RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SETD1BQ9UPS6 1966 aaKnown RBP9.43□□□□□ -0.9
CSDE1-207ENST00000483407 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
CSDE1-207ENST00000483407 SAMD9LQ8IVG5 1584 aa9.42□□□□□ -0.9
CSDE1-207ENST00000483407 SYCP2Q9BX26 1530 aa9.42□□□□□ -0.9
CSDE1-207ENST00000483407 NPATQ14207 1427 aa9.42□□□□□ -0.9
CSDE1-207ENST00000483407 ZMYM3Q14202 1370 aa9.42□□□□□ -0.9
CSDE1-207ENST00000483407 PELP1Q8IZL8 1130 aaKnown RBP9.42□□□□□ -0.9
CSDE1-207ENST00000483407 SLC39A7Q92504 469 aa9.42□□□□□ -0.9
CSDE1-207ENST00000483407 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-207ENST00000483407 PSEN1P49768 467 aa9.41□□□□□ -0.9
CSDE1-207ENST00000483407 KIDINS220Q9ULH0 1771 aa9.41□□□□□ -0.9
CSDE1-207ENST00000483407 C3P01024 1663 aa9.41□□□□□ -0.9
CSDE1-207ENST00000483407 NCOA1Q15788 1441 aa9.4□□□□□ -0.9
CSDE1-207ENST00000483407 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
CSDE1-207ENST00000483407 GGT6Q6P531 493 aa9.4□□□□□ -0.9
CSDE1-207ENST00000483407 METRNQ9UJH8 293 aa9.4□□□□□ -0.9
CSDE1-207ENST00000483407 A2MP01023 1474 aa9.4□□□□□ -0.91
CSDE1-207ENST00000483407 STRCQ7RTU9 1775 aa9.4□□□□□ -0.91
CSDE1-207ENST00000483407 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
CSDE1-207ENST00000483407 ATP7AQ04656 1500 aa9.39□□□□□ -0.91
CSDE1-207ENST00000483407 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-207ENST00000483407 SCUBE2Q9NQ36 999 aa9.38□□□□□ -0.91
CSDE1-207ENST00000483407 POTEJP0CG39 1038 aa9.37□□□□□ -0.91
CSDE1-207ENST00000483407 IFNL1Q8IU54 200 aa9.37□□□□□ -0.91
CSDE1-207ENST00000483407 KIF12Q96FN5 646 aa9.37□□□□□ -0.91
CSDE1-207ENST00000483407 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
CSDE1-207ENST00000483407 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
CSDE1-207ENST00000483407 IQSEC2Q5JU85 1478 aa9.36□□□□□ -0.91
CSDE1-207ENST00000483407 CAMSAP1Q5T5Y3 1602 aa9.36□□□□□ -0.91
CSDE1-207ENST00000483407 MAP3K13O43283 966 aa9.36□□□□□ -0.91
CSDE1-207ENST00000483407 MROH2AA6NES4 1674 aa9.36□□□□□ -0.91
CSDE1-207ENST00000483407 ZNF644Q9H582 1327 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-207ENST00000483407 RTEL1-TNFRSF6BF6WH68 1400 aa9.35□□□□□ -0.91
CSDE1-207ENST00000483407 PLXNC1O60486 1568 aa9.35□□□□□ -0.91
CSDE1-207ENST00000483407 PTPRKQ15262 1439 aa9.35□□□□□ -0.91
CSDE1-207ENST00000483407 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
CSDE1-207ENST00000483407 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
CSDE1-207ENST00000483407 INO80Q9ULG1 1556 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-207ENST00000483407 EHBP1L1Q8N3D4 1523 aa9.35□□□□□ -0.91
CSDE1-207ENST00000483407 LTBP4Q8N2S1 1624 aa9.34□□□□□ -0.91
CSDE1-207ENST00000483407 PLA2R1Q13018 1463 aa9.34□□□□□ -0.91
CSDE1-207ENST00000483407 SUPT6HQ7KZ85 1726 aaKnown RBP9.34□□□□□ -0.91
CSDE1-207ENST00000483407 DHX29Q7Z478 1369 aaKnown RBP9.34□□□□□ -0.91
CSDE1-207ENST00000483407 MBD5Q9P267 1494 aa9.34□□□□□ -0.91
CSDE1-207ENST00000483407 ZNF335Q9H4Z2 1342 aaPredicted RBP9.33□□□□□ -0.92
CSDE1-207ENST00000483407 SPATA31D1Q6ZQQ2 1576 aa9.33□□□□□ -0.92
CSDE1-207ENST00000483407 KIF3BO15066 747 aa9.33□□□□□ -0.92
CSDE1-207ENST00000483407 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
CSDE1-207ENST00000483407 PHF12Q96QT6 1004 aa9.33□□□□□ -0.92
CSDE1-207ENST00000483407 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
CSDE1-207ENST00000483407 UBAP1LF5GYI3 381 aa9.32□□□□□ -0.92
CSDE1-207ENST00000483407 ATMINO43313 823 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-207ENST00000483407 CEP170BQ9Y4F5 1589 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-207ENST00000483407 CLTCQ00610 1675 aaKnown RBP9.32□□□□□ -0.92
CSDE1-207ENST00000483407 TSPY4P0CV99 314 aa9.31□□□□□ -0.92
CSDE1-207ENST00000483407 TSPY10P0CW01 314 aa9.31□□□□□ -0.92
CSDE1-207ENST00000483407 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
CSDE1-207ENST00000483407 CCDC141Q6ZP82 1450 aa9.31□□□□□ -0.92
CSDE1-207ENST00000483407 MYO3AQ8NEV4 1616 aa9.31□□□□□ -0.92
CSDE1-207ENST00000483407 WASHC2CQ9Y4E1 1318 aa9.31□□□□□ -0.92
CSDE1-207ENST00000483407 ADGBQ8N7X0 1667 aa9.3□□□□□ -0.92
CSDE1-207ENST00000483407 A2ML1A8K2U0 1454 aa9.3□□□□□ -0.92
CSDE1-207ENST00000483407 TNRQ92752 1358 aa9.3□□□□□ -0.92
CSDE1-207ENST00000483407 SOX12O15370 315 aa9.3□□□□□ -0.92
CSDE1-207ENST00000483407 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
CSDE1-207ENST00000483407 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
CSDE1-207ENST00000483407 CDAN1Q8IWY9 1227 aa9.29□□□□□ -0.92
CSDE1-207ENST00000483407 FBXO22Q8NEZ5 403 aa9.29□□□□□ -0.92
CSDE1-207ENST00000483407 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
CSDE1-207ENST00000483407 ZNF142P52746 1687 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-207ENST00000483407 CAMSAP2Q08AD1 1489 aa9.28□□□□□ -0.92
CSDE1-207ENST00000483407 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
CSDE1-207ENST00000483407 FAM135AQ9P2D6 1515 aa9.28□□□□□ -0.92
CSDE1-207ENST00000483407 NLRP6P59044 892 aa9.28□□□□□ -0.92
CSDE1-207ENST00000483407 FBXO31Q5XUX0 539 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-207ENST00000483407 CABP2Q9NPB3 220 aa9.28□□□□□ -0.92
CSDE1-207ENST00000483407 PZPP20742 1482 aa9.28□□□□□ -0.92
CSDE1-207ENST00000483407 ANKLE2Q86XL3 938 aa9.27□□□□□ -0.93
CSDE1-207ENST00000483407 THEMISQ8N1K5 641 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-207ENST00000483407 MIA2Q96PC5 1412 aa9.26□□□□□ -0.93
CSDE1-207ENST00000483407 TOM1O60784 492 aa9.26□□□□□ -0.93
CSDE1-207ENST00000483407 PPP1R37O75864 691 aa9.26□□□□□ -0.93
CSDE1-207ENST00000483407 DNMT1P26358 1616 aaKnown RBP9.25□□□□□ -0.93
CSDE1-207ENST00000483407 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
CSDE1-207ENST00000483407 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
CSDE1-207ENST00000483407 NLRP1Q9C000 1473 aa9.25□□□□□ -0.93
CSDE1-207ENST00000483407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.24□□□□□ -0.93
CSDE1-207ENST00000483407 CPS1P31327 1500 aa9.24□□□□□ -0.93
CSDE1-207ENST00000483407 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
CSDE1-207ENST00000483407 VPS8Q8N3P4 1428 aa9.23□□□□□ -0.93
CSDE1-207ENST00000483407 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
CSDE1-207ENST00000483407 SHANK2Q9UPX8 1470 aa9.23□□□□□ -0.93
CSDE1-207ENST00000483407 PIP4K2BP78356 416 aa9.23□□□□□ -0.93
CSDE1-207ENST00000483407 UGGT1Q9NYU2 1555 aa9.22□□□□□ -0.93
CSDE1-207ENST00000483407 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-207ENST00000483407 HSPA1LP34931 641 aa9.21□□□□□ -0.94
CSDE1-207ENST00000483407 MS4A3Q96HJ5 214 aa9.21□□□□□ -0.94
CSDE1-207ENST00000483407 NEURL4Q96JN8 1562 aa9.2□□□□□ -0.94
CSDE1-207ENST00000483407 MYOM3Q5VTT5 1437 aa9.2□□□□□ -0.94
CSDE1-207ENST00000483407 MED14O60244 1454 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms