RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 LOC105371045A0A1W2PR82 267 aa9.67□□□□□ -0.86
PTCD3-215ENST00000484203 POTEMA6NI47 508 aa9.66□□□□□ -0.86
PTCD3-215ENST00000484203 PPP1R37O75864 691 aa9.66□□□□□ -0.86
PTCD3-215ENST00000484203 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTCD3-215ENST00000484203 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
PTCD3-215ENST00000484203 ADAMTSL3P82987 1691 aa9.66□□□□□ -0.86
PTCD3-215ENST00000484203 ABCC1P33527 1531 aa9.66□□□□□ -0.86
PTCD3-215ENST00000484203 EHBP1L1Q8N3D4 1523 aa9.66□□□□□ -0.86
PTCD3-215ENST00000484203 G3V3G9 751 aa9.65□□□□□ -0.86
PTCD3-215ENST00000484203 SLAIN1Q8ND83 568 aa9.65□□□□□ -0.86
PTCD3-215ENST00000484203 FAM163AQ96GL9 167 aaPredicted RBP9.65□□□□□ -0.86
PTCD3-215ENST00000484203 L3MBTL3Q96JM7 780 aaPredicted RBP9.65□□□□□ -0.86
PTCD3-215ENST00000484203 AGLP35573 1532 aa9.65□□□□□ -0.86
PTCD3-215ENST00000484203 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.87
PTCD3-215ENST00000484203 PREX2Q70Z35 1606 aa9.64□□□□□ -0.87
PTCD3-215ENST00000484203 REREQ9P2R6 1566 aa9.64□□□□□ -0.87
PTCD3-215ENST00000484203 TSPY4P0CV99 314 aa9.64□□□□□ -0.87
PTCD3-215ENST00000484203 TSPY10P0CW01 314 aa9.64□□□□□ -0.87
PTCD3-215ENST00000484203 POTEGQ6S5H5 508 aa9.64□□□□□ -0.87
PTCD3-215ENST00000484203 ARHGEF12Q9NZN5 1544 aa9.64□□□□□ -0.87
PTCD3-215ENST00000484203 BCORL1Q5H9F3 1711 aa9.64□□□□□ -0.87
PTCD3-215ENST00000484203 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
PTCD3-215ENST00000484203 MAP3K1Q13233 1512 aa9.63□□□□□ -0.87
PTCD3-215ENST00000484203 RTEL1-TNFRSF6BF6WH68 1400 aa9.63□□□□□ -0.87
PTCD3-215ENST00000484203 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
PTCD3-215ENST00000484203 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
PTCD3-215ENST00000484203 MADDQ8WXG6 1647 aa9.6□□□□□ -0.87
PTCD3-215ENST00000484203 NCOA2Q15596 1464 aa9.6□□□□□ -0.87
PTCD3-215ENST00000484203 SYCP2Q9BX26 1530 aa9.6□□□□□ -0.87
PTCD3-215ENST00000484203 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 ZNF644Q9H582 1327 aaPredicted RBP9.59□□□□□ -0.87
PTCD3-215ENST00000484203 SAMD9LQ8IVG5 1584 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 DIP2CQ9Y2E4 1556 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 MIA2Q96PC5 1412 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 MICALL2Q8IY33 904 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 CDC42BPBQ9Y5S2 1711 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 A2MP01023 1474 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 LMTK3Q96Q04 1460 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 MBD5Q9P267 1494 aa9.59□□□□□ -0.87
PTCD3-215ENST00000484203 UHRF1BP1Q6BDS2 1440 aa9.58□□□□□ -0.88
PTCD3-215ENST00000484203 CEBPAP49715 358 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-215ENST00000484203 C3orf67Q6ZVT6 689 aa9.58□□□□□ -0.88
PTCD3-215ENST00000484203 LRRIQ1Q96JM4 1722 aa9.58□□□□□ -0.88
PTCD3-215ENST00000484203 DHX29Q7Z478 1369 aaKnown RBP9.58□□□□□ -0.88
PTCD3-215ENST00000484203 CCDC141Q6ZP82 1450 aa9.58□□□□□ -0.88
PTCD3-215ENST00000484203 ATP7AQ04656 1500 aa9.57□□□□□ -0.88
PTCD3-215ENST00000484203 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
PTCD3-215ENST00000484203 GGT6Q6P531 493 aa9.57□□□□□ -0.88
PTCD3-215ENST00000484203 TIAM1Q13009 1591 aa9.57□□□□□ -0.88
PTCD3-215ENST00000484203 NPATQ14207 1427 aa9.56□□□□□ -0.88
PTCD3-215ENST00000484203 ZMYM3Q14202 1370 aa9.56□□□□□ -0.88
PTCD3-215ENST00000484203 SNPHO15079 494 aa9.56□□□□□ -0.88
PTCD3-215ENST00000484203 HSPA2P54652 639 aa9.56□□□□□ -0.88
PTCD3-215ENST00000484203 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
PTCD3-215ENST00000484203 ITSN2Q9NZM3 1697 aa9.55□□□□□ -0.88
PTCD3-215ENST00000484203 KANK4Q5T7N3 995 aaPredicted RBP9.55□□□□□ -0.88
PTCD3-215ENST00000484203 TMEM121BQ9BXQ6 578 aaPredicted RBP9.55□□□□□ -0.88
PTCD3-215ENST00000484203 CDC42BPAQ5VT25 1732 aa9.55□□□□□ -0.88
PTCD3-215ENST00000484203 MYOM3Q5VTT5 1437 aa9.55□□□□□ -0.88
PTCD3-215ENST00000484203 RIMS1Q86UR5 1692 aaKnown RBP9.55□□□□□ -0.88
PTCD3-215ENST00000484203 CAMSAP2Q08AD1 1489 aa9.54□□□□□ -0.88
PTCD3-215ENST00000484203 SUPT6HQ7KZ85 1726 aaKnown RBP9.54□□□□□ -0.88
PTCD3-215ENST00000484203 ABCA6Q8N139 1617 aa9.54□□□□□ -0.88
PTCD3-215ENST00000484203 KIF3BO15066 747 aa9.54□□□□□ -0.88
PTCD3-215ENST00000484203 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
PTCD3-215ENST00000484203 FBXO41Q8TF61 875 aa9.53□□□□□ -0.88
PTCD3-215ENST00000484203 WASHC2CQ9Y4E1 1318 aa9.53□□□□□ -0.88
PTCD3-215ENST00000484203 KIDINS220Q9ULH0 1771 aa9.52□□□□□ -0.88
PTCD3-215ENST00000484203 FAM135AQ9P2D6 1515 aa9.52□□□□□ -0.88
PTCD3-215ENST00000484203 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
PTCD3-215ENST00000484203 INO80Q9ULG1 1556 aaPredicted RBP9.52□□□□□ -0.89
PTCD3-215ENST00000484203 PLXNC1O60486 1568 aa9.51□□□□□ -0.89
PTCD3-215ENST00000484203 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
PTCD3-215ENST00000484203 FER1L4A9Z1Z3 1794 aa9.5□□□□□ -0.89
PTCD3-215ENST00000484203 ST18O60284 1047 aa9.49□□□□□ -0.89
PTCD3-215ENST00000484203 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
PTCD3-215ENST00000484203 PTPRTO14522 1441 aa9.48□□□□□ -0.89
PTCD3-215ENST00000484203 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
PTCD3-215ENST00000484203 SETD1BQ9UPS6 1966 aaKnown RBP9.48□□□□□ -0.89
PTCD3-215ENST00000484203 SIGLEC1Q9BZZ2 1709 aa9.48□□□□□ -0.89
PTCD3-215ENST00000484203 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
PTCD3-215ENST00000484203 ANKRD30AQ9BXX3 1397 aa9.47□□□□□ -0.89
PTCD3-215ENST00000484203 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
PTCD3-215ENST00000484203 SHANK2Q9UPX8 1470 aa9.47□□□□□ -0.89
PTCD3-215ENST00000484203 THEMISQ8N1K5 641 aaPredicted RBP9.46□□□□□ -0.9
PTCD3-215ENST00000484203 TMC2Q8TDI7 906 aa9.46□□□□□ -0.9
PTCD3-215ENST00000484203 TNRQ92752 1358 aa9.46□□□□□ -0.9
PTCD3-215ENST00000484203 KIF15Q9NS87 1388 aa9.46□□□□□ -0.9
PTCD3-215ENST00000484203 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 PDE4AP27815 886 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 TMEM92Q6UXU6 159 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 KANK1Q14678 1352 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 PLA2R1Q13018 1463 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 KDM5DQ9BY66 1539 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 PREX1Q8TCU6 1659 aa9.45□□□□□ -0.9
PTCD3-215ENST00000484203 RRP7BPQ9NSQ0 103 aa9.44□□□□□ -0.9
PTCD3-215ENST00000484203 ABCC5O15440 1437 aa9.44□□□□□ -0.9
PTCD3-215ENST00000484203 ERBINQ96RT1 1412 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms