RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 KMT5BQ4FZB7 885 aa9.2□□□□□ -0.94
R3HDM1-217ENST00000486532 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
R3HDM1-217ENST00000486532 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
R3HDM1-217ENST00000486532 PCDHB3Q9Y5E6 796 aa9.18□□□□□ -0.94
R3HDM1-217ENST00000486532 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
R3HDM1-217ENST00000486532 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
R3HDM1-217ENST00000486532 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
R3HDM1-217ENST00000486532 TMUB1Q9BVT8 246 aa9.16□□□□□ -0.94
R3HDM1-217ENST00000486532 LCE2BO14633 110 aa9.15□□□□□ -0.94
R3HDM1-217ENST00000486532 GFRA3O60609 400 aa9.15□□□□□ -0.94
R3HDM1-217ENST00000486532 ZPR1O75312 459 aa9.15□□□□□ -0.94
R3HDM1-217ENST00000486532 PPP1R18Q6NYC8 613 aa9.15□□□□□ -0.94
R3HDM1-217ENST00000486532 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.94
R3HDM1-217ENST00000486532 GNPATO15228 680 aa9.14□□□□□ -0.95
R3HDM1-217ENST00000486532 COPS2P61201 443 aa9.14□□□□□ -0.95
R3HDM1-217ENST00000486532 ZNF516Q92618 1163 aa9.14□□□□□ -0.95
R3HDM1-217ENST00000486532 PXYLP1Q8TE99 480 aa9.13□□□□□ -0.95
R3HDM1-217ENST00000486532 ACTN4O43707 911 aaKnown RBP9.12□□□□□ -0.95
R3HDM1-217ENST00000486532 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
R3HDM1-217ENST00000486532 CFHP08603 1231 aa9.11□□□□□ -0.95
R3HDM1-217ENST00000486532 RBM26Q5T8P6 1007 aaKnown RBP9.11□□□□□ -0.95
R3HDM1-217ENST00000486532 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
R3HDM1-217ENST00000486532 NRG2O14511 850 aaPredicted RBP9.1□□□□□ -0.95
R3HDM1-217ENST00000486532 NR1I2O75469 434 aa9.1□□□□□ -0.95
R3HDM1-217ENST00000486532 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
R3HDM1-217ENST00000486532 FAM161AQ3B820 660 aa9.08□□□□□ -0.96
R3HDM1-217ENST00000486532 BLOC1S3Q6QNY0 202 aa9.08□□□□□ -0.96
R3HDM1-217ENST00000486532 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
R3HDM1-217ENST00000486532 DAXXQ9UER7 740 aaPredicted RBP9.07□□□□□ -0.96
R3HDM1-217ENST00000486532 SULF1Q8IWU6 871 aa9.06□□□□□ -0.96
R3HDM1-217ENST00000486532 NKX2-3Q8TAU0 364 aa9.06□□□□□ -0.96
R3HDM1-217ENST00000486532 SLC10A3P09131 477 aa9.04□□□□□ -0.96
R3HDM1-217ENST00000486532 ADH1BP00325 375 aa9.02□□□□□ -0.97
R3HDM1-217ENST00000486532 ANKLE1Q8NAG6 615 aa9.02□□□□□ -0.97
R3HDM1-217ENST00000486532 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
R3HDM1-217ENST00000486532 KDM2AQ9Y2K7 1162 aa9.02□□□□□ -0.97
R3HDM1-217ENST00000486532 GPR37O15354 613 aa9.01□□□□□ -0.97
R3HDM1-217ENST00000486532 GRIPAP1Q4V328 841 aa9□□□□□ -0.97
R3HDM1-217ENST00000486532 ZNF787Q6DD87 383 aa9□□□□□ -0.97
R3HDM1-217ENST00000486532 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
R3HDM1-217ENST00000486532 RNF223E7ERA6 249 aa8.99□□□□□ -0.97
R3HDM1-217ENST00000486532 FECHP22830 423 aa8.99□□□□□ -0.97
R3HDM1-217ENST00000486532 SLC6A16Q9GZN6 736 aa8.99□□□□□ -0.97
R3HDM1-217ENST00000486532 TLL1O43897 1013 aa8.98□□□□□ -0.97
R3HDM1-217ENST00000486532 SLC19A1P41440 591 aa8.98□□□□□ -0.97
R3HDM1-217ENST00000486532 SCUBE3Q8IX30 993 aa8.98□□□□□ -0.97
R3HDM1-217ENST00000486532 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
R3HDM1-217ENST00000486532 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
R3HDM1-217ENST00000486532 S1PR4O95977 384 aa8.96□□□□□ -0.98
R3HDM1-217ENST00000486532 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
R3HDM1-217ENST00000486532 SPSB2Q99619 263 aa8.96□□□□□ -0.98
R3HDM1-217ENST00000486532 GCGRP47871 477 aa8.94□□□□□ -0.98
R3HDM1-217ENST00000486532 ZNF598Q86UK7 904 aaKnown RBP8.94□□□□□ -0.98
R3HDM1-217ENST00000486532 SALL2Q9Y467 1007 aaPredicted RBP8.94□□□□□ -0.98
R3HDM1-217ENST00000486532 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
R3HDM1-217ENST00000486532 FMNL1O95466 1100 aaPredicted RBP8.93□□□□□ -0.98
R3HDM1-217ENST00000486532 PUS10Q3MIT2 529 aaKnown RBP8.93□□□□□ -0.98
R3HDM1-217ENST00000486532 MORN1Q5T089 497 aa8.93□□□□□ -0.98
R3HDM1-217ENST00000486532 SPRYD7Q5W111 196 aa8.93□□□□□ -0.98
R3HDM1-217ENST00000486532 ZNF775Q96BV0 537 aaPredicted RBP8.93□□□□□ -0.98
R3HDM1-217ENST00000486532 FUT2Q10981 343 aa8.92□□□□□ -0.98
R3HDM1-217ENST00000486532 IRF6O14896 467 aa8.9□□□□□ -0.98
R3HDM1-217ENST00000486532 PRR20EP86478 221 aa8.9□□□□□ -0.98
R3HDM1-217ENST00000486532 PRR20CP86479 221 aa8.9□□□□□ -0.98
R3HDM1-217ENST00000486532 PRR20DP86480 221 aa8.9□□□□□ -0.98
R3HDM1-217ENST00000486532 PRR20BP86481 221 aa8.9□□□□□ -0.98
R3HDM1-217ENST00000486532 PRR20AP86496 221 aa8.9□□□□□ -0.98
R3HDM1-217ENST00000486532 Q3C1V9 767 aa8.9□□□□□ -0.98
R3HDM1-217ENST00000486532 PPEF1O14829 653 aaPredicted RBP8.89□□□□□ -0.99
R3HDM1-217ENST00000486532 ZNF697Q5TEC3 545 aa8.89□□□□□ -0.99
R3HDM1-217ENST00000486532 LMOD2Q6P5Q4 547 aa8.89□□□□□ -0.99
R3HDM1-217ENST00000486532 RPIAP49247 311 aa8.88□□□□□ -0.99
R3HDM1-217ENST00000486532 USP46P62068 366 aa8.88□□□□□ -0.99
R3HDM1-217ENST00000486532 PHOX2BQ99453 314 aa8.88□□□□□ -0.99
R3HDM1-217ENST00000486532 PKDCCQ504Y2 493 aa8.87□□□□□ -0.99
R3HDM1-217ENST00000486532 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
R3HDM1-217ENST00000486532 SLC27A5Q9Y2P5 690 aa8.87□□□□□ -0.99
R3HDM1-217ENST00000486532 DGAT1O75907 488 aa8.86□□□□□ -0.99
R3HDM1-217ENST00000486532 CD2BP2O95400 341 aaKnown RBP8.86□□□□□ -0.99
R3HDM1-217ENST00000486532 CD46P15529 392 aa8.86□□□□□ -0.99
R3HDM1-217ENST00000486532 MSS51Q4VC12 460 aa8.86□□□□□ -0.99
R3HDM1-217ENST00000486532 LIAT1Q6ZQX7 453 aa8.86□□□□□ -0.99
R3HDM1-217ENST00000486532 NLRP7Q8WX94 980 aa8.86□□□□□ -0.99
R3HDM1-217ENST00000486532 THAP11Q96EK4 314 aa8.86□□□□□ -0.99
R3HDM1-217ENST00000486532 ZBTB24O43167 697 aaPredicted RBP8.85□□□□□ -0.99
R3HDM1-217ENST00000486532 CLCN1P35523 988 aa8.85□□□□□ -0.99
R3HDM1-217ENST00000486532 KDM4AO75164 1064 aa8.84□□□□□ -0.99
R3HDM1-217ENST00000486532 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
R3HDM1-217ENST00000486532 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
R3HDM1-217ENST00000486532 EMID1Q96A84 441 aaPredicted RBP8.83□□□□□ -1
R3HDM1-217ENST00000486532 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
R3HDM1-217ENST00000486532 FCF1Q9Y324 198 aaKnown RBP8.83□□□□□ -1
R3HDM1-217ENST00000486532 CCDC102AQ96A19 550 aa8.82□□□□□ -1
R3HDM1-217ENST00000486532 GDF9O60383 454 aa8.81□□□□□ -1
R3HDM1-217ENST00000486532 TRIM67Q6ZTA4 783 aa8.81□□□□□ -1
R3HDM1-217ENST00000486532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
R3HDM1-217ENST00000486532 FAM160A2Q8N612 972 aaPredicted RBP8.81□□□□□ -1
R3HDM1-217ENST00000486532 PLA2G2CQ5R387 149 aa8.79□□□□□ -1
R3HDM1-217ENST00000486532 FAM187AA6NFU0 413 aa8.78□□□□□ -1
R3HDM1-217ENST00000486532 NUTM1Q86Y26 1132 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms