RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 CCP110O43303 1012 aa21.33■■□□□ 1
TRAK1-209ENST00000487159 FRAT2O75474 233 aaPredicted RBP21.33■■□□□ 1
TRAK1-209ENST00000487159 CCDC112Q8NEF3 446 aa21.32■■□□□ 1
TRAK1-209ENST00000487159 NAT10Q9H0A0 1025 aaKnown RBP21.32■■□□□ 1
TRAK1-209ENST00000487159 VPS37CA5D8V6 355 aaPredicted RBP21.31■■□□□ 1
TRAK1-209ENST00000487159 AKAP17AQ02040 695 aaKnown RBP21.31■■□□□ 1
TRAK1-209ENST00000487159 CCDC146Q8IYE0 955 aa21.31■■□□□ 1
TRAK1-209ENST00000487159 CAVIN1Q6NZI2 390 aaKnown RBP21.31■■□□□ 1
TRAK1-209ENST00000487159 NEFHP12036 1026 aa21.3■■□□□ 1
TRAK1-209ENST00000487159 CPLX2Q6PUV4 134 aaKnown RBP21.3■■□□□ 1
TRAK1-209ENST00000487159 ESPNB1AK53 854 aa21.3■■□□□ 1
TRAK1-209ENST00000487159 MEX3CQ5U5Q3 659 aaKnown RBP21.3■■□□□ 1
TRAK1-209ENST00000487159 PDILTQ8N807 584 aa21.3■■□□□ 1
TRAK1-209ENST00000487159 ZMYND15Q9H091 742 aa21.3■■□□□ 1
TRAK1-209ENST00000487159 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
TRAK1-209ENST00000487159 ZBED9Q6R2W3 1325 aa21.29■■□□□ 1
TRAK1-209ENST00000487159 EIF3JO75822 258 aaKnown RBP21.29■■□□□ 1
TRAK1-209ENST00000487159 LETM1O95202 739 aaPredicted RBP21.29■■□□□ 1
TRAK1-209ENST00000487159 ZKSCAN1P17029 563 aaPredicted RBP21.29■■□□□ 1
TRAK1-209ENST00000487159 VPS53Q5VIR6 699 aa21.29■■□□□ 1
TRAK1-209ENST00000487159 MYO6Q9UM54 1294 aa21.29■■□□□ 1
TRAK1-209ENST00000487159 SMC3Q9UQE7 1217 aa21.29■■□□□ 1
TRAK1-209ENST00000487159 TSPY26PQ9H489 355 aa21.28■■□□□ 1
TRAK1-209ENST00000487159 C22orf23Q9BZE7 217 aa21.28■■□□□ 1
TRAK1-209ENST00000487159 PRDM10Q9NQV6 1147 aa21.28■■□□□ 1
TRAK1-209ENST00000487159 MBD3O95983 291 aa21.28■■□□□ 1
TRAK1-209ENST00000487159 TRIM29Q14134 588 aa21.28■■□□□ 1
TRAK1-209ENST00000487159 PDCL2Q8N4E4 241 aa21.26■□□□□ 0.99
TRAK1-209ENST00000487159 SPAG9O60271 1321 aaKnown RBP21.26■□□□□ 0.99
TRAK1-209ENST00000487159 CENPHQ9H3R5 247 aa21.26■□□□□ 0.99
TRAK1-209ENST00000487159 TTLL5Q6EMB2 1281 aa21.25■□□□□ 0.99
TRAK1-209ENST00000487159 COG6Q9Y2V7 657 aa21.25■□□□□ 0.99
TRAK1-209ENST00000487159 CGNQ9P2M7 1197 aaKnown RBP21.25■□□□□ 0.99
TRAK1-209ENST00000487159 ERLIN1O75477 346 aa21.24■□□□□ 0.99
TRAK1-209ENST00000487159 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
TRAK1-209ENST00000487159 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
TRAK1-209ENST00000487159 RUFY2Q8WXA3 655 aa21.24■□□□□ 0.99
TRAK1-209ENST00000487159 CALCOCO1Q9P1Z2 691 aa21.24■□□□□ 0.99
TRAK1-209ENST00000487159 DHX37Q8IY37 1157 aaKnown RBP21.24■□□□□ 0.99
TRAK1-209ENST00000487159 GPATCH11Q8N954 259 aa21.24■□□□□ 0.99
TRAK1-209ENST00000487159 SYNE3Q6ZMZ3 975 aa21.23■□□□□ 0.99
TRAK1-209ENST00000487159 GRPEL1Q9HAV7 217 aa21.23■□□□□ 0.99
TRAK1-209ENST00000487159 GOLGA6L10A6NI86 522 aa21.23■□□□□ 0.99
TRAK1-209ENST00000487159 ANO2Q9NQ90 1003 aa21.23■□□□□ 0.99
TRAK1-209ENST00000487159 HDGFL2Q7Z4V5 671 aaPredicted RBP21.23■□□□□ 0.99
TRAK1-209ENST00000487159 PDCL3Q9H2J4 239 aa21.23■□□□□ 0.99
TRAK1-209ENST00000487159 OLFM4Q6UX06 510 aa21.22■□□□□ 0.99
TRAK1-209ENST00000487159 CPLX1O14810 134 aa21.21■□□□□ 0.99
TRAK1-209ENST00000487159 CT47A1Q5JQC4 288 aaPredicted RBP21.21■□□□□ 0.99
TRAK1-209ENST00000487159 CBX1P83916 185 aa21.2■□□□□ 0.98
TRAK1-209ENST00000487159 BCL2L13Q9BXK5 485 aa21.2■□□□□ 0.98
TRAK1-209ENST00000487159 RSPH4AQ5TD94 716 aa21.2■□□□□ 0.98
TRAK1-209ENST00000487159 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
TRAK1-209ENST00000487159 SPC24Q8NBT2 197 aa21.19■□□□□ 0.98
TRAK1-209ENST00000487159 SDF4Q9BRK5 362 aa21.19■□□□□ 0.98
TRAK1-209ENST00000487159 SMC2O95347 1197 aa21.19■□□□□ 0.98
TRAK1-209ENST00000487159 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
TRAK1-209ENST00000487159 PAK3O75914 559 aaPredicted RBP21.18■□□□□ 0.98
TRAK1-209ENST00000487159 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.18■□□□□ 0.98
TRAK1-209ENST00000487159 ZNF330Q9Y3S2 320 aaPredicted RBP21.18■□□□□ 0.98
TRAK1-209ENST00000487159 IPO4Q8TEX9 1081 aaKnown RBP21.18■□□□□ 0.98
TRAK1-209ENST00000487159 BBXQ8WY36 941 aaPredicted RBP21.18■□□□□ 0.98
TRAK1-209ENST00000487159 OFD1O75665 1012 aa21.17■□□□□ 0.98
TRAK1-209ENST00000487159 ZHX1Q9UKY1 873 aaPredicted RBP21.17■□□□□ 0.98
TRAK1-209ENST00000487159 E9PSI1 815 aa21.17■□□□□ 0.98
TRAK1-209ENST00000487159 LMOD3Q0VAK6 560 aa21.17■□□□□ 0.98
TRAK1-209ENST00000487159 INTS3Q68E01 1043 aaKnown RBP21.17■□□□□ 0.98
TRAK1-209ENST00000487159 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
TRAK1-209ENST00000487159 RNF20Q5VTR2 975 aa21.16■□□□□ 0.98
TRAK1-209ENST00000487159 PRPF40AO75400 957 aaKnown RBP21.16■□□□□ 0.98
TRAK1-209ENST00000487159 ROCK2O75116 1388 aaKnown RBP21.16■□□□□ 0.98
TRAK1-209ENST00000487159 MYBBP1AQ9BQG0 1328 aaKnown RBP21.16■□□□□ 0.98
TRAK1-209ENST00000487159 RBM25P49756 843 aaKnown RBP21.15■□□□□ 0.98
TRAK1-209ENST00000487159 ODF2Q5BJF6 829 aa21.15■□□□□ 0.98
TRAK1-209ENST00000487159 DHX8Q14562 1220 aaKnown RBP21.15■□□□□ 0.98
TRAK1-209ENST00000487159 SMARCE1Q969G3 411 aa21.15■□□□□ 0.98
TRAK1-209ENST00000487159 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
TRAK1-209ENST00000487159 GGT6Q6P531 493 aa21.14■□□□□ 0.97
TRAK1-209ENST00000487159 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.97
TRAK1-209ENST00000487159 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
TRAK1-209ENST00000487159 ZSCAN30Q86W11 494 aa21.13■□□□□ 0.97
TRAK1-209ENST00000487159 ERLIN2O94905 339 aa21.13■□□□□ 0.97
TRAK1-209ENST00000487159 CCDC102AQ96A19 550 aa21.13■□□□□ 0.97
TRAK1-209ENST00000487159 TRERF1Q96PN7 1200 aa21.12■□□□□ 0.97
TRAK1-209ENST00000487159 TICAM2Q86XR7 235 aa21.12■□□□□ 0.97
TRAK1-209ENST00000487159 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
TRAK1-209ENST00000487159 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
TRAK1-209ENST00000487159 CLASRPQ8N2M8 674 aaKnown RBP21.1■□□□□ 0.97
TRAK1-209ENST00000487159 LRRCC1Q9C099 1032 aa21.1■□□□□ 0.97
TRAK1-209ENST00000487159 MPNDQ8N594 471 aa21.1■□□□□ 0.97
TRAK1-209ENST00000487159 IBSPP21815 317 aaPredicted RBP21.1■□□□□ 0.97
TRAK1-209ENST00000487159 ENOX2Q16206 610 aaKnown RBP21.1■□□□□ 0.97
TRAK1-209ENST00000487159 RRP7AQ9Y3A4 280 aaKnown RBP21.09■□□□□ 0.97
TRAK1-209ENST00000487159 EIF3AQ14152 1382 aaKnown RBP21.09■□□□□ 0.97
TRAK1-209ENST00000487159 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.09■□□□□ 0.97
TRAK1-209ENST00000487159 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.97
TRAK1-209ENST00000487159 KINO60870 393 aaKnown RBP21.08■□□□□ 0.97
TRAK1-209ENST00000487159 SHTN1A0MZ66 631 aa21.08■□□□□ 0.96
TRAK1-209ENST00000487159 LRRFIP1Q32MZ4 808 aaKnown RBP21.08■□□□□ 0.96
TRAK1-209ENST00000487159 FILIP1LQ4L180 1135 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms