RNA–Protein interactions for RNA: ENST00000481321.1

CRIM1-207, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 346 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-207ENST00000481321 FOXD1Q16676 465 aa10.84□□□□□ -0.67
CRIM1-207ENST00000481321 RPRD2Q5VT52 1461 aaKnown RBP10.84□□□□□ -0.67
CRIM1-207ENST00000481321 LMTK2Q8IWU2 1503 aa10.84□□□□□ -0.67
CRIM1-207ENST00000481321 CCDC144AA2RUR9 1427 aa10.84□□□□□ -0.67
CRIM1-207ENST00000481321 FAM135BQ49AJ0 1406 aa10.84□□□□□ -0.67
CRIM1-207ENST00000481321 PPP1R15AO75807 674 aaPredicted RBP10.83□□□□□ -0.68
CRIM1-207ENST00000481321 STAC3Q96MF2 364 aa10.83□□□□□ -0.68
CRIM1-207ENST00000481321 UBR1Q8IWV7 1749 aa10.83□□□□□ -0.68
CRIM1-207ENST00000481321 TET3O43151 1660 aa10.82□□□□□ -0.68
CRIM1-207ENST00000481321 SRCAPQ6ZRS2 3230 aa10.81□□□□□ -0.68
CRIM1-207ENST00000481321 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
CRIM1-207ENST00000481321 ARHGAP31Q2M1Z3 1444 aa10.79□□□□□ -0.68
CRIM1-207ENST00000481321 FBXO31Q5XUX0 539 aaPredicted RBP10.78□□□□□ -0.68
CRIM1-207ENST00000481321 L3MBTL2Q969R5 705 aa10.78□□□□□ -0.68
CRIM1-207ENST00000481321 MROH1Q8NDA8 1641 aa10.77□□□□□ -0.68
CRIM1-207ENST00000481321 SCAF11Q99590 1463 aaKnown RBP10.77□□□□□ -0.69
CRIM1-207ENST00000481321 SLC52A1Q9NWF4 448 aa10.77□□□□□ -0.69
CRIM1-207ENST00000481321 CFAP65Q6ZU64 1925 aaKnown RBP10.77□□□□□ -0.69
CRIM1-207ENST00000481321 ABCC3O15438 1527 aa10.77□□□□□ -0.69
CRIM1-207ENST00000481321 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.69
CRIM1-207ENST00000481321 JCADQ9P266 1359 aa10.76□□□□□ -0.69
CRIM1-207ENST00000481321 E9PCH4 1651 aa10.76□□□□□ -0.69
CRIM1-207ENST00000481321 SHPRHQ149N8 1683 aa10.76□□□□□ -0.69
CRIM1-207ENST00000481321 TRPM2O94759 1503 aa10.75□□□□□ -0.69
CRIM1-207ENST00000481321 ZNF316A6NFI3 1004 aaPredicted RBP10.75□□□□□ -0.69
CRIM1-207ENST00000481321 CDK12Q9NYV4 1490 aaPredicted RBP10.74□□□□□ -0.69
CRIM1-207ENST00000481321 SLIT1O75093 1534 aa10.74□□□□□ -0.69
CRIM1-207ENST00000481321 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
CRIM1-207ENST00000481321 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
CRIM1-207ENST00000481321 SPHKAPQ2M3C7 1700 aa10.74□□□□□ -0.69
CRIM1-207ENST00000481321 CEP152O94986 1710 aa10.73□□□□□ -0.69
CRIM1-207ENST00000481321 DCAF11Q8TEB1 546 aa10.73□□□□□ -0.69
CRIM1-207ENST00000481321 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
CRIM1-207ENST00000481321 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
CRIM1-207ENST00000481321 ERVK-7P63135 1459 aa10.72□□□□□ -0.69
CRIM1-207ENST00000481321 ARHGAP23Q9P227 1491 aa10.72□□□□□ -0.69
CRIM1-207ENST00000481321 KDM5AP29375 1690 aaKnown RBP10.72□□□□□ -0.69
CRIM1-207ENST00000481321 NWD1Q149M9 1564 aa10.7□□□□□ -0.7
CRIM1-207ENST00000481321 NOS1P29475 1434 aa10.7□□□□□ -0.7
CRIM1-207ENST00000481321 TMEM94Q12767 1356 aa10.7□□□□□ -0.7
CRIM1-207ENST00000481321 SPATA31A6Q5VVP1 1343 aa10.7□□□□□ -0.7
CRIM1-207ENST00000481321 HDGFP51858 240 aaKnown RBP10.7□□□□□ -0.7
CRIM1-207ENST00000481321 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
CRIM1-207ENST00000481321 LRP6O75581 1613 aa10.69□□□□□ -0.7
CRIM1-207ENST00000481321 NKTRP30414 1462 aaKnown RBP10.69□□□□□ -0.7
CRIM1-207ENST00000481321 CHGAP10645 457 aaKnown RBP10.69□□□□□ -0.7
CRIM1-207ENST00000481321 ZNF326Q5BKZ1 582 aaKnown RBP10.69□□□□□ -0.7
CRIM1-207ENST00000481321 MEX3CQ5U5Q3 659 aaKnown RBP10.69□□□□□ -0.7
CRIM1-207ENST00000481321 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
CRIM1-207ENST00000481321 KIF1BO60333 1816 aa10.69□□□□□ -0.7
CRIM1-207ENST00000481321 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
CRIM1-207ENST00000481321 SPATA31E1Q6ZUB1 1445 aa10.67□□□□□ -0.7
CRIM1-207ENST00000481321 MSH6P52701 1360 aa10.67□□□□□ -0.7
CRIM1-207ENST00000481321 PIK3C2BO00750 1634 aa10.67□□□□□ -0.7
CRIM1-207ENST00000481321 VGFO15240 615 aaPredicted RBP10.67□□□□□ -0.7
CRIM1-207ENST00000481321 RXRBP28702 533 aa10.67□□□□□ -0.7
CRIM1-207ENST00000481321 AHDC1Q5TGY3 1603 aaPredicted RBP10.66□□□□□ -0.7
CRIM1-207ENST00000481321 EID1Q9Y6B2 187 aa10.66□□□□□ -0.7
CRIM1-207ENST00000481321 CLTCL1P53675 1640 aa10.66□□□□□ -0.7
CRIM1-207ENST00000481321 CHD2O14647 1828 aaKnown RBP10.65□□□□□ -0.7
CRIM1-207ENST00000481321 SLC24A1O60721 1099 aa10.65□□□□□ -0.7
CRIM1-207ENST00000481321 IDI1Q13907 227 aa10.65□□□□□ -0.7
CRIM1-207ENST00000481321 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
CRIM1-207ENST00000481321 NBPF8Q3BBV2 869 aa10.64□□□□□ -0.71
CRIM1-207ENST00000481321 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.64□□□□□ -0.71
CRIM1-207ENST00000481321 KCNA6P17658 529 aa10.63□□□□□ -0.71
CRIM1-207ENST00000481321 LTKP29376 864 aa10.63□□□□□ -0.71
CRIM1-207ENST00000481321 PROSER2Q86WR7 435 aaPredicted RBP10.63□□□□□ -0.71
CRIM1-207ENST00000481321 CARD11Q9BXL7 1154 aa10.63□□□□□ -0.71
CRIM1-207ENST00000481321 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
CRIM1-207ENST00000481321 SLAIN2Q9P270 581 aa10.62□□□□□ -0.71
CRIM1-207ENST00000481321 ROCK2O75116 1388 aaKnown RBP10.62□□□□□ -0.71
CRIM1-207ENST00000481321 MYOM2P54296 1465 aa10.61□□□□□ -0.71
CRIM1-207ENST00000481321 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
CRIM1-207ENST00000481321 RGS12O14924 1447 aa10.61□□□□□ -0.71
CRIM1-207ENST00000481321 ADGRB3O60242 1522 aa10.61□□□□□ -0.71
CRIM1-207ENST00000481321 TMEM2Q9UHN6 1383 aa10.61□□□□□ -0.71
CRIM1-207ENST00000481321 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
CRIM1-207ENST00000481321 ZFYVE9O95405 1425 aa10.6□□□□□ -0.71
CRIM1-207ENST00000481321 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
CRIM1-207ENST00000481321 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.6□□□□□ -0.71
CRIM1-207ENST00000481321 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
CRIM1-207ENST00000481321 ATAD2Q6PL18 1390 aa10.59□□□□□ -0.71
CRIM1-207ENST00000481321 SETBP1Q9Y6X0 1596 aa10.59□□□□□ -0.71
CRIM1-207ENST00000481321 DIEXFQ68CQ4 756 aaKnown RBP10.58□□□□□ -0.72
CRIM1-207ENST00000481321 EP400Q96L91 3159 aa10.58□□□□□ -0.72
CRIM1-207ENST00000481321 LRP5O75197 1615 aa10.58□□□□□ -0.72
CRIM1-207ENST00000481321 NCOA3Q9Y6Q9 1424 aa10.58□□□□□ -0.72
CRIM1-207ENST00000481321 EIF3AQ14152 1382 aaKnown RBP10.57□□□□□ -0.72
CRIM1-207ENST00000481321 GPRASP1Q5JY77 1395 aa10.57□□□□□ -0.72
CRIM1-207ENST00000481321 USP47Q96K76 1375 aa10.57□□□□□ -0.72
CRIM1-207ENST00000481321 KIAA1210Q9ULL0 1709 aa10.57□□□□□ -0.72
CRIM1-207ENST00000481321 NHSL1Q5SYE7 1610 aa10.57□□□□□ -0.72
CRIM1-207ENST00000481321 AFF2P51816 1311 aa10.57□□□□□ -0.72
CRIM1-207ENST00000481321 TMEM131LA2VDJ0 1609 aa10.56□□□□□ -0.72
CRIM1-207ENST00000481321 LAMC1P11047 1609 aa10.56□□□□□ -0.72
CRIM1-207ENST00000481321 NUTM2BA6NNL0 878 aaPredicted RBP10.56□□□□□ -0.72
CRIM1-207ENST00000481321 NUTM2EB1AL46 878 aaPredicted RBP10.56□□□□□ -0.72
CRIM1-207ENST00000481321 RBM6P78332 1123 aaKnown RBP10.56□□□□□ -0.72
CRIM1-207ENST00000481321 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms