RNA–Protein interactions for RNA: ENST00000487241.1

TRIM5-210, Transcript of tripartite motif containing 5, humanhuman

TSL 1 (best)

Gene TRIM5, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-210ENST00000487241 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
TRIM5-210ENST00000487241 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
TRIM5-210ENST00000487241 ARHGAP31Q2M1Z3 1444 aa12.1□□□□□ -0.47
TRIM5-210ENST00000487241 RGS17Q9UGC6 210 aaPredicted RBP12.09□□□□□ -0.47
TRIM5-210ENST00000487241 EID1Q9Y6B2 187 aa12.09□□□□□ -0.47
TRIM5-210ENST00000487241 UBR1Q8IWV7 1749 aa12.07□□□□□ -0.48
TRIM5-210ENST00000487241 MED14O60244 1454 aa12.07□□□□□ -0.48
TRIM5-210ENST00000487241 LMTK2Q8IWU2 1503 aa12.06□□□□□ -0.48
TRIM5-210ENST00000487241 VWDEQ8N2E2 1590 aa12.06□□□□□ -0.48
TRIM5-210ENST00000487241 ANKRD50Q9ULJ7 1429 aa12.06□□□□□ -0.48
TRIM5-210ENST00000487241 PPARGC1BQ86YN6 1023 aaKnown RBP12.05□□□□□ -0.48
TRIM5-210ENST00000487241 PROM2Q8N271 834 aa12.05□□□□□ -0.48
TRIM5-210ENST00000487241 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
TRIM5-210ENST00000487241 SETD1AO15047 1707 aaKnown RBP12.04□□□□□ -0.48
TRIM5-210ENST00000487241 LTKP29376 864 aa12.04□□□□□ -0.48
TRIM5-210ENST00000487241 EFCAB6Q5THR3 1501 aa12.04□□□□□ -0.48
TRIM5-210ENST00000487241 LRRC7Q96NW7 1537 aa12.03□□□□□ -0.48
TRIM5-210ENST00000487241 BCANQ96GW7 911 aa12.03□□□□□ -0.48
TRIM5-210ENST00000487241 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
TRIM5-210ENST00000487241 PIK3C2BO00750 1634 aa12.03□□□□□ -0.48
TRIM5-210ENST00000487241 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.48
TRIM5-210ENST00000487241 ITGAEP38570 1179 aa12.02□□□□□ -0.49
TRIM5-210ENST00000487241 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
TRIM5-210ENST00000487241 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
TRIM5-210ENST00000487241 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
TRIM5-210ENST00000487241 ROCK1Q13464 1354 aa12.01□□□□□ -0.49
TRIM5-210ENST00000487241 ARHGAP23Q9P227 1491 aa12.01□□□□□ -0.49
TRIM5-210ENST00000487241 SLIT1O75093 1534 aa12.01□□□□□ -0.49
TRIM5-210ENST00000487241 SYNMO15061 1565 aa12.01□□□□□ -0.49
TRIM5-210ENST00000487241 POTEAQ6S8J7 498 aa12□□□□□ -0.49
TRIM5-210ENST00000487241 PROSER2Q86WR7 435 aaPredicted RBP12□□□□□ -0.49
TRIM5-210ENST00000487241 UNC13BO14795 1591 aa12□□□□□ -0.49
TRIM5-210ENST00000487241 ALKQ9UM73 1620 aa12□□□□□ -0.49
TRIM5-210ENST00000487241 TET3O43151 1660 aa12□□□□□ -0.49
TRIM5-210ENST00000487241 KDM5AP29375 1690 aaKnown RBP12□□□□□ -0.49
TRIM5-210ENST00000487241 SRCAPQ6ZRS2 3230 aa11.99□□□□□ -0.49
TRIM5-210ENST00000487241 IDI1Q13907 227 aa11.99□□□□□ -0.49
TRIM5-210ENST00000487241 NOS1P29475 1434 aa11.99□□□□□ -0.49
TRIM5-210ENST00000487241 RPRD2Q5VT52 1461 aaKnown RBP11.99□□□□□ -0.49
TRIM5-210ENST00000487241 GCC2Q8IWJ2 1684 aa11.98□□□□□ -0.49
TRIM5-210ENST00000487241 TMEM2Q9UHN6 1383 aa11.98□□□□□ -0.49
TRIM5-210ENST00000487241 SLC26A8Q96RN1 970 aa11.98□□□□□ -0.49
TRIM5-210ENST00000487241 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
TRIM5-210ENST00000487241 SLC52A1Q9NWF4 448 aa11.97□□□□□ -0.49
TRIM5-210ENST00000487241 ADGRB3O60242 1522 aa11.96□□□□□ -0.49
TRIM5-210ENST00000487241 KCNA6P17658 529 aa11.96□□□□□ -0.49
TRIM5-210ENST00000487241 STRCP1A6NGW2 1772 aa11.96□□□□□ -0.49
TRIM5-210ENST00000487241 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
TRIM5-210ENST00000487241 IQGAP3Q86VI3 1631 aa11.95□□□□□ -0.5
TRIM5-210ENST00000487241 TMEM94Q12767 1356 aa11.94□□□□□ -0.5
TRIM5-210ENST00000487241 E9PCH4 1651 aa11.94□□□□□ -0.5
TRIM5-210ENST00000487241 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
TRIM5-210ENST00000487241 NUP155O75694 1391 aa11.93□□□□□ -0.5
TRIM5-210ENST00000487241 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
TRIM5-210ENST00000487241 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
TRIM5-210ENST00000487241 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
TRIM5-210ENST00000487241 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
TRIM5-210ENST00000487241 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
TRIM5-210ENST00000487241 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
TRIM5-210ENST00000487241 C14orf37Q86TY3 774 aa11.91□□□□□ -0.5
TRIM5-210ENST00000487241 TMEM131LA2VDJ0 1609 aa11.9□□□□□ -0.5
TRIM5-210ENST00000487241 MSH6P52701 1360 aa11.9□□□□□ -0.5
TRIM5-210ENST00000487241 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM5-210ENST00000487241 SLAIN2Q9P270 581 aa11.89□□□□□ -0.51
TRIM5-210ENST00000487241 ZFYVE9O95405 1425 aa11.88□□□□□ -0.51
TRIM5-210ENST00000487241 RIMS2Q9UQ26 1411 aa11.88□□□□□ -0.51
TRIM5-210ENST00000487241 XIRP1Q702N8 1843 aaKnown RBP11.87□□□□□ -0.51
TRIM5-210ENST00000487241 NAIPQ13075 1403 aa11.86□□□□□ -0.51
TRIM5-210ENST00000487241 SPHKAPQ2M3C7 1700 aa11.86□□□□□ -0.51
TRIM5-210ENST00000487241 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
TRIM5-210ENST00000487241 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRIM5-210ENST00000487241 PLEKHG1Q9ULL1 1385 aa11.86□□□□□ -0.51
TRIM5-210ENST00000487241 MEX3CQ5U5Q3 659 aaKnown RBP11.85□□□□□ -0.51
TRIM5-210ENST00000487241 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
TRIM5-210ENST00000487241 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
TRIM5-210ENST00000487241 ATF3P18847 181 aa11.83□□□□□ -0.52
TRIM5-210ENST00000487241 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
TRIM5-210ENST00000487241 HFM1A2PYH4 1435 aa11.83□□□□□ -0.52
TRIM5-210ENST00000487241 JCADQ9P266 1359 aa11.82□□□□□ -0.52
TRIM5-210ENST00000487241 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
TRIM5-210ENST00000487241 CHD2O14647 1828 aaKnown RBP11.82□□□□□ -0.52
TRIM5-210ENST00000487241 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
TRIM5-210ENST00000487241 DIP2AQ14689 1571 aa11.8□□□□□ -0.52
TRIM5-210ENST00000487241 ZNF326Q5BKZ1 582 aaKnown RBP11.8□□□□□ -0.52
TRIM5-210ENST00000487241 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
TRIM5-210ENST00000487241 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
TRIM5-210ENST00000487241 TRPM2O94759 1503 aa11.8□□□□□ -0.52
TRIM5-210ENST00000487241 CLTCL1P53675 1640 aa11.79□□□□□ -0.52
TRIM5-210ENST00000487241 ADAMTS13Q76LX8 1427 aa11.79□□□□□ -0.52
TRIM5-210ENST00000487241 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
TRIM5-210ENST00000487241 KIF1BO60333 1816 aa11.79□□□□□ -0.52
TRIM5-210ENST00000487241 NUTM2BA6NNL0 878 aaPredicted RBP11.78□□□□□ -0.52
TRIM5-210ENST00000487241 NUTM2EB1AL46 878 aaPredicted RBP11.78□□□□□ -0.52
TRIM5-210ENST00000487241 ZNF772Q68DY9 489 aaPredicted RBP11.78□□□□□ -0.52
TRIM5-210ENST00000487241 NUTM2AQ8IVF1 878 aaPredicted RBP11.78□□□□□ -0.52
TRIM5-210ENST00000487241 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
TRIM5-210ENST00000487241 VASPP50552 380 aaPredicted RBP11.77□□□□□ -0.53
TRIM5-210ENST00000487241 SPATA31A6Q5VVP1 1343 aa11.77□□□□□ -0.53
TRIM5-210ENST00000487241 PIK3R4Q99570 1358 aa11.77□□□□□ -0.53
TRIM5-210ENST00000487241 PHLPP1O60346 1717 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms