RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 PZPP20742 1482 aa14.45□□□□□ -0.1
CHD6-208ENST00000480022 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
CHD6-208ENST00000480022 MRS2Q9HD23 443 aa14.44□□□□□ -0.1
CHD6-208ENST00000480022 ABCC3O15438 1527 aa14.44□□□□□ -0.1
CHD6-208ENST00000480022 MPHOSPH9Q99550 1183 aa14.44□□□□□ -0.1
CHD6-208ENST00000480022 IQGAP3Q86VI3 1631 aa14.43□□□□□ -0.1
CHD6-208ENST00000480022 FRAT1Q92837 279 aaPredicted RBP14.43□□□□□ -0.1
CHD6-208ENST00000480022 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
CHD6-208ENST00000480022 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
CHD6-208ENST00000480022 LMTK2Q8IWU2 1503 aa14.43□□□□□ -0.1
CHD6-208ENST00000480022 ESF1Q9H501 851 aaKnown RBP14.42□□□□□ -0.1
CHD6-208ENST00000480022 CNTLNQ9NXG0 1405 aa14.42□□□□□ -0.1
CHD6-208ENST00000480022 ZMYND15Q9H091 742 aa14.42□□□□□ -0.1
CHD6-208ENST00000480022 PDE4AP27815 886 aa14.41□□□□□ -0.1
CHD6-208ENST00000480022 PRKRIP1Q9H875 184 aaPredicted RBP14.41□□□□□ -0.1
CHD6-208ENST00000480022 NUDCQ9Y266 331 aa14.41□□□□□ -0.1
CHD6-208ENST00000480022 NFKBIBQ15653 356 aa14.4□□□□□ -0.1
CHD6-208ENST00000480022 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
CHD6-208ENST00000480022 PKD2Q13563 968 aa14.4□□□□□ -0.1
CHD6-208ENST00000480022 VSIG10Q8N0Z9 540 aa14.4□□□□□ -0.1
CHD6-208ENST00000480022 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
CHD6-208ENST00000480022 ZC3H13Q5T200 1668 aaKnown RBP14.39□□□□□ -0.11
CHD6-208ENST00000480022 CEP152O94986 1710 aa14.39□□□□□ -0.11
CHD6-208ENST00000480022 BACH2Q9BYV9 841 aa14.39□□□□□ -0.11
CHD6-208ENST00000480022 CLTCQ00610 1675 aaKnown RBP14.38□□□□□ -0.11
CHD6-208ENST00000480022 MADDQ8WXG6 1647 aa14.38□□□□□ -0.11
CHD6-208ENST00000480022 ZMYM3Q14202 1370 aa14.38□□□□□ -0.11
CHD6-208ENST00000480022 FOXD1Q16676 465 aa14.38□□□□□ -0.11
CHD6-208ENST00000480022 EFCAB6Q5THR3 1501 aa14.38□□□□□ -0.11
CHD6-208ENST00000480022 TET3O43151 1660 aa14.37□□□□□ -0.11
CHD6-208ENST00000480022 NPATQ14207 1427 aa14.37□□□□□ -0.11
CHD6-208ENST00000480022 KDM4FA0A1W2PPD8 638 aa14.37□□□□□ -0.11
CHD6-208ENST00000480022 ARHGAP31Q2M1Z3 1444 aa14.37□□□□□ -0.11
CHD6-208ENST00000480022 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
CHD6-208ENST00000480022 FER1L4A9Z1Z3 1794 aa14.36□□□□□ -0.11
CHD6-208ENST00000480022 HSPA5P11021 654 aaKnown RBP14.36□□□□□ -0.11
CHD6-208ENST00000480022 MS4A1P11836 297 aa14.36□□□□□ -0.11
CHD6-208ENST00000480022 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
CHD6-208ENST00000480022 PDE4CQ08493 712 aa14.35□□□□□ -0.11
CHD6-208ENST00000480022 RPRD2Q5VT52 1461 aaKnown RBP14.34□□□□□ -0.11
CHD6-208ENST00000480022 FBXO31Q5XUX0 539 aaPredicted RBP14.34□□□□□ -0.11
CHD6-208ENST00000480022 E9PCH4 1651 aa14.34□□□□□ -0.11
CHD6-208ENST00000480022 MROH2AA6NES4 1674 aa14.33□□□□□ -0.11
CHD6-208ENST00000480022 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.11
CHD6-208ENST00000480022 PTPRMP28827 1452 aa14.31□□□□□ -0.12
CHD6-208ENST00000480022 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
CHD6-208ENST00000480022 PTPRTO14522 1441 aa14.31□□□□□ -0.12
CHD6-208ENST00000480022 ERVK-7P63135 1459 aa14.31□□□□□ -0.12
CHD6-208ENST00000480022 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
CHD6-208ENST00000480022 NOS1P29475 1434 aa14.3□□□□□ -0.12
CHD6-208ENST00000480022 EIF4G2P78344 907 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHD6-208ENST00000480022 DCAF11Q8TEB1 546 aa14.3□□□□□ -0.12
CHD6-208ENST00000480022 C3P01024 1663 aa14.3□□□□□ -0.12
CHD6-208ENST00000480022 SPATA31D1Q6ZQQ2 1576 aa14.28□□□□□ -0.12
CHD6-208ENST00000480022 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
CHD6-208ENST00000480022 PREX1Q8TCU6 1659 aa14.27□□□□□ -0.13
CHD6-208ENST00000480022 TRPM2O94759 1503 aa14.26□□□□□ -0.13
CHD6-208ENST00000480022 TNRQ92752 1358 aa14.26□□□□□ -0.13
CHD6-208ENST00000480022 SYNMO15061 1565 aa14.26□□□□□ -0.13
CHD6-208ENST00000480022 HSP90AA2PQ14568 343 aaPredicted RBP14.26□□□□□ -0.13
CHD6-208ENST00000480022 RRP9O43818 475 aaKnown RBP14.25□□□□□ -0.13
CHD6-208ENST00000480022 SPHKAPQ2M3C7 1700 aa14.25□□□□□ -0.13
CHD6-208ENST00000480022 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
CHD6-208ENST00000480022 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
CHD6-208ENST00000480022 SLC52A1Q9NWF4 448 aa14.24□□□□□ -0.13
CHD6-208ENST00000480022 CCDC144AA2RUR9 1427 aa14.24□□□□□ -0.13
CHD6-208ENST00000480022 IDI1Q13907 227 aa14.23□□□□□ -0.13
CHD6-208ENST00000480022 EXOC6Q8TAG9 804 aa14.23□□□□□ -0.13
CHD6-208ENST00000480022 FRAT2O75474 233 aaPredicted RBP14.22□□□□□ -0.13
CHD6-208ENST00000480022 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
CHD6-208ENST00000480022 RRP1P56182 461 aaKnown RBP14.22□□□□□ -0.13
CHD6-208ENST00000480022 CLTCL1P53675 1640 aa14.21□□□□□ -0.13
CHD6-208ENST00000480022 CFAP65Q6ZU64 1925 aaKnown RBP14.21□□□□□ -0.13
CHD6-208ENST00000480022 HSP90AA1P07900 732 aaKnown RBP14.21□□□□□ -0.14
CHD6-208ENST00000480022 PIK3C2BO00750 1634 aa14.2□□□□□ -0.14
CHD6-208ENST00000480022 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
CHD6-208ENST00000480022 NLRP1Q9C000 1473 aa14.19□□□□□ -0.14
CHD6-208ENST00000480022 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
CHD6-208ENST00000480022 CHGAP10645 457 aaKnown RBP14.18□□□□□ -0.14
CHD6-208ENST00000480022 MYO3AQ8NEV4 1616 aa14.17□□□□□ -0.14
CHD6-208ENST00000480022 SPATA31E1Q6ZUB1 1445 aa14.16□□□□□ -0.14
CHD6-208ENST00000480022 A2ML1A8K2U0 1454 aa14.15□□□□□ -0.14
CHD6-208ENST00000480022 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
CHD6-208ENST00000480022 L1TD1Q5T7N2 865 aaKnown RBP14.15□□□□□ -0.14
CHD6-208ENST00000480022 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
CHD6-208ENST00000480022 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
CHD6-208ENST00000480022 RGL3Q3MIN7 710 aa14.15□□□□□ -0.14
CHD6-208ENST00000480022 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
CHD6-208ENST00000480022 ADGRB3O60242 1522 aa14.14□□□□□ -0.15
CHD6-208ENST00000480022 CEP170BQ9Y4F5 1589 aaPredicted RBP14.14□□□□□ -0.15
CHD6-208ENST00000480022 TMEM131LA2VDJ0 1609 aa14.14□□□□□ -0.15
CHD6-208ENST00000480022 KIF7Q2M1P5 1343 aa14.14□□□□□ -0.15
CHD6-208ENST00000480022 POLR1AO95602 1720 aaPredicted RBP14.13□□□□□ -0.15
CHD6-208ENST00000480022 ZNF326Q5BKZ1 582 aaKnown RBP14.12□□□□□ -0.15
CHD6-208ENST00000480022 RCAN3Q9UKA8 241 aa14.12□□□□□ -0.15
CHD6-208ENST00000480022 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
CHD6-208ENST00000480022 TAF7LQ5H9L4 462 aa14.11□□□□□ -0.15
CHD6-208ENST00000480022 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
CHD6-208ENST00000480022 CLCN1P35523 988 aa14.11□□□□□ -0.15
CHD6-208ENST00000480022 THEMISQ8N1K5 641 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms