RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CHD2O14647 1828 aaKnown RBP19.19■□□□□ 0.66
TRIM56-204ENST00000487252 NUTM2BA6NNL0 878 aaPredicted RBP19.17■□□□□ 0.66
TRIM56-204ENST00000487252 NUTM2EB1AL46 878 aaPredicted RBP19.17■□□□□ 0.66
TRIM56-204ENST00000487252 NUTM2DQ5VT03 806 aaPredicted RBP19.17■□□□□ 0.66
TRIM56-204ENST00000487252 NUTM2AQ8IVF1 878 aaPredicted RBP19.17■□□□□ 0.66
TRIM56-204ENST00000487252 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
TRIM56-204ENST00000487252 EHBP1L1Q8N3D4 1523 aa19.16■□□□□ 0.66
TRIM56-204ENST00000487252 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
TRIM56-204ENST00000487252 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.14■□□□□ 0.65
TRIM56-204ENST00000487252 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
TRIM56-204ENST00000487252 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
TRIM56-204ENST00000487252 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
TRIM56-204ENST00000487252 LRP5O75197 1615 aa19.11■□□□□ 0.65
TRIM56-204ENST00000487252 CADPS2Q86UW7 1296 aa19.11■□□□□ 0.65
TRIM56-204ENST00000487252 IDI1Q13907 227 aa19.1■□□□□ 0.65
TRIM56-204ENST00000487252 BRINP3Q76B58 766 aa19.09■□□□□ 0.65
TRIM56-204ENST00000487252 CCDC125Q86Z20 511 aa19.09■□□□□ 0.65
TRIM56-204ENST00000487252 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
TRIM56-204ENST00000487252 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
TRIM56-204ENST00000487252 C19orf44Q9H6X5 657 aa19.07■□□□□ 0.64
TRIM56-204ENST00000487252 ADGRB3O60242 1522 aa19.06■□□□□ 0.64
TRIM56-204ENST00000487252 C8orf37Q96NL8 207 aa19.06■□□□□ 0.64
TRIM56-204ENST00000487252 NHSL1Q5SYE7 1610 aa19.06■□□□□ 0.64
TRIM56-204ENST00000487252 PLEKHG1Q9ULL1 1385 aa19.05■□□□□ 0.64
TRIM56-204ENST00000487252 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
TRIM56-204ENST00000487252 DUOX2Q9NRD8 1548 aa19.04■□□□□ 0.64
TRIM56-204ENST00000487252 ATF3P18847 181 aa19.03■□□□□ 0.64
TRIM56-204ENST00000487252 ASXL1Q8IXJ9 1541 aa19.03■□□□□ 0.64
TRIM56-204ENST00000487252 LRRC59Q96AG4 307 aaKnown RBP19.01■□□□□ 0.63
TRIM56-204ENST00000487252 TBX22Q9Y458 520 aa19.01■□□□□ 0.63
TRIM56-204ENST00000487252 PNPLA6Q8IY17 1366 aa19.01■□□□□ 0.63
TRIM56-204ENST00000487252 NOS1P29475 1434 aa19■□□□□ 0.63
TRIM56-204ENST00000487252 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
TRIM56-204ENST00000487252 DCCP43146 1447 aa18.99■□□□□ 0.63
TRIM56-204ENST00000487252 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
TRIM56-204ENST00000487252 BCANQ96GW7 911 aa18.96■□□□□ 0.63
TRIM56-204ENST00000487252 ATRNO75882 1429 aa18.96■□□□□ 0.63
TRIM56-204ENST00000487252 ERBINQ96RT1 1412 aa18.96■□□□□ 0.63
TRIM56-204ENST00000487252 PIK3R4Q99570 1358 aa18.95■□□□□ 0.62
TRIM56-204ENST00000487252 TRPC5Q9UL62 973 aaPredicted RBP18.95■□□□□ 0.62
TRIM56-204ENST00000487252 MST1RQ04912 1400 aa18.94■□□□□ 0.62
TRIM56-204ENST00000487252 ADAMTS13Q76LX8 1427 aa18.94■□□□□ 0.62
TRIM56-204ENST00000487252 FNBP4Q8N3X1 1017 aaPredicted RBP18.94■□□□□ 0.62
TRIM56-204ENST00000487252 SLC52A1Q9NWF4 448 aa18.94■□□□□ 0.62
TRIM56-204ENST00000487252 USP21Q9UK80 565 aa18.93■□□□□ 0.62
TRIM56-204ENST00000487252 MYO5BQ9ULV0 1848 aa18.93■□□□□ 0.62
TRIM56-204ENST00000487252 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
TRIM56-204ENST00000487252 RIMS2Q9UQ26 1411 aa18.91■□□□□ 0.62
TRIM56-204ENST00000487252 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
TRIM56-204ENST00000487252 KIF15Q9NS87 1388 aa18.89■□□□□ 0.61
TRIM56-204ENST00000487252 LAMC1P11047 1609 aa18.89■□□□□ 0.61
TRIM56-204ENST00000487252 KANK1Q14678 1352 aa18.88■□□□□ 0.61
TRIM56-204ENST00000487252 PTCH1Q13635 1447 aa18.88■□□□□ 0.61
TRIM56-204ENST00000487252 TMEM131LA2VDJ0 1609 aa18.88■□□□□ 0.61
TRIM56-204ENST00000487252 HDGFP51858 240 aaKnown RBP18.87■□□□□ 0.61
TRIM56-204ENST00000487252 BCL9LQ86UU0 1499 aa18.86■□□□□ 0.61
TRIM56-204ENST00000487252 PTPRUQ92729 1446 aa18.86■□□□□ 0.61
TRIM56-204ENST00000487252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRIM56-204ENST00000487252 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
TRIM56-204ENST00000487252 TRPM2O94759 1503 aa18.85■□□□□ 0.61
TRIM56-204ENST00000487252 DDX17Q92841 729 aaKnown RBP18.85■□□□□ 0.61
TRIM56-204ENST00000487252 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
TRIM56-204ENST00000487252 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
TRIM56-204ENST00000487252 AMOTL2Q9Y2J4 779 aa18.83■□□□□ 0.6
TRIM56-204ENST00000487252 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.6
TRIM56-204ENST00000487252 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.6
TRIM56-204ENST00000487252 HRCP23327 699 aa18.82■□□□□ 0.6
TRIM56-204ENST00000487252 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
TRIM56-204ENST00000487252 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
TRIM56-204ENST00000487252 UNC13BO14795 1591 aa18.81■□□□□ 0.6
TRIM56-204ENST00000487252 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
TRIM56-204ENST00000487252 SPHKAPQ2M3C7 1700 aa18.8■□□□□ 0.6
TRIM56-204ENST00000487252 CROCC2H7BZ55 1655 aa18.8■□□□□ 0.6
TRIM56-204ENST00000487252 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
TRIM56-204ENST00000487252 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
TRIM56-204ENST00000487252 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
TRIM56-204ENST00000487252 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.76■□□□□ 0.59
TRIM56-204ENST00000487252 MARF1Q9Y4F3 1742 aaKnown RBP18.76■□□□□ 0.59
TRIM56-204ENST00000487252 MYOM2P54296 1465 aa18.76■□□□□ 0.59
TRIM56-204ENST00000487252 ABCC5O15440 1437 aa18.75■□□□□ 0.59
TRIM56-204ENST00000487252 ADGRL3Q9HAR2 1447 aa18.75■□□□□ 0.59
TRIM56-204ENST00000487252 BRWD3Q6RI45 1802 aa18.75■□□□□ 0.59
TRIM56-204ENST00000487252 GLI3P10071 1580 aa18.75■□□□□ 0.59
TRIM56-204ENST00000487252 YY1P25490 414 aa18.74■□□□□ 0.59
TRIM56-204ENST00000487252 C1orf167Q5SNV9 1468 aa18.73■□□□□ 0.59
TRIM56-204ENST00000487252 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
TRIM56-204ENST00000487252 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
TRIM56-204ENST00000487252 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
TRIM56-204ENST00000487252 IFFO2Q5TF58 517 aa18.72■□□□□ 0.59
TRIM56-204ENST00000487252 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
TRIM56-204ENST00000487252 SF3B2Q13435 895 aaKnown RBP18.7■□□□□ 0.58
TRIM56-204ENST00000487252 PTPN23Q9H3S7 1636 aa18.66■□□□□ 0.58
TRIM56-204ENST00000487252 SLIT2O94813 1529 aa18.65■□□□□ 0.58
TRIM56-204ENST00000487252 DAPK1P53355 1430 aa18.65■□□□□ 0.58
TRIM56-204ENST00000487252 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
TRIM56-204ENST00000487252 ORAI2Q96SN7 254 aa18.63■□□□□ 0.57
TRIM56-204ENST00000487252 METP08581 1390 aa18.63■□□□□ 0.57
TRIM56-204ENST00000487252 ONECUT3O60422 494 aaPredicted RBP18.62■□□□□ 0.57
TRIM56-204ENST00000487252 ANKRD30AQ9BXX3 1397 aa18.62■□□□□ 0.57
TRIM56-204ENST00000487252 BAG6P46379 1132 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms