RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 NOL10Q9BSC4 688 aaKnown RBP12.51□□□□□ -0.41
PRDM15-212ENST00000486812 CT47B1P0C2W7 299 aaPredicted RBP12.51□□□□□ -0.41
PRDM15-212ENST00000486812 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
PRDM15-212ENST00000486812 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
PRDM15-212ENST00000486812 H3BQV1 296 aa12.51□□□□□ -0.41
PRDM15-212ENST00000486812 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
PRDM15-212ENST00000486812 WWC1Q8IX03 1113 aa12.51□□□□□ -0.41
PRDM15-212ENST00000486812 PLIN1O60240 522 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 REC8O95072 547 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 TRIM5Q9C035 493 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 TMCO3Q6UWJ1 677 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRDM15-212ENST00000486812 GORABQ5T7V8 394 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 POGKQ9P215 609 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
PRDM15-212ENST00000486812 MYBBP1AQ9BQG0 1328 aaKnown RBP12.5□□□□□ -0.41
PRDM15-212ENST00000486812 TRIM6-TRIM34B2RNG4 842 aa12.49□□□□□ -0.41
PRDM15-212ENST00000486812 FOXD4L6Q3SYB3 417 aaPredicted RBP12.49□□□□□ -0.41
PRDM15-212ENST00000486812 FOXD4L3Q6VB84 417 aaPredicted RBP12.49□□□□□ -0.41
PRDM15-212ENST00000486812 CCDC91Q7Z6B0 441 aa12.49□□□□□ -0.41
PRDM15-212ENST00000486812 APBB1O00213 710 aa12.49□□□□□ -0.41
PRDM15-212ENST00000486812 CIZ1Q9ULV3 898 aaPredicted RBP12.49□□□□□ -0.41
PRDM15-212ENST00000486812 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
PRDM15-212ENST00000486812 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
PRDM15-212ENST00000486812 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
PRDM15-212ENST00000486812 CENPHQ9H3R5 247 aa12.48□□□□□ -0.41
PRDM15-212ENST00000486812 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
PRDM15-212ENST00000486812 NPHP1O15259 732 aa12.48□□□□□ -0.41
PRDM15-212ENST00000486812 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRDM15-212ENST00000486812 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
PRDM15-212ENST00000486812 CEP89Q96ST8 783 aa12.48□□□□□ -0.41
PRDM15-212ENST00000486812 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
PRDM15-212ENST00000486812 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
PRDM15-212ENST00000486812 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
PRDM15-212ENST00000486812 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
PRDM15-212ENST00000486812 BICD2Q8TD16 824 aa12.47□□□□□ -0.41
PRDM15-212ENST00000486812 BAZ1BQ9UIG0 1483 aaKnown RBP12.47□□□□□ -0.41
PRDM15-212ENST00000486812 CREBRFQ8IUR6 639 aa12.47□□□□□ -0.41
PRDM15-212ENST00000486812 ANKRD20A12PQ8NF67 263 aa12.47□□□□□ -0.41
PRDM15-212ENST00000486812 GPATCH3Q96I76 525 aa12.47□□□□□ -0.41
PRDM15-212ENST00000486812 GOLGA6L10A6NI86 522 aa12.47□□□□□ -0.41
PRDM15-212ENST00000486812 NF2P35240 595 aa12.47□□□□□ -0.41
PRDM15-212ENST00000486812 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
PRDM15-212ENST00000486812 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.41
PRDM15-212ENST00000486812 KRT222Q8N1A0 295 aa12.46□□□□□ -0.41
PRDM15-212ENST00000486812 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.42
PRDM15-212ENST00000486812 MNAT1P51948 309 aa12.46□□□□□ -0.42
PRDM15-212ENST00000486812 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
PRDM15-212ENST00000486812 TRIM34Q9BYJ4 488 aa12.45□□□□□ -0.42
PRDM15-212ENST00000486812 HOOK1Q9UJC3 728 aaKnown RBP12.45□□□□□ -0.42
PRDM15-212ENST00000486812 SARNPP82979 210 aaKnown RBP12.45□□□□□ -0.42
PRDM15-212ENST00000486812 SKIDA1Q1XH10 827 aa12.45□□□□□ -0.42
PRDM15-212ENST00000486812 MICALCLQ6ZW33 695 aa12.45□□□□□ -0.42
PRDM15-212ENST00000486812 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
PRDM15-212ENST00000486812 TICAM2Q86XR7 235 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 SPC24Q8NBT2 197 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 IVLP07476 585 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 FILIP1Q7Z7B0 1213 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 CWC22Q9HCG8 908 aaKnown RBP12.44□□□□□ -0.42
PRDM15-212ENST00000486812 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
PRDM15-212ENST00000486812 GBP3Q9H0R5 595 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 FAM193AP78312 1265 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 KIAA1328Q86T90 577 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 UBXN4Q92575 508 aa12.44□□□□□ -0.42
PRDM15-212ENST00000486812 BMS1Q14692 1282 aaKnown RBP12.43□□□□□ -0.42
PRDM15-212ENST00000486812 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
PRDM15-212ENST00000486812 RGL3Q3MIN7 710 aa12.43□□□□□ -0.42
PRDM15-212ENST00000486812 TTC31Q49AM3 519 aaPredicted RBP12.43□□□□□ -0.42
PRDM15-212ENST00000486812 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
PRDM15-212ENST00000486812 RASSF4Q9H2L5 321 aa12.43□□□□□ -0.42
PRDM15-212ENST00000486812 MYO6Q9UM54 1294 aa12.43□□□□□ -0.42
PRDM15-212ENST00000486812 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
PRDM15-212ENST00000486812 MORC1Q86VD1 984 aa12.42□□□□□ -0.42
PRDM15-212ENST00000486812 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
PRDM15-212ENST00000486812 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
PRDM15-212ENST00000486812 CCDC73Q6ZRK6 1079 aa12.42□□□□□ -0.42
PRDM15-212ENST00000486812 CCDC192P0DO97 292 aa12.42□□□□□ -0.42
PRDM15-212ENST00000486812 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
PRDM15-212ENST00000486812 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
PRDM15-212ENST00000486812 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
PRDM15-212ENST00000486812 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
PRDM15-212ENST00000486812 SMC3Q9UQE7 1217 aa12.41□□□□□ -0.42
PRDM15-212ENST00000486812 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
PRDM15-212ENST00000486812 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
PRDM15-212ENST00000486812 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
PRDM15-212ENST00000486812 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRDM15-212ENST00000486812 CPSF2Q9P2I0 782 aaKnown RBP12.41□□□□□ -0.42
PRDM15-212ENST00000486812 ZKSCAN2Q63HK3 967 aa12.4□□□□□ -0.42
PRDM15-212ENST00000486812 ZNF526Q8TF50 670 aaPredicted RBP12.4□□□□□ -0.42
PRDM15-212ENST00000486812 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
PRDM15-212ENST00000486812 ZNF622Q969S3 477 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRDM15-212ENST00000486812 SETSIPP0DME0 302 aa12.4□□□□□ -0.42
PRDM15-212ENST00000486812 WASHC2CQ9Y4E1 1318 aa12.4□□□□□ -0.43
PRDM15-212ENST00000486812 RABEP1Q15276 862 aa12.4□□□□□ -0.43
PRDM15-212ENST00000486812 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.43
PRDM15-212ENST00000486812 TMCO5BA8MYB1 307 aa12.39□□□□□ -0.43
PRDM15-212ENST00000486812 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
PRDM15-212ENST00000486812 FEZ1Q99689 392 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms