RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 ZBTB22O15209 634 aa12.15□□□□□ -0.46
SND1-211ENST00000484767 U3KPZ7 1027 aaPredicted RBP12.15□□□□□ -0.46
SND1-211ENST00000484767 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.46
SND1-211ENST00000484767 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
SND1-211ENST00000484767 EXOC6Q8TAG9 804 aa12.14□□□□□ -0.47
SND1-211ENST00000484767 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
SND1-211ENST00000484767 TESK2Q96S53 571 aa12.14□□□□□ -0.47
SND1-211ENST00000484767 TRPM2O94759 1503 aa12.14□□□□□ -0.47
SND1-211ENST00000484767 DEPDC5O75140 1603 aa12.14□□□□□ -0.47
SND1-211ENST00000484767 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
SND1-211ENST00000484767 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
SND1-211ENST00000484767 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
SND1-211ENST00000484767 DISP3Q9P2K9 1392 aa12.13□□□□□ -0.47
SND1-211ENST00000484767 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
SND1-211ENST00000484767 ABCC1P33527 1531 aa12.12□□□□□ -0.47
SND1-211ENST00000484767 PPM1GO15355 546 aaPredicted RBP12.12□□□□□ -0.47
SND1-211ENST00000484767 PDE4AP27815 886 aa12.12□□□□□ -0.47
SND1-211ENST00000484767 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
SND1-211ENST00000484767 TET3O43151 1660 aa12.12□□□□□ -0.47
SND1-211ENST00000484767 KDM5AP29375 1690 aaKnown RBP12.12□□□□□ -0.47
SND1-211ENST00000484767 RTEL1-TNFRSF6BF6WH68 1400 aa12.11□□□□□ -0.47
SND1-211ENST00000484767 MYOM1P52179 1685 aa12.11□□□□□ -0.47
SND1-211ENST00000484767 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
SND1-211ENST00000484767 FBLN2P98095 1184 aa12.11□□□□□ -0.47
SND1-211ENST00000484767 ASXL1Q8IXJ9 1541 aa12.11□□□□□ -0.47
SND1-211ENST00000484767 UHRF1BP1LA0JNW5 1464 aa12.1□□□□□ -0.47
SND1-211ENST00000484767 WDR7Q9Y4E6 1490 aa12.1□□□□□ -0.47
SND1-211ENST00000484767 VIRMAQ69YN4 1812 aaKnown RBP12.1□□□□□ -0.47
SND1-211ENST00000484767 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
SND1-211ENST00000484767 PLCH2O75038 1416 aa12.1□□□□□ -0.47
SND1-211ENST00000484767 SCAF11Q99590 1463 aaKnown RBP12.09□□□□□ -0.47
SND1-211ENST00000484767 C1QBPQ07021 282 aaKnown RBP12.08□□□□□ -0.48
SND1-211ENST00000484767 NBPF1Q3BBV0 1214 aa12.08□□□□□ -0.48
SND1-211ENST00000484767 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
SND1-211ENST00000484767 PANK3Q9H999 370 aa12.08□□□□□ -0.48
SND1-211ENST00000484767 PTPRTO14522 1441 aa12.08□□□□□ -0.48
SND1-211ENST00000484767 ZCCHC11Q5TAX3 1644 aaKnown RBP12.08□□□□□ -0.48
SND1-211ENST00000484767 CNGB1Q14028 1251 aaPredicted RBP12.07□□□□□ -0.48
SND1-211ENST00000484767 VWDEQ8N2E2 1590 aa12.07□□□□□ -0.48
SND1-211ENST00000484767 MYO3AQ8NEV4 1616 aa12.07□□□□□ -0.48
SND1-211ENST00000484767 CENPQQ7L2Z9 268 aaPredicted RBP12.06□□□□□ -0.48
SND1-211ENST00000484767 CLTCL1P53675 1640 aa12.06□□□□□ -0.48
SND1-211ENST00000484767 IFT172Q9UG01 1749 aa12.06□□□□□ -0.48
SND1-211ENST00000484767 NBR1Q14596 966 aa12.05□□□□□ -0.48
SND1-211ENST00000484767 KDM2BQ8NHM5 1336 aa12.05□□□□□ -0.48
SND1-211ENST00000484767 ZNF521Q96K83 1311 aa12.05□□□□□ -0.48
SND1-211ENST00000484767 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
SND1-211ENST00000484767 KIF1BO60333 1816 aa12.04□□□□□ -0.48
SND1-211ENST00000484767 MYOM2P54296 1465 aa12.04□□□□□ -0.48
SND1-211ENST00000484767 EFCAB2Q5VUJ9 269 aa12.04□□□□□ -0.48
SND1-211ENST00000484767 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
SND1-211ENST00000484767 ZFYVE16Q7Z3T8 1539 aa12.04□□□□□ -0.48
SND1-211ENST00000484767 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
SND1-211ENST00000484767 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
SND1-211ENST00000484767 CC2D1BQ5T0F9 858 aaKnown RBP12.03□□□□□ -0.48
SND1-211ENST00000484767 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
SND1-211ENST00000484767 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
SND1-211ENST00000484767 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
SND1-211ENST00000484767 MAP3K4Q9Y6R4 1608 aa12.03□□□□□ -0.48
SND1-211ENST00000484767 PPP2R1AP30153 589 aa12.02□□□□□ -0.49
SND1-211ENST00000484767 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
SND1-211ENST00000484767 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
SND1-211ENST00000484767 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
SND1-211ENST00000484767 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
SND1-211ENST00000484767 DUSP27Q5VZP5 1158 aa12□□□□□ -0.49
SND1-211ENST00000484767 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
SND1-211ENST00000484767 KANK1Q14678 1352 aa12□□□□□ -0.49
SND1-211ENST00000484767 SETBP1Q9Y6X0 1596 aa12□□□□□ -0.49
SND1-211ENST00000484767 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
SND1-211ENST00000484767 SBNO2Q9Y2G9 1366 aa11.99□□□□□ -0.49
SND1-211ENST00000484767 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
SND1-211ENST00000484767 USP32Q8NFA0 1604 aa11.99□□□□□ -0.49
SND1-211ENST00000484767 ABCA6Q8N139 1617 aa11.98□□□□□ -0.49
SND1-211ENST00000484767 PLEKHH1Q9ULM0 1364 aa11.98□□□□□ -0.49
SND1-211ENST00000484767 SLFN5Q08AF3 891 aa11.98□□□□□ -0.49
SND1-211ENST00000484767 AAMPQ13685 434 aa11.98□□□□□ -0.49
SND1-211ENST00000484767 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
SND1-211ENST00000484767 ZC3H13Q5T200 1668 aaKnown RBP11.97□□□□□ -0.49
SND1-211ENST00000484767 ATP7AQ04656 1500 aa11.97□□□□□ -0.49
SND1-211ENST00000484767 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
SND1-211ENST00000484767 NPM2Q86SE8 214 aaKnown RBP11.97□□□□□ -0.49
SND1-211ENST00000484767 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
SND1-211ENST00000484767 NRXN1Q9ULB1 1477 aa11.96□□□□□ -0.49
SND1-211ENST00000484767 TRAPPC8Q9Y2L5 1435 aa11.96□□□□□ -0.49
SND1-211ENST00000484767 NEFMP07197 916 aa11.96□□□□□ -0.49
SND1-211ENST00000484767 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.5
SND1-211ENST00000484767 E9PSI1 815 aa11.95□□□□□ -0.5
SND1-211ENST00000484767 POLR3AO14802 1390 aaPredicted RBP11.94□□□□□ -0.5
SND1-211ENST00000484767 MROH1Q8NDA8 1641 aa11.94□□□□□ -0.5
SND1-211ENST00000484767 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
SND1-211ENST00000484767 ERCC6L2Q5T890 1561 aa11.94□□□□□ -0.5
SND1-211ENST00000484767 PLIN1O60240 522 aa11.94□□□□□ -0.5
SND1-211ENST00000484767 EFCAB6Q5THR3 1501 aa11.94□□□□□ -0.5
SND1-211ENST00000484767 ERVK-7P63135 1459 aa11.94□□□□□ -0.5
SND1-211ENST00000484767 CGNL1Q0VF96 1302 aa11.93□□□□□ -0.5
SND1-211ENST00000484767 CACNB1Q02641 598 aaPredicted RBP11.93□□□□□ -0.5
SND1-211ENST00000484767 PDE3AQ14432 1141 aa11.93□□□□□ -0.5
SND1-211ENST00000484767 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
SND1-211ENST00000484767 FANCAO15360 1455 aa11.93□□□□□ -0.5
SND1-211ENST00000484767 SHPRHQ149N8 1683 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms