RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 MIA2Q96PC5 1412 aa6.6□□□□□ -1.35
VPS13D-208ENST00000481484 TTLL13PA6NNM8 815 aa6.6□□□□□ -1.35
VPS13D-208ENST00000481484 C7P10643 843 aa6.6□□□□□ -1.35
VPS13D-208ENST00000481484 MLECQ14165 292 aa6.6□□□□□ -1.35
VPS13D-208ENST00000481484 ILDR1Q86SU0 546 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-208ENST00000481484 FBXO41Q8TF61 875 aa6.6□□□□□ -1.35
VPS13D-208ENST00000481484 CIZ1Q9ULV3 898 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-208ENST00000481484 CAMSAP1Q5T5Y3 1602 aa6.6□□□□□ -1.35
VPS13D-208ENST00000481484 PRDM15P57071 1507 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-208ENST00000481484 MYOM3Q5VTT5 1437 aa6.59□□□□□ -1.35
VPS13D-208ENST00000481484 DEPDC5O75140 1603 aa6.59□□□□□ -1.35
VPS13D-208ENST00000481484 DNMT1P26358 1616 aaKnown RBP6.59□□□□□ -1.35
VPS13D-208ENST00000481484 RSPH4AQ5TD94 716 aa6.59□□□□□ -1.35
VPS13D-208ENST00000481484 SLC39A7Q92504 469 aa6.59□□□□□ -1.35
VPS13D-208ENST00000481484 A2ML1A8K2U0 1454 aa6.59□□□□□ -1.36
VPS13D-208ENST00000481484 PTPN23Q9H3S7 1636 aa6.58□□□□□ -1.36
VPS13D-208ENST00000481484 ZNF777Q9ULD5 760 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-208ENST00000481484 PCDHB8Q9UN66 801 aa6.58□□□□□ -1.36
VPS13D-208ENST00000481484 DUOX2Q9NRD8 1548 aa6.58□□□□□ -1.36
VPS13D-208ENST00000481484 TCOF1Q13428 1488 aaKnown RBP6.58□□□□□ -1.36
VPS13D-208ENST00000481484 NLRP1Q9C000 1473 aa6.58□□□□□ -1.36
VPS13D-208ENST00000481484 KDM5AP29375 1690 aaKnown RBP6.58□□□□□ -1.36
VPS13D-208ENST00000481484 PTPRKQ15262 1439 aa6.58□□□□□ -1.36
VPS13D-208ENST00000481484 DHX29Q7Z478 1369 aaKnown RBP6.57□□□□□ -1.36
VPS13D-208ENST00000481484 SYNMO15061 1565 aa6.57□□□□□ -1.36
VPS13D-208ENST00000481484 CEP152O94986 1710 aa6.57□□□□□ -1.36
VPS13D-208ENST00000481484 ZNF467Q7Z7K2 595 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-208ENST00000481484 ERBINQ96RT1 1412 aa6.57□□□□□ -1.36
VPS13D-208ENST00000481484 MROH1Q8NDA8 1641 aa6.57□□□□□ -1.36
VPS13D-208ENST00000481484 SPATA31D1Q6ZQQ2 1576 aa6.57□□□□□ -1.36
VPS13D-208ENST00000481484 ABCC3O15438 1527 aa6.56□□□□□ -1.36
VPS13D-208ENST00000481484 POTEB2H3BUK9 544 aa6.56□□□□□ -1.36
VPS13D-208ENST00000481484 METRNQ9UJH8 293 aa6.56□□□□□ -1.36
VPS13D-208ENST00000481484 ZMYM3Q14202 1370 aa6.56□□□□□ -1.36
VPS13D-208ENST00000481484 LTBP4Q8N2S1 1624 aa6.55□□□□□ -1.36
VPS13D-208ENST00000481484 HSPA2P54652 639 aa6.55□□□□□ -1.36
VPS13D-208ENST00000481484 TMEM106CQ9BVX2 250 aa6.55□□□□□ -1.36
VPS13D-208ENST00000481484 TRIM35Q9UPQ4 493 aa6.55□□□□□ -1.36
VPS13D-208ENST00000481484 IQGAP1P46940 1657 aa6.55□□□□□ -1.36
VPS13D-208ENST00000481484 NEURL4Q96JN8 1562 aa6.54□□□□□ -1.36
VPS13D-208ENST00000481484 HNRNPMP52272 730 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS13D-208ENST00000481484 CPS1P31327 1500 aa6.54□□□□□ -1.36
VPS13D-208ENST00000481484 TNRQ92752 1358 aa6.54□□□□□ -1.36
VPS13D-208ENST00000481484 UBR1Q8IWV7 1749 aa6.53□□□□□ -1.36
VPS13D-208ENST00000481484 UGGT1Q9NYU2 1555 aa6.53□□□□□ -1.36
VPS13D-208ENST00000481484 FGD6Q6ZV73 1430 aa6.53□□□□□ -1.36
VPS13D-208ENST00000481484 POTEFA5A3E0 1075 aa6.53□□□□□ -1.36
VPS13D-208ENST00000481484 PKD2Q13563 968 aa6.53□□□□□ -1.36
VPS13D-208ENST00000481484 IER5LQ5T953 404 aa6.53□□□□□ -1.36
VPS13D-208ENST00000481484 ERVK-7P63135 1459 aa6.53□□□□□ -1.36
VPS13D-208ENST00000481484 LMTK2Q8IWU2 1503 aa6.52□□□□□ -1.37
VPS13D-208ENST00000481484 TSPY4P0CV99 314 aa6.52□□□□□ -1.37
VPS13D-208ENST00000481484 TSPY10P0CW01 314 aa6.52□□□□□ -1.37
VPS13D-208ENST00000481484 CEBPAP49715 358 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-208ENST00000481484 CERKQ8TCT0 537 aa6.52□□□□□ -1.37
VPS13D-208ENST00000481484 ADGRL2O95490 1459 aa6.52□□□□□ -1.37
VPS13D-208ENST00000481484 VWDEQ8N2E2 1590 aa6.52□□□□□ -1.37
VPS13D-208ENST00000481484 GCC2Q8IWJ2 1684 aa6.52□□□□□ -1.37
VPS13D-208ENST00000481484 ZNF644Q9H582 1327 aaPredicted RBP6.51□□□□□ -1.37
VPS13D-208ENST00000481484 DAPK1P53355 1430 aa6.51□□□□□ -1.37
VPS13D-208ENST00000481484 ARHGAP31Q2M1Z3 1444 aa6.51□□□□□ -1.37
VPS13D-208ENST00000481484 EFCAB6Q5THR3 1501 aa6.51□□□□□ -1.37
VPS13D-208ENST00000481484 POTEJP0CG39 1038 aa6.51□□□□□ -1.37
VPS13D-208ENST00000481484 KIF15Q9NS87 1388 aa6.51□□□□□ -1.37
VPS13D-208ENST00000481484 MED14O60244 1454 aa6.51□□□□□ -1.37
VPS13D-208ENST00000481484 TET3O43151 1660 aa6.5□□□□□ -1.37
VPS13D-208ENST00000481484 UNC13BO14795 1591 aa6.5□□□□□ -1.37
VPS13D-208ENST00000481484 PSEN1P49768 467 aa6.5□□□□□ -1.37
VPS13D-208ENST00000481484 PDAP1Q13442 181 aaKnown RBP6.5□□□□□ -1.37
VPS13D-208ENST00000481484 GGT6Q6P531 493 aa6.5□□□□□ -1.37
VPS13D-208ENST00000481484 COLQQ9Y215 455 aaPredicted RBP6.5□□□□□ -1.37
VPS13D-208ENST00000481484 RPRD2Q5VT52 1461 aaKnown RBP6.49□□□□□ -1.37
VPS13D-208ENST00000481484 CFAP65Q6ZU64 1925 aaKnown RBP6.49□□□□□ -1.37
VPS13D-208ENST00000481484 KIF3BO15066 747 aa6.49□□□□□ -1.37
VPS13D-208ENST00000481484 OTUD5Q96G74 571 aa6.49□□□□□ -1.37
VPS13D-208ENST00000481484 ADGRB3O60242 1522 aa6.49□□□□□ -1.37
VPS13D-208ENST00000481484 SLIT1O75093 1534 aa6.49□□□□□ -1.37
VPS13D-208ENST00000481484 WASHC2CQ9Y4E1 1318 aa6.49□□□□□ -1.37
VPS13D-208ENST00000481484 KANK1Q14678 1352 aa6.48□□□□□ -1.37
VPS13D-208ENST00000481484 ANKRD30AQ9BXX3 1397 aa6.48□□□□□ -1.37
VPS13D-208ENST00000481484 PIK3C2BO00750 1634 aa6.48□□□□□ -1.37
VPS13D-208ENST00000481484 SEC24BO95487 1268 aa6.48□□□□□ -1.37
VPS13D-208ENST00000481484 IRX5P78411 483 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-208ENST00000481484 ABCC5O15440 1437 aa6.48□□□□□ -1.37
VPS13D-208ENST00000481484 SCAF11Q99590 1463 aaKnown RBP6.47□□□□□ -1.37
VPS13D-208ENST00000481484 ARHGAP23Q9P227 1491 aa6.47□□□□□ -1.37
VPS13D-208ENST00000481484 RNF25Q96BH1 459 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-208ENST00000481484 NPHP4O75161 1426 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-208ENST00000481484 IQGAP3Q86VI3 1631 aa6.47□□□□□ -1.37
VPS13D-208ENST00000481484 NWD1Q149M9 1564 aa6.45□□□□□ -1.38
VPS13D-208ENST00000481484 RIOK3O14730 519 aaKnown RBP6.45□□□□□ -1.38
VPS13D-208ENST00000481484 THEMISQ8N1K5 641 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-208ENST00000481484 OCEL1Q9H607 264 aa6.45□□□□□ -1.38
VPS13D-208ENST00000481484 DIP2AQ14689 1571 aa6.44□□□□□ -1.38
VPS13D-208ENST00000481484 KANK4Q5T7N3 995 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-208ENST00000481484 MAMSTRQ6ZN01 415 aa6.44□□□□□ -1.38
VPS13D-208ENST00000481484 NKTRP30414 1462 aaKnown RBP6.44□□□□□ -1.38
VPS13D-208ENST00000481484 STRCP1A6NGW2 1772 aa6.44□□□□□ -1.38
VPS13D-208ENST00000481484 ROCK1Q13464 1354 aa6.44□□□□□ -1.38
VPS13D-208ENST00000481484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms