RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 JCADQ9P266 1359 aa13.71□□□□□ -0.22
XRN1-212ENST00000486211 SLIT1O75093 1534 aa13.7□□□□□ -0.22
XRN1-212ENST00000486211 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
XRN1-212ENST00000486211 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
XRN1-212ENST00000486211 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
XRN1-212ENST00000486211 PHLPP1O60346 1717 aa13.69□□□□□ -0.22
XRN1-212ENST00000486211 ABCC3O15438 1527 aa13.69□□□□□ -0.22
XRN1-212ENST00000486211 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
XRN1-212ENST00000486211 COL16A1Q07092 1604 aaPredicted RBP13.67□□□□□ -0.22
XRN1-212ENST00000486211 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
XRN1-212ENST00000486211 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
XRN1-212ENST00000486211 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
XRN1-212ENST00000486211 CCDC141Q6ZP82 1450 aa13.64□□□□□ -0.23
XRN1-212ENST00000486211 PRDM15P57071 1507 aaPredicted RBP13.64□□□□□ -0.23
XRN1-212ENST00000486211 KCNA6P17658 529 aa13.63□□□□□ -0.23
XRN1-212ENST00000486211 RBM33Q96EV2 1170 aaKnown RBP13.63□□□□□ -0.23
XRN1-212ENST00000486211 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
XRN1-212ENST00000486211 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
XRN1-212ENST00000486211 RXRBP28702 533 aa13.62□□□□□ -0.23
XRN1-212ENST00000486211 FGD6Q6ZV73 1430 aa13.62□□□□□ -0.23
XRN1-212ENST00000486211 MROH1Q8NDA8 1641 aa13.61□□□□□ -0.23
XRN1-212ENST00000486211 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
XRN1-212ENST00000486211 NWD1Q149M9 1564 aa13.61□□□□□ -0.23
XRN1-212ENST00000486211 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
XRN1-212ENST00000486211 TET3O43151 1660 aa13.6□□□□□ -0.23
XRN1-212ENST00000486211 EVX2Q03828 476 aa13.6□□□□□ -0.23
XRN1-212ENST00000486211 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
XRN1-212ENST00000486211 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
XRN1-212ENST00000486211 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
XRN1-212ENST00000486211 MSH6P52701 1360 aa13.58□□□□□ -0.23
XRN1-212ENST00000486211 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.23
XRN1-212ENST00000486211 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
XRN1-212ENST00000486211 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
XRN1-212ENST00000486211 CEP152O94986 1710 aa13.57□□□□□ -0.24
XRN1-212ENST00000486211 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
XRN1-212ENST00000486211 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
XRN1-212ENST00000486211 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
XRN1-212ENST00000486211 RGS12O14924 1447 aa13.56□□□□□ -0.24
XRN1-212ENST00000486211 AHDC1Q5TGY3 1603 aaPredicted RBP13.56□□□□□ -0.24
XRN1-212ENST00000486211 EIF2AK4Q9P2K8 1649 aaKnown RBP13.55□□□□□ -0.24
XRN1-212ENST00000486211 RSPH4AQ5TD94 716 aa13.55□□□□□ -0.24
XRN1-212ENST00000486211 SLC26A8Q96RN1 970 aa13.55□□□□□ -0.24
XRN1-212ENST00000486211 KDM5AP29375 1690 aaKnown RBP13.55□□□□□ -0.24
XRN1-212ENST00000486211 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
XRN1-212ENST00000486211 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
XRN1-212ENST00000486211 ARHGAP31Q2M1Z3 1444 aa13.54□□□□□ -0.24
XRN1-212ENST00000486211 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
XRN1-212ENST00000486211 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
XRN1-212ENST00000486211 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
XRN1-212ENST00000486211 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
XRN1-212ENST00000486211 AFF2P51816 1311 aa13.52□□□□□ -0.25
XRN1-212ENST00000486211 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
XRN1-212ENST00000486211 MAST1Q9Y2H9 1570 aa13.5□□□□□ -0.25
XRN1-212ENST00000486211 C19orf67A6NJJ6 358 aa13.49□□□□□ -0.25
XRN1-212ENST00000486211 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
XRN1-212ENST00000486211 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
XRN1-212ENST00000486211 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
XRN1-212ENST00000486211 TSPY4P0CV99 314 aa13.47□□□□□ -0.25
XRN1-212ENST00000486211 TSPY10P0CW01 314 aa13.47□□□□□ -0.25
XRN1-212ENST00000486211 RBM6P78332 1123 aaKnown RBP13.47□□□□□ -0.25
XRN1-212ENST00000486211 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
XRN1-212ENST00000486211 CHD2O14647 1828 aaKnown RBP13.47□□□□□ -0.25
XRN1-212ENST00000486211 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
XRN1-212ENST00000486211 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
XRN1-212ENST00000486211 IDI1Q13907 227 aa13.45□□□□□ -0.26
XRN1-212ENST00000486211 QTRT2Q9H974 415 aaKnown RBP13.45□□□□□ -0.26
XRN1-212ENST00000486211 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
XRN1-212ENST00000486211 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
XRN1-212ENST00000486211 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
XRN1-212ENST00000486211 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
XRN1-212ENST00000486211 ADGRB3O60242 1522 aa13.43□□□□□ -0.26
XRN1-212ENST00000486211 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
XRN1-212ENST00000486211 DUOX2Q9NRD8 1548 aa13.42□□□□□ -0.26
XRN1-212ENST00000486211 CADPS2Q86UW7 1296 aa13.41□□□□□ -0.26
XRN1-212ENST00000486211 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
XRN1-212ENST00000486211 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
XRN1-212ENST00000486211 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.26
XRN1-212ENST00000486211 C19orf44Q9H6X5 657 aa13.39□□□□□ -0.27
XRN1-212ENST00000486211 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
XRN1-212ENST00000486211 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
XRN1-212ENST00000486211 NOS1P29475 1434 aa13.39□□□□□ -0.27
XRN1-212ENST00000486211 LMTK2Q8IWU2 1503 aa13.38□□□□□ -0.27
XRN1-212ENST00000486211 ATF3P18847 181 aa13.37□□□□□ -0.27
XRN1-212ENST00000486211 LRP5O75197 1615 aa13.37□□□□□ -0.27
XRN1-212ENST00000486211 PNPLA6Q8IY17 1366 aa13.36□□□□□ -0.27
XRN1-212ENST00000486211 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
XRN1-212ENST00000486211 BCANQ96GW7 911 aa13.36□□□□□ -0.27
XRN1-212ENST00000486211 NGLY1Q96IV0 654 aa13.36□□□□□ -0.27
XRN1-212ENST00000486211 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
XRN1-212ENST00000486211 ERBINQ96RT1 1412 aa13.36□□□□□ -0.27
XRN1-212ENST00000486211 EP400Q96L91 3159 aa13.36□□□□□ -0.27
XRN1-212ENST00000486211 ADAMTS13Q76LX8 1427 aa13.34□□□□□ -0.27
XRN1-212ENST00000486211 KIF15Q9NS87 1388 aa13.33□□□□□ -0.27
XRN1-212ENST00000486211 DCCP43146 1447 aa13.33□□□□□ -0.28
XRN1-212ENST00000486211 CCDC125Q86Z20 511 aa13.33□□□□□ -0.28
XRN1-212ENST00000486211 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
XRN1-212ENST00000486211 MYO5BQ9ULV0 1848 aa13.32□□□□□ -0.28
XRN1-212ENST00000486211 MST1RQ04912 1400 aa13.32□□□□□ -0.28
XRN1-212ENST00000486211 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
XRN1-212ENST00000486211 GABBR2O75899 941 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms