RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 NASPP49321 788 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 CCDC73Q6ZRK6 1079 aa7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 SPRYD3Q8NCJ5 442 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 SMG6Q86US8 1419 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 ERC2O15083 957 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 ANKRD45Q5TZF3 282 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 TRAK2O60296 914 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 GNAI3P08754 354 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 GORABQ5T7V8 394 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 NOC3LQ8WTT2 800 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 MCM5P33992 734 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 PIP4K2AP48426 406 aaPredicted RBP7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 CEP89Q96ST8 783 aa7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 DHX29Q7Z478 1369 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-205ENST00000480058 KIF3BO15066 747 aa7.46□□□□□ -1.21
PRPF4B-205ENST00000480058 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.46□□□□□ -1.21
PRPF4B-205ENST00000480058 FHOD3Q2V2M9 1422 aa7.46□□□□□ -1.22
PRPF4B-205ENST00000480058 ESPNB1AK53 854 aa7.46□□□□□ -1.22
PRPF4B-205ENST00000480058 H3BQV1 296 aa7.46□□□□□ -1.22
PRPF4B-205ENST00000480058 IFFO2Q5TF58 517 aa7.46□□□□□ -1.22
PRPF4B-205ENST00000480058 CUX1P39880 1505 aa7.46□□□□□ -1.22
PRPF4B-205ENST00000480058 AKNAQ7Z591 1439 aa7.46□□□□□ -1.22
PRPF4B-205ENST00000480058 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 NEXNQ0ZGT2 675 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 PNISRQ8TF01 805 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 IGF1RP08069 1367 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 TSPYL1Q9H0U9 437 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 SMC3Q9UQE7 1217 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 TDRD9Q8NDG6 1382 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 SYNE3Q6ZMZ3 975 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 MNS1Q8NEH6 495 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 HIP1O00291 1037 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 FAM13BQ9NYF5 915 aa7.45□□□□□ -1.22
PRPF4B-205ENST00000480058 WDR63Q8IWG1 891 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 PSMA5P28066 241 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 GGT6Q6P531 493 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 SASS6Q6UVJ0 657 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 ZNF771Q7L3S4 317 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 DDX58O95786 925 aaKnown RBP7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 JPH4Q96JJ6 628 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 ATAD2BQ9ULI0 1458 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 CAVIN2O95810 425 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 ZSCAN30Q86W11 494 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 CASKIN1Q8WXD9 1431 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 USP8P40818 1118 aa7.44□□□□□ -1.22
PRPF4B-205ENST00000480058 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 FOXD1Q16676 465 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 ERICH3Q5RHP9 1530 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 SENP3-EIF4A1A0A087X0R7 540 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 COG3Q96JB2 828 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 FYCO1Q9BQS8 1478 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 APBB1O00213 710 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 CPLX1O14810 134 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 MCM4P33991 863 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 AKAP17AQ02040 695 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 DCTN1Q14203 1278 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 JMYQ8N9B5 988 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 ANKRD50Q9ULJ7 1429 aa7.43□□□□□ -1.22
PRPF4B-205ENST00000480058 PLPPR3Q6T4P5 718 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 WDR33Q9C0J8 1336 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 TRIM29Q14134 588 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 HOMER1Q86YM7 354 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 ANO2Q9NQ90 1003 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 TXLNBQ8N3L3 684 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 AK7Q96M32 723 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 SAFBQ15424 915 aaKnown RBP eCLIP7.42□□□□□ -1.224e-6■□□□□ 10.9
PRPF4B-205ENST00000480058 BICD2Q8TD16 824 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 EID1Q9Y6B2 187 aa7.42□□□□□ -1.22
PRPF4B-205ENST00000480058 DHX16O60231 1041 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 TRDNQ13061 729 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 RASSF8Q8NHQ8 419 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 SRCIN1Q9C0H9 1055 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 TEFQ10587 303 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 RPAP2Q8IXW5 612 aaPredicted RBP7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 AMPHP49418 695 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 LRRC9Q6ZRR7 1453 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 TPRNQ4KMQ1 711 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 EIF4G1Q04637 1599 aaKnown RBP7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 ANKRD1Q15327 319 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 TPD52L1Q16890 204 aaPredicted RBP7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 SLC4A10Q6U841 1118 aa7.41□□□□□ -1.22
PRPF4B-205ENST00000480058 ZBTB7CA1YPR0 619 aa7.4□□□□□ -1.22
PRPF4B-205ENST00000480058 ZSCAN31Q96LW9 406 aaPredicted RBP7.4□□□□□ -1.22
PRPF4B-205ENST00000480058 TAF7LQ5H9L4 462 aa7.4□□□□□ -1.22
PRPF4B-205ENST00000480058 PLEKHH2Q8IVE3 1493 aa7.4□□□□□ -1.23
PRPF4B-205ENST00000480058 C11orf95C9JLR9 678 aaPredicted RBP7.4□□□□□ -1.23
PRPF4B-205ENST00000480058 ERLIN1O75477 346 aa7.4□□□□□ -1.23
PRPF4B-205ENST00000480058 IFIT2P09913 472 aaKnown RBP7.4□□□□□ -1.23
PRPF4B-205ENST00000480058 LMOD2Q6P5Q4 547 aa7.4□□□□□ -1.23
PRPF4B-205ENST00000480058 CLASRPQ8N2M8 674 aaKnown RBP7.4□□□□□ -1.23
PRPF4B-205ENST00000480058 CCDC192P0DO97 292 aa7.4□□□□□ -1.23
PRPF4B-205ENST00000480058 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 IFT57Q9NWB7 429 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 TUBB4AP04350 444 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 RIPK4P57078 832 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 CCDC146Q8IYE0 955 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 SDF4Q9BRK5 362 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 PTPRGP23470 1445 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms