RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
PDZRN3-209ENST00000484487 NOS1P29475 1434 aa9.39□□□□□ -0.91
PDZRN3-209ENST00000484487 KDM5AP29375 1690 aaKnown RBP9.39□□□□□ -0.91
PDZRN3-209ENST00000484487 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
PDZRN3-209ENST00000484487 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
PDZRN3-209ENST00000484487 SYNMO15061 1565 aa9.38□□□□□ -0.91
PDZRN3-209ENST00000484487 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
PDZRN3-209ENST00000484487 SIN3AQ96ST3 1273 aa9.38□□□□□ -0.91
PDZRN3-209ENST00000484487 SLC52A1Q9NWF4 448 aa9.38□□□□□ -0.91
PDZRN3-209ENST00000484487 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
PDZRN3-209ENST00000484487 MKRN4PQ13434 485 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-209ENST00000484487 IFT172Q9UG01 1749 aa9.36□□□□□ -0.91
PDZRN3-209ENST00000484487 STAC3Q96MF2 364 aa9.35□□□□□ -0.91
PDZRN3-209ENST00000484487 PPLO60437 1756 aa9.35□□□□□ -0.91
PDZRN3-209ENST00000484487 POTEHQ6S545 545 aa9.34□□□□□ -0.91
PDZRN3-209ENST00000484487 TNRQ92752 1358 aa9.34□□□□□ -0.91
PDZRN3-209ENST00000484487 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
PDZRN3-209ENST00000484487 NLRP1Q9C000 1473 aa9.34□□□□□ -0.91
PDZRN3-209ENST00000484487 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
PDZRN3-209ENST00000484487 ADGRB3O60242 1522 aa9.33□□□□□ -0.92
PDZRN3-209ENST00000484487 FBXO31Q5XUX0 539 aaPredicted RBP9.33□□□□□ -0.92
PDZRN3-209ENST00000484487 UBR1Q8IWV7 1749 aa9.33□□□□□ -0.92
PDZRN3-209ENST00000484487 SPATA31E1Q6ZUB1 1445 aa9.32□□□□□ -0.92
PDZRN3-209ENST00000484487 MYO3AQ8NEV4 1616 aa9.32□□□□□ -0.92
PDZRN3-209ENST00000484487 RPGRIP1LQ68CZ1 1315 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 SPDYE2BA6NHP3 402 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 SPDYE6P0CI01 402 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 IDI1Q13907 227 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 SPDYE2Q495Y8 402 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 L3MBTL2Q969R5 705 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 STAG3Q9UJ98 1225 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 PTPRMP28827 1452 aa9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 ZNF142P52746 1687 aaPredicted RBP9.31□□□□□ -0.92
PDZRN3-209ENST00000484487 PPP1R15AO75807 674 aaPredicted RBP9.3□□□□□ -0.92
PDZRN3-209ENST00000484487 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
PDZRN3-209ENST00000484487 CEBPAP49715 358 aaPredicted RBP9.3□□□□□ -0.92
PDZRN3-209ENST00000484487 CHRDL2Q6WN34 429 aa9.3□□□□□ -0.92
PDZRN3-209ENST00000484487 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
PDZRN3-209ENST00000484487 KIAA1210Q9ULL0 1709 aa9.3□□□□□ -0.92
PDZRN3-209ENST00000484487 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
PDZRN3-209ENST00000484487 RGL3Q3MIN7 710 aa9.29□□□□□ -0.92
PDZRN3-209ENST00000484487 ZNF326Q5BKZ1 582 aaKnown RBP9.29□□□□□ -0.92
PDZRN3-209ENST00000484487 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
PDZRN3-209ENST00000484487 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
PDZRN3-209ENST00000484487 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
PDZRN3-209ENST00000484487 UHRF1BP1Q6BDS2 1440 aa9.28□□□□□ -0.92
PDZRN3-209ENST00000484487 CEP170BQ9Y4F5 1589 aaPredicted RBP9.28□□□□□ -0.92
PDZRN3-209ENST00000484487 A2ML1A8K2U0 1454 aa9.28□□□□□ -0.92
PDZRN3-209ENST00000484487 MYOM2P54296 1465 aa9.28□□□□□ -0.92
PDZRN3-209ENST00000484487 LAMC1P11047 1609 aa9.27□□□□□ -0.92
PDZRN3-209ENST00000484487 NEXMIFQ5QGS0 1516 aa9.27□□□□□ -0.93
PDZRN3-209ENST00000484487 TRPM1Q7Z4N2 1603 aa9.27□□□□□ -0.93
PDZRN3-209ENST00000484487 ZFYVE9O95405 1425 aa9.26□□□□□ -0.93
PDZRN3-209ENST00000484487 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-209ENST00000484487 THEMISQ8N1K5 641 aaPredicted RBP9.26□□□□□ -0.93
PDZRN3-209ENST00000484487 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
PDZRN3-209ENST00000484487 KDM2AQ9Y2K7 1162 aa9.26□□□□□ -0.93
PDZRN3-209ENST00000484487 PRAG1Q86YV5 1406 aa9.24□□□□□ -0.93
PDZRN3-209ENST00000484487 KDM4FA0A1W2PPD8 638 aa9.24□□□□□ -0.93
PDZRN3-209ENST00000484487 POLR1AO95602 1720 aaPredicted RBP9.24□□□□□ -0.93
PDZRN3-209ENST00000484487 SLIT1O75093 1534 aa9.24□□□□□ -0.93
PDZRN3-209ENST00000484487 RIMS2Q9UQ26 1411 aa9.23□□□□□ -0.93
PDZRN3-209ENST00000484487 RALGAPBQ86X10 1494 aa9.23□□□□□ -0.93
PDZRN3-209ENST00000484487 NRXN1Q9ULB1 1477 aa9.23□□□□□ -0.93
PDZRN3-209ENST00000484487 TMEM2Q9UHN6 1383 aa9.23□□□□□ -0.93
PDZRN3-209ENST00000484487 EID1Q9Y6B2 187 aa9.22□□□□□ -0.93
PDZRN3-209ENST00000484487 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.93
PDZRN3-209ENST00000484487 SETBP1Q9Y6X0 1596 aa9.21□□□□□ -0.93
PDZRN3-209ENST00000484487 PIK3C2GO75747 1445 aa9.21□□□□□ -0.94
PDZRN3-209ENST00000484487 IQGAP1P46940 1657 aa9.2□□□□□ -0.94
PDZRN3-209ENST00000484487 PITPNM1O00562 1244 aa9.2□□□□□ -0.94
PDZRN3-209ENST00000484487 NBPF8Q3BBV2 869 aa9.2□□□□□ -0.94
PDZRN3-209ENST00000484487 ADGRF5Q8IZF2 1346 aa9.2□□□□□ -0.94
PDZRN3-209ENST00000484487 TXNDC2Q86VQ3 553 aa9.19□□□□□ -0.94
PDZRN3-209ENST00000484487 ROCK2O75116 1388 aaKnown RBP9.19□□□□□ -0.94
PDZRN3-209ENST00000484487 SETD1AO15047 1707 aaKnown RBP9.19□□□□□ -0.94
PDZRN3-209ENST00000484487 DIP2AQ14689 1571 aa9.18□□□□□ -0.94
PDZRN3-209ENST00000484487 ANKLE2Q86XL3 938 aa9.18□□□□□ -0.94
PDZRN3-209ENST00000484487 SCAF11Q99590 1463 aaKnown RBP9.18□□□□□ -0.94
PDZRN3-209ENST00000484487 C14orf93Q9H972 538 aaKnown RBP9.18□□□□□ -0.94
PDZRN3-209ENST00000484487 PLEKHG1Q9ULL1 1385 aa9.18□□□□□ -0.94
PDZRN3-209ENST00000484487 ALKQ9UM73 1620 aa9.18□□□□□ -0.94
PDZRN3-209ENST00000484487 NRXN3Q9Y4C0 1643 aa9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 GPRASP1Q5JY77 1395 aa9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 EIF4G2P78344 907 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 NUTM2DQ5VT03 806 aaPredicted RBP9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 BCANQ96GW7 911 aa9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 CARD11Q9BXL7 1154 aa9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 SSUH2Q9Y2M2 353 aa9.17□□□□□ -0.94
PDZRN3-209ENST00000484487 CFAP70Q5T0N1 1121 aa9.16□□□□□ -0.94
PDZRN3-209ENST00000484487 KNDC1Q76NI1 1749 aa9.16□□□□□ -0.94
PDZRN3-209ENST00000484487 EIF3AQ14152 1382 aaKnown RBP9.15□□□□□ -0.94
PDZRN3-209ENST00000484487 LTKP29376 864 aa9.15□□□□□ -0.94
PDZRN3-209ENST00000484487 MED14O60244 1454 aa9.15□□□□□ -0.95
PDZRN3-209ENST00000484487 CHD2O14647 1828 aaKnown RBP9.15□□□□□ -0.95
PDZRN3-209ENST00000484487 ARHGEF28Q8N1W1 1705 aaKnown RBP9.14□□□□□ -0.95
PDZRN3-209ENST00000484487 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
PDZRN3-209ENST00000484487 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
PDZRN3-209ENST00000484487 ADGRB1O14514 1584 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms