216ENST00000487547 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
USP34-216ENST00000487547 RNF40O75150 1001 aa13.74□□□□□ -0.21
USP34-216ENST00000487547 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
USP34-216ENST00000487547 TMUB1Q9BVT8 246 aa13.73□□□□□ -0.21
USP34-216ENST00000487547 PRR14Q9BWN1 585 aa13.73□□□□□ -0.21
USP34-216ENST00000487547 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
USP34-216ENST00000487547 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
USP34-216ENST00000487547 RDH13Q8NBN7 331 aa13.69□□□□□ -0.22
USP34-216ENST00000487547 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
USP34-216ENST00000487547 FAM217BQ9NTX9 383 aaPredicted RBP13.68□□□□□ -0.22
USP34-216ENST00000487547 SSTR3P32745 418 aaPredicted RBP13.67□□□□□ -0.22
USP34-216ENST00000487547 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
USP34-216ENST00000487547 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
USP34-216ENST00000487547 PARP9Q8IXQ6 854 aa13.67□□□□□ -0.22
USP34-216ENST00000487547 SLC10A3P09131 477 aa13.64□□□□□ -0.23
USP34-216ENST00000487547 REPIN1Q9BWE0 567 aaKnown RBP13.64□□□□□ -0.23
USP34-216ENST00000487547 CD46P15529 392 aa13.63□□□□□ -0.23
USP34-216ENST00000487547 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
USP34-216ENST00000487547 GCGRP47871 477 aa13.62□□□□□ -0.23
USP34-216ENST00000487547 CFHP08603 1231 aa13.61□□□□□ -0.23
USP34-216ENST00000487547 ACTN4O43707 911 aaKnown RBP13.59□□□□□ -0.23
USP34-216ENST00000487547 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
USP34-216ENST00000487547 DIXDC1Q155Q3 683 aa13.58□□□□□ -0.24
USP34-216ENST00000487547 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
USP34-216ENST00000487547 KDM4CQ9H3R0 1056 aa13.58□□□□□ -0.24
USP34-216ENST00000487547 APLP1P51693 650 aa13.57□□□□□ -0.24
USP34-216ENST00000487547 USP46P62068 366 aa13.56□□□□□ -0.24
USP34-216ENST00000487547 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
USP34-216ENST00000487547 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
USP34-216ENST00000487547 A0A0G2JS52 829 aa13.54□□□□□ -0.24
USP34-216ENST00000487547 KDM4AO75164 1064 aa13.54□□□□□ -0.24
USP34-216ENST00000487547 MS4A1P11836 297 aa13.54□□□□□ -0.24
USP34-216ENST00000487547 BRPF1P55201 1214 aaPredicted RBP13.54□□□□□ -0.24
USP34-216ENST00000487547 DDRGK1Q96HY6 314 aa13.54□□□□□ -0.24
USP34-216ENST00000487547 GPBP1L1Q9HC44 474 aaPredicted RBP13.53□□□□□ -0.24
USP34-216ENST00000487547 PCDHB3Q9Y5E6 796 aa13.53□□□□□ -0.24
USP34-216ENST00000487547 ATP6V1AP38606 617 aa13.52□□□□□ -0.25
USP34-216ENST00000487547 KCNC4Q03721 635 aa13.49□□□□□ -0.25
USP34-216ENST00000487547 NR1I2O75469 434 aa13.48□□□□□ -0.25
USP34-216ENST00000487547 FUT2Q10981 343 aa13.48□□□□□ -0.25
USP34-216ENST00000487547 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
USP34-216ENST00000487547 IL21Q9HBE4 155 aa13.48□□□□□ -0.25
USP34-216ENST00000487547 TJAP1Q5JTD0 557 aa13.46□□□□□ -0.25
USP34-216ENST00000487547 SPIRE2Q8WWL2 714 aa13.46□□□□□ -0.25
USP34-216ENST00000487547 RGS20O76081 388 aa13.45□□□□□ -0.26
USP34-216ENST00000487547 MTRQ99707 1265 aa13.44□□□□□ -0.26
USP34-216ENST00000487547 TBC1D2Q9BYX2 928 aa13.44□□□□□ -0.26
USP34-216ENST00000487547 GJA5P36382 358 aa13.43□□□□□ -0.26
USP34-216ENST00000487547 MORN1Q5T089 497 aa13.43□□□□□ -0.26
USP34-216ENST00000487547 FAM117AQ9C073 453 aa13.43□□□□□ -0.26
USP34-216ENST00000487547 HOXA2O43364 376 aa13.42□□□□□ -0.26
USP34-216ENST00000487547 BLOC1S3Q6QNY0 202 aa13.42□□□□□ -0.26
USP34-216ENST00000487547 COPS2P61201 443 aa13.41□□□□□ -0.26
USP34-216ENST00000487547 Q3C1V9 767 aa13.41□□□□□ -0.26
USP34-216ENST00000487547 SCUBE3Q8IX30 993 aa13.41□□□□□ -0.26
USP34-216ENST00000487547 PUS10Q3MIT2 529 aaKnown RBP13.4□□□□□ -0.26
USP34-216ENST00000487547 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
USP34-216ENST00000487547 ZPR1O75312 459 aa13.39□□□□□ -0.27
USP34-216ENST00000487547 IL27Q8NEV9 243 aa13.37□□□□□ -0.27
USP34-216ENST00000487547 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
USP34-216ENST00000487547 FDX1P10109 184 aa13.36□□□□□ -0.27
USP34-216ENST00000487547 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
USP34-216ENST00000487547 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
USP34-216ENST00000487547 SPTLC1O15269 473 aa13.35□□□□□ -0.27
USP34-216ENST00000487547 FMNL1O95466 1100 aaPredicted RBP13.35□□□□□ -0.27
USP34-216ENST00000487547 MYSM1Q5VVJ2 828 aa13.35□□□□□ -0.27
USP34-216ENST00000487547 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
USP34-216ENST00000487547 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
USP34-216ENST00000487547 SKIV2LQ15477 1246 aaKnown RBP13.34□□□□□ -0.27
USP34-216ENST00000487547 TUSC1Q2TAM9 212 aa13.34□□□□□ -0.27
USP34-216ENST00000487547 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
USP34-216ENST00000487547 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
USP34-216ENST00000487547 RSBN1LQ6PCB5 846 aaPredicted RBP13.33□□□□□ -0.28
USP34-216ENST00000487547 NDUFV2P19404 249 aa13.32□□□□□ -0.28
USP34-216ENST00000487547 BRICD5Q6PL45 260 aa13.31□□□□□ -0.28
USP34-216ENST00000487547 SPSB2Q99619 263 aa13.3□□□□□ -0.28
USP34-216ENST00000487547 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
USP34-216ENST00000487547 ADH1BP00325 375 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms