RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
LSM5-210ENST00000480956 TCF3P15923 654 aa11.78□□□□□ -0.52
LSM5-210ENST00000480956 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
LSM5-210ENST00000480956 G3V3G9 751 aa11.77□□□□□ -0.52
LSM5-210ENST00000480956 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.52
LSM5-210ENST00000480956 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.52
LSM5-210ENST00000480956 PRM3Q9NNZ6 103 aa11.77□□□□□ -0.52
LSM5-210ENST00000480956 GNEQ9Y223 722 aaKnown RBP11.77□□□□□ -0.52
LSM5-210ENST00000480956 TMEM259Q4ZIN3 620 aa11.77□□□□□ -0.53
LSM5-210ENST00000480956 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.53
LSM5-210ENST00000480956 GPHNQ9NQX3 736 aaPredicted RBP11.77□□□□□ -0.53
LSM5-210ENST00000480956 ERCC3P19447 782 aa11.76□□□□□ -0.53
LSM5-210ENST00000480956 TSR1Q2NL82 804 aaKnown RBP11.76□□□□□ -0.53
LSM5-210ENST00000480956 CFAP70Q5T0N1 1121 aa11.76□□□□□ -0.53
LSM5-210ENST00000480956 C8orf37Q96NL8 207 aa11.76□□□□□ -0.53
LSM5-210ENST00000480956 TMUB1Q9BVT8 246 aa11.76□□□□□ -0.53
LSM5-210ENST00000480956 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
LSM5-210ENST00000480956 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
LSM5-210ENST00000480956 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
LSM5-210ENST00000480956 SLAIN1Q8ND83 568 aa11.75□□□□□ -0.53
LSM5-210ENST00000480956 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
LSM5-210ENST00000480956 DSG2Q14126 1118 aa11.74□□□□□ -0.53
LSM5-210ENST00000480956 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
LSM5-210ENST00000480956 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
LSM5-210ENST00000480956 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
LSM5-210ENST00000480956 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
LSM5-210ENST00000480956 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
LSM5-210ENST00000480956 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.54
LSM5-210ENST00000480956 OSBPP22059 807 aa11.71□□□□□ -0.54
LSM5-210ENST00000480956 FOXK1P85037 733 aa11.71□□□□□ -0.54
LSM5-210ENST00000480956 MDM2Q00987 491 aaPredicted RBP11.71□□□□□ -0.54
LSM5-210ENST00000480956 TMEM88BA6NKF7 163 aa11.7□□□□□ -0.54
LSM5-210ENST00000480956 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
LSM5-210ENST00000480956 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
LSM5-210ENST00000480956 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
LSM5-210ENST00000480956 UBXN4Q92575 508 aa11.69□□□□□ -0.54
LSM5-210ENST00000480956 TBC1D2BQ9UPU7 963 aa11.69□□□□□ -0.54
LSM5-210ENST00000480956 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
LSM5-210ENST00000480956 TMC2Q8TDI7 906 aa11.68□□□□□ -0.54
LSM5-210ENST00000480956 DNAJC14Q6Y2X3 702 aaPredicted RBP11.67□□□□□ -0.54
LSM5-210ENST00000480956 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
LSM5-210ENST00000480956 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
LSM5-210ENST00000480956 ANKRD62A6NC57 917 aa11.66□□□□□ -0.54
LSM5-210ENST00000480956 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
LSM5-210ENST00000480956 PTGDRQ13258 359 aa11.66□□□□□ -0.54
LSM5-210ENST00000480956 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
LSM5-210ENST00000480956 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
LSM5-210ENST00000480956 PSMD1Q99460 953 aa11.66□□□□□ -0.54
LSM5-210ENST00000480956 PPP1R1BQ9UD71 204 aaPredicted RBP11.66□□□□□ -0.54
LSM5-210ENST00000480956 SOCS7O14512 581 aa11.65□□□□□ -0.54
LSM5-210ENST00000480956 ADAMTS19Q8TE59 1207 aa11.65□□□□□ -0.54
LSM5-210ENST00000480956 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
LSM5-210ENST00000480956 KDM4AO75164 1064 aa11.63□□□□□ -0.55
LSM5-210ENST00000480956 ATG7O95352 703 aa11.63□□□□□ -0.55
LSM5-210ENST00000480956 SF3A1Q15459 793 aaKnown RBP11.63□□□□□ -0.55
LSM5-210ENST00000480956 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
LSM5-210ENST00000480956 ZNF592Q92610 1267 aa11.63□□□□□ -0.55
LSM5-210ENST00000480956 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
LSM5-210ENST00000480956 LMOD1P29536 600 aaPredicted RBP11.61□□□□□ -0.55
LSM5-210ENST00000480956 GIPC2Q8TF65 315 aa11.61□□□□□ -0.55
LSM5-210ENST00000480956 HIRIP3Q9BW71 556 aaPredicted RBP11.61□□□□□ -0.55
LSM5-210ENST00000480956 LCE2DQ5TA82 110 aaPredicted RBP11.6□□□□□ -0.55
LSM5-210ENST00000480956 FAM217BQ9NTX9 383 aaPredicted RBP11.6□□□□□ -0.55
LSM5-210ENST00000480956 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
LSM5-210ENST00000480956 ZC3H4Q9UPT8 1303 aaKnown RBP11.59□□□□□ -0.55
LSM5-210ENST00000480956 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
LSM5-210ENST00000480956 TAF7LQ5H9L4 462 aa11.57□□□□□ -0.56
LSM5-210ENST00000480956 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
LSM5-210ENST00000480956 WASHC4Q2M389 1173 aa11.56□□□□□ -0.56
LSM5-210ENST00000480956 NAALADL2Q58DX5 795 aa11.56□□□□□ -0.56
LSM5-210ENST00000480956 PHOX2BQ99453 314 aa11.56□□□□□ -0.56
LSM5-210ENST00000480956 TBC1D2Q9BYX2 928 aa11.56□□□□□ -0.56
LSM5-210ENST00000480956 SLC34A2O95436 690 aa11.55□□□□□ -0.56
LSM5-210ENST00000480956 MAP3K9P80192 1104 aa11.55□□□□□ -0.56
LSM5-210ENST00000480956 CDCA8Q53HL2 280 aa11.55□□□□□ -0.56
LSM5-210ENST00000480956 LIMD1Q9UGP4 676 aa11.54□□□□□ -0.56
LSM5-210ENST00000480956 VAMP1P23763 118 aa11.53□□□□□ -0.56
LSM5-210ENST00000480956 DDX12PQ92771 950 aa11.53□□□□□ -0.56
LSM5-210ENST00000480956 KHSRPQ92945 711 aaKnown RBP eCLIP11.53□□□□□ -0.56
LSM5-210ENST00000480956 ZNF326Q5BKZ1 582 aaKnown RBP11.52□□□□□ -0.56
LSM5-210ENST00000480956 GPR153Q6NV75 609 aa11.52□□□□□ -0.56
LSM5-210ENST00000480956 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.56
LSM5-210ENST00000480956 BCCIPQ9P287 314 aaKnown RBP eCLIP11.52□□□□□ -0.56
LSM5-210ENST00000480956 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.56
LSM5-210ENST00000480956 KDM4FA0A1W2PPD8 638 aa11.52□□□□□ -0.57
LSM5-210ENST00000480956 NOM1Q5C9Z4 860 aaKnown RBP11.52□□□□□ -0.57
LSM5-210ENST00000480956 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
LSM5-210ENST00000480956 BRPF3Q9ULD4 1205 aa11.52□□□□□ -0.57
LSM5-210ENST00000480956 PTGER2P43116 358 aa11.51□□□□□ -0.57
LSM5-210ENST00000480956 GIMAP6Q6P9H5 292 aa11.51□□□□□ -0.57
LSM5-210ENST00000480956 MARCH6O60337 910 aa11.5□□□□□ -0.57
LSM5-210ENST00000480956 NDUFB9Q9Y6M9 179 aa11.5□□□□□ -0.57
LSM5-210ENST00000480956 ST18O60284 1047 aa11.49□□□□□ -0.57
LSM5-210ENST00000480956 CLSTN1O94985 981 aa11.49□□□□□ -0.57
LSM5-210ENST00000480956 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
LSM5-210ENST00000480956 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
LSM5-210ENST00000480956 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
LSM5-210ENST00000480956 MARSP56192 900 aaKnown RBP11.48□□□□□ -0.57
LSM5-210ENST00000480956 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
LSM5-210ENST00000480956 AP1G2O75843 785 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms