RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 RBM27Q9P2N5 1060 aaKnown RBP8.12□□□□□ -1.11
XPA-203ENST00000485042 A6NJR5 290 aa8.11□□□□□ -1.11
XPA-203ENST00000485042 MCM6Q14566 821 aa8.11□□□□□ -1.11
XPA-203ENST00000485042 RBM46Q8TBY0 533 aaKnown RBP8.11□□□□□ -1.11
XPA-203ENST00000485042 ADAM33Q9BZ11 813 aa8.11□□□□□ -1.11
XPA-203ENST00000485042 PRSS12P56730 875 aa8.1□□□□□ -1.11
XPA-203ENST00000485042 TTC13Q8NBP0 860 aa8.1□□□□□ -1.11
XPA-203ENST00000485042 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
XPA-203ENST00000485042 RGS20O76081 388 aa8.09□□□□□ -1.11
XPA-203ENST00000485042 PSEN2P49810 448 aa8.09□□□□□ -1.11
XPA-203ENST00000485042 MYSM1Q5VVJ2 828 aa8.09□□□□□ -1.11
XPA-203ENST00000485042 TRAK2O60296 914 aa8.08□□□□□ -1.12
XPA-203ENST00000485042 RAD21O60216 631 aa8.07□□□□□ -1.12
XPA-203ENST00000485042 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
XPA-203ENST00000485042 DIXDC1Q155Q3 683 aa8.07□□□□□ -1.12
XPA-203ENST00000485042 STAC3Q96MF2 364 aa8.07□□□□□ -1.12
XPA-203ENST00000485042 TBC1D2Q9BYX2 928 aa8.07□□□□□ -1.12
XPA-203ENST00000485042 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.06□□□□□ -1.12
XPA-203ENST00000485042 IRX2Q9BZI1 471 aaPredicted RBP8.06□□□□□ -1.12
XPA-203ENST00000485042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.05□□□□□ -1.12
XPA-203ENST00000485042 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
XPA-203ENST00000485042 RCCD1A6NED2 376 aa8.04□□□□□ -1.12
XPA-203ENST00000485042 PPP4R3BQ5MIZ7 849 aa8.04□□□□□ -1.12
XPA-203ENST00000485042 PROSER2Q86WR7 435 aaPredicted RBP8.04□□□□□ -1.12
XPA-203ENST00000485042 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
XPA-203ENST00000485042 COL9A1P20849 921 aa8.02□□□□□ -1.13
XPA-203ENST00000485042 RFC5P40937 340 aa8.02□□□□□ -1.13
XPA-203ENST00000485042 PTPN5P54829 565 aa8.02□□□□□ -1.13
XPA-203ENST00000485042 CCDC82Q8N4S0 544 aa8.02□□□□□ -1.13
XPA-203ENST00000485042 POM121Q96HA1 1249 aa8.02□□□□□ -1.13
XPA-203ENST00000485042 FAM198AQ9UFP1 575 aa8.02□□□□□ -1.13
XPA-203ENST00000485042 ZNF777Q9ULD5 760 aaPredicted RBP8.02□□□□□ -1.13
XPA-203ENST00000485042 PTPREP23469 700 aa8.01□□□□□ -1.13
XPA-203ENST00000485042 RIC3Q7Z5B4 369 aa8.01□□□□□ -1.13
XPA-203ENST00000485042 NUTM1Q86Y26 1132 aa8.01□□□□□ -1.13
XPA-203ENST00000485042 SULF1Q8IWU6 871 aa8.01□□□□□ -1.13
XPA-203ENST00000485042 SPIRE2Q8WWL2 714 aa8.01□□□□□ -1.13
XPA-203ENST00000485042 EYA1Q99502 592 aa8.01□□□□□ -1.13
XPA-203ENST00000485042 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
XPA-203ENST00000485042 DDX11L8A8MPP1 907 aa8□□□□□ -1.13
XPA-203ENST00000485042 NBPF26B4DH59 902 aa8□□□□□ -1.13
XPA-203ENST00000485042 PPP1R3GB7ZBB8 358 aa8□□□□□ -1.13
XPA-203ENST00000485042 TMEM259Q4ZIN3 620 aa8□□□□□ -1.13
XPA-203ENST00000485042 NUDT18Q6ZVK8 323 aa8□□□□□ -1.13
XPA-203ENST00000485042 BANK1Q8NDB2 785 aa8□□□□□ -1.13
XPA-203ENST00000485042 BCL2L12Q9HB09 334 aa8□□□□□ -1.13
XPA-203ENST00000485042 LIMD1Q9UGP4 676 aa8□□□□□ -1.13
XPA-203ENST00000485042 A0A0G2JS52 829 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 CD46P15529 392 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 DNAJB2P25686 324 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 KCNH8Q96L42 1107 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 KCNK17Q96T54 332 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 SNRKQ9NRH2 765 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 TSKSQ9UJT2 592 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 PNMA3Q9UL41 463 aa7.99□□□□□ -1.13
XPA-203ENST00000485042 CSPP1Q1MSJ5 1256 aa7.98□□□□□ -1.13
XPA-203ENST00000485042 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
XPA-203ENST00000485042 VPS9D1Q9Y2B5 631 aa7.98□□□□□ -1.13
XPA-203ENST00000485042 PPP2R2DQ66LE6 453 aa7.97□□□□□ -1.13
XPA-203ENST00000485042 FNBP4Q8N3X1 1017 aaPredicted RBP7.97□□□□□ -1.13
XPA-203ENST00000485042 TATDN2Q93075 761 aa7.97□□□□□ -1.13
XPA-203ENST00000485042 COG6Q9Y2V7 657 aa7.97□□□□□ -1.13
XPA-203ENST00000485042 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.14
XPA-203ENST00000485042 SPTLC1O15269 473 aa7.96□□□□□ -1.14
XPA-203ENST00000485042 FBXO31Q5XUX0 539 aaPredicted RBP7.96□□□□□ -1.14
XPA-203ENST00000485042 RSBN1LQ6PCB5 846 aaPredicted RBP7.96□□□□□ -1.14
XPA-203ENST00000485042 RDH13Q8NBN7 331 aa7.96□□□□□ -1.14
XPA-203ENST00000485042 CCDC97Q96F63 343 aaPredicted RBP7.96□□□□□ -1.14
XPA-203ENST00000485042 C3orf80F5H4A9 247 aa7.95□□□□□ -1.14
XPA-203ENST00000485042 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
XPA-203ENST00000485042 TUSC1Q2TAM9 212 aa7.95□□□□□ -1.14
XPA-203ENST00000485042 THSD4Q6ZMP0 1018 aa7.95□□□□□ -1.14
XPA-203ENST00000485042 TMEM134Q9H6X4 195 aa7.95□□□□□ -1.14
XPA-203ENST00000485042 MOXD2PA6NHM9 499 aa7.94□□□□□ -1.14
XPA-203ENST00000485042 PDIA4P13667 645 aaKnown RBP7.94□□□□□ -1.14
XPA-203ENST00000485042 SERPINA10Q9UK55 444 aa7.94□□□□□ -1.14
XPA-203ENST00000485042 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
XPA-203ENST00000485042 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
XPA-203ENST00000485042 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
XPA-203ENST00000485042 SMAPO00193 183 aa7.93□□□□□ -1.14
XPA-203ENST00000485042 NDUFV2P19404 249 aa7.93□□□□□ -1.14
XPA-203ENST00000485042 NUTM2DQ5VT03 806 aaPredicted RBP7.93□□□□□ -1.14
XPA-203ENST00000485042 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
XPA-203ENST00000485042 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
XPA-203ENST00000485042 SLC4A5Q9BY07 1137 aa7.93□□□□□ -1.14
XPA-203ENST00000485042 BHMG1C9JSJ3 638 aaPredicted RBP7.92□□□□□ -1.14
XPA-203ENST00000485042 AP1G2O75843 785 aa7.92□□□□□ -1.14
XPA-203ENST00000485042 GJA5P36382 358 aa7.92□□□□□ -1.14
XPA-203ENST00000485042 QPCTQ16769 361 aa7.92□□□□□ -1.14
XPA-203ENST00000485042 PROX2Q3B8N5 592 aa7.92□□□□□ -1.14
XPA-203ENST00000485042 GDPD2Q9HCC8 539 aa7.92□□□□□ -1.14
XPA-203ENST00000485042 PRM3Q9NNZ6 103 aa7.92□□□□□ -1.14
XPA-203ENST00000485042 KDM4AO75164 1064 aa7.91□□□□□ -1.14
XPA-203ENST00000485042 RSPH4AQ5TD94 716 aa7.91□□□□□ -1.14
XPA-203ENST00000485042 MTMR14Q8NCE2 650 aa7.91□□□□□ -1.14
XPA-203ENST00000485042 LILRB3O75022 631 aa7.9□□□□□ -1.14
XPA-203ENST00000485042 PCDHB15Q9Y5E8 787 aa7.9□□□□□ -1.14
XPA-203ENST00000485042 GOLGA8CPA6NN73 597 aa7.89□□□□□ -1.15
XPA-203ENST00000485042 ABL2P42684 1182 aa7.89□□□□□ -1.15
XPA-203ENST00000485042 RTL5Q5HYW3 569 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 366.4 ms