RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
UBE4B-209ENST00000487244 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
UBE4B-209ENST00000487244 GCC2Q8IWJ2 1684 aa10.94□□□□□ -0.66
UBE4B-209ENST00000487244 ARHGAP31Q2M1Z3 1444 aa10.93□□□□□ -0.66
UBE4B-209ENST00000487244 POLR1AO95602 1720 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-209ENST00000487244 KANK1Q14678 1352 aa10.92□□□□□ -0.66
UBE4B-209ENST00000487244 TET3O43151 1660 aa10.92□□□□□ -0.66
UBE4B-209ENST00000487244 SYNMO15061 1565 aa10.92□□□□□ -0.66
UBE4B-209ENST00000487244 NLRP1Q9C000 1473 aa10.92□□□□□ -0.66
UBE4B-209ENST00000487244 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
UBE4B-209ENST00000487244 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
UBE4B-209ENST00000487244 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
UBE4B-209ENST00000487244 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
UBE4B-209ENST00000487244 E9PCH4 1651 aa10.91□□□□□ -0.66
UBE4B-209ENST00000487244 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.66
UBE4B-209ENST00000487244 PIK3C2BO00750 1634 aa10.9□□□□□ -0.66
UBE4B-209ENST00000487244 NAIPQ13075 1403 aa10.9□□□□□ -0.66
UBE4B-209ENST00000487244 NEURL4Q96JN8 1562 aa10.9□□□□□ -0.67
UBE4B-209ENST00000487244 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
UBE4B-209ENST00000487244 MYO5BQ9ULV0 1848 aa10.88□□□□□ -0.67
UBE4B-209ENST00000487244 PTPRTO14522 1441 aa10.87□□□□□ -0.67
UBE4B-209ENST00000487244 NOS1P29475 1434 aa10.87□□□□□ -0.67
UBE4B-209ENST00000487244 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
UBE4B-209ENST00000487244 HFM1A2PYH4 1435 aa10.86□□□□□ -0.67
UBE4B-209ENST00000487244 NUP155O75694 1391 aa10.86□□□□□ -0.67
UBE4B-209ENST00000487244 RPRD2Q5VT52 1461 aaKnown RBP10.86□□□□□ -0.67
UBE4B-209ENST00000487244 MIER1Q8N108 512 aa10.85□□□□□ -0.67
UBE4B-209ENST00000487244 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
UBE4B-209ENST00000487244 KDM5AP29375 1690 aaKnown RBP10.84□□□□□ -0.67
UBE4B-209ENST00000487244 LTBP4Q8N2S1 1624 aa10.84□□□□□ -0.67
UBE4B-209ENST00000487244 ADGRB3O60242 1522 aa10.84□□□□□ -0.67
UBE4B-209ENST00000487244 IQGAP1P46940 1657 aa10.83□□□□□ -0.68
UBE4B-209ENST00000487244 PKD2Q13563 968 aa10.83□□□□□ -0.68
UBE4B-209ENST00000487244 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-209ENST00000487244 SPHKAPQ2M3C7 1700 aa10.83□□□□□ -0.68
UBE4B-209ENST00000487244 SLIT1O75093 1534 aa10.83□□□□□ -0.68
UBE4B-209ENST00000487244 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
UBE4B-209ENST00000487244 HAX1O00165 279 aa10.82□□□□□ -0.68
UBE4B-209ENST00000487244 IDI1Q13907 227 aa10.82□□□□□ -0.68
UBE4B-209ENST00000487244 THEMISQ8N1K5 641 aaPredicted RBP10.82□□□□□ -0.68
UBE4B-209ENST00000487244 TMEM131LA2VDJ0 1609 aa10.81□□□□□ -0.68
UBE4B-209ENST00000487244 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
UBE4B-209ENST00000487244 NPHP4O75161 1426 aaPredicted RBP10.81□□□□□ -0.68
UBE4B-209ENST00000487244 ZNF335Q9H4Z2 1342 aaPredicted RBP10.81□□□□□ -0.68
UBE4B-209ENST00000487244 MED14O60244 1454 aa10.81□□□□□ -0.68
UBE4B-209ENST00000487244 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
UBE4B-209ENST00000487244 ILDR1Q86SU0 546 aaPredicted RBP10.8□□□□□ -0.68
UBE4B-209ENST00000487244 STRCP1A6NGW2 1772 aa10.8□□□□□ -0.68
UBE4B-209ENST00000487244 LTKP29376 864 aa10.79□□□□□ -0.68
UBE4B-209ENST00000487244 ANKLE2Q86XL3 938 aa10.79□□□□□ -0.68
UBE4B-209ENST00000487244 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
UBE4B-209ENST00000487244 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
UBE4B-209ENST00000487244 CLTCL1P53675 1640 aa10.78□□□□□ -0.68
UBE4B-209ENST00000487244 TRPM2O94759 1503 aa10.76□□□□□ -0.69
UBE4B-209ENST00000487244 TRIM52Q96A61 297 aa10.76□□□□□ -0.69
UBE4B-209ENST00000487244 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
UBE4B-209ENST00000487244 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
UBE4B-209ENST00000487244 TXNDC2Q86VQ3 553 aa10.75□□□□□ -0.69
UBE4B-209ENST00000487244 FBXO41Q8TF61 875 aa10.74□□□□□ -0.69
UBE4B-209ENST00000487244 KIF1BO60333 1816 aa10.74□□□□□ -0.69
UBE4B-209ENST00000487244 SETD5Q9C0A6 1442 aa10.74□□□□□ -0.69
UBE4B-209ENST00000487244 RIMS2Q9UQ26 1411 aa10.74□□□□□ -0.69
UBE4B-209ENST00000487244 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
UBE4B-209ENST00000487244 EID1Q9Y6B2 187 aa10.72□□□□□ -0.69
UBE4B-209ENST00000487244 RAB3GAP2Q9H2M9 1393 aa10.72□□□□□ -0.69
UBE4B-209ENST00000487244 XIRP1Q702N8 1843 aaKnown RBP10.72□□□□□ -0.69
UBE4B-209ENST00000487244 CPS1P31327 1500 aa10.71□□□□□ -0.69
UBE4B-209ENST00000487244 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
UBE4B-209ENST00000487244 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
UBE4B-209ENST00000487244 NUTM2DQ5VT03 806 aaPredicted RBP10.71□□□□□ -0.69
UBE4B-209ENST00000487244 IQSEC2Q5JU85 1478 aa10.7□□□□□ -0.7
UBE4B-209ENST00000487244 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
UBE4B-209ENST00000487244 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-209ENST00000487244 NRXN3Q9Y4C0 1643 aa10.69□□□□□ -0.7
UBE4B-209ENST00000487244 NEXMIFQ5QGS0 1516 aa10.69□□□□□ -0.7
UBE4B-209ENST00000487244 PLEKHG1Q9ULL1 1385 aa10.69□□□□□ -0.7
UBE4B-209ENST00000487244 SLC26A8Q96RN1 970 aa10.69□□□□□ -0.7
UBE4B-209ENST00000487244 LRRC7Q96NW7 1537 aa10.68□□□□□ -0.7
UBE4B-209ENST00000487244 MPHOSPH9Q99550 1183 aa10.68□□□□□ -0.7
UBE4B-209ENST00000487244 ALKQ9UM73 1620 aa10.68□□□□□ -0.7
UBE4B-209ENST00000487244 NWD1Q149M9 1564 aa10.68□□□□□ -0.7
UBE4B-209ENST00000487244 CHD2O14647 1828 aaKnown RBP10.68□□□□□ -0.7
UBE4B-209ENST00000487244 PPLO60437 1756 aa10.67□□□□□ -0.7
UBE4B-209ENST00000487244 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
UBE4B-209ENST00000487244 CD44P16070 742 aaKnown RBP10.67□□□□□ -0.7
UBE4B-209ENST00000487244 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
UBE4B-209ENST00000487244 DIP2AQ14689 1571 aa10.65□□□□□ -0.7
UBE4B-209ENST00000487244 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.7
UBE4B-209ENST00000487244 IFT172Q9UG01 1749 aa10.65□□□□□ -0.7
UBE4B-209ENST00000487244 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
UBE4B-209ENST00000487244 BCANQ96GW7 911 aa10.65□□□□□ -0.7
UBE4B-209ENST00000487244 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
UBE4B-209ENST00000487244 EVX2Q03828 476 aa10.64□□□□□ -0.71
UBE4B-209ENST00000487244 KLHL34Q8N239 644 aa10.64□□□□□ -0.71
UBE4B-209ENST00000487244 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBE4B-209ENST00000487244 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
UBE4B-209ENST00000487244 UBAP1LF5GYI3 381 aa10.63□□□□□ -0.71
UBE4B-209ENST00000487244 PAK3O75914 559 aaPredicted RBP10.63□□□□□ -0.71
UBE4B-209ENST00000487244 RBM33Q96EV2 1170 aaKnown RBP10.63□□□□□ -0.71
UBE4B-209ENST00000487244 SPATA31E1Q6ZUB1 1445 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms