RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 PROSER2Q86WR7 435 aaPredicted RBP12□□□□□ -0.49
HMGCL-205ENST00000479458 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
HMGCL-205ENST00000479458 MYOM3Q5VTT5 1437 aa12□□□□□ -0.49
HMGCL-205ENST00000479458 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
HMGCL-205ENST00000479458 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
HMGCL-205ENST00000479458 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
HMGCL-205ENST00000479458 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
HMGCL-205ENST00000479458 MROH1Q8NDA8 1641 aa11.97□□□□□ -0.49
HMGCL-205ENST00000479458 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.49
HMGCL-205ENST00000479458 RGS12O14924 1447 aa11.96□□□□□ -0.49
HMGCL-205ENST00000479458 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
HMGCL-205ENST00000479458 CHD2O14647 1828 aaKnown RBP11.95□□□□□ -0.5
HMGCL-205ENST00000479458 DIP2AQ14689 1571 aa11.95□□□□□ -0.5
HMGCL-205ENST00000479458 PIK3C2BO00750 1634 aa11.94□□□□□ -0.5
HMGCL-205ENST00000479458 CEP152O94986 1710 aa11.94□□□□□ -0.5
HMGCL-205ENST00000479458 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
HMGCL-205ENST00000479458 EFCAB6Q5THR3 1501 aa11.93□□□□□ -0.5
HMGCL-205ENST00000479458 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
HMGCL-205ENST00000479458 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
HMGCL-205ENST00000479458 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
HMGCL-205ENST00000479458 AFF2P51816 1311 aa11.92□□□□□ -0.5
HMGCL-205ENST00000479458 ZBTB22O15209 634 aa11.92□□□□□ -0.5
HMGCL-205ENST00000479458 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
HMGCL-205ENST00000479458 EP400Q96L91 3159 aa11.91□□□□□ -0.5
HMGCL-205ENST00000479458 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
HMGCL-205ENST00000479458 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
HMGCL-205ENST00000479458 SETD5Q9C0A6 1442 aa11.91□□□□□ -0.5
HMGCL-205ENST00000479458 CADPS2Q86UW7 1296 aa11.9□□□□□ -0.5
HMGCL-205ENST00000479458 NGLY1Q96IV0 654 aa11.9□□□□□ -0.5
HMGCL-205ENST00000479458 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
HMGCL-205ENST00000479458 SLC26A8Q96RN1 970 aa11.89□□□□□ -0.51
HMGCL-205ENST00000479458 QTRT2Q9H974 415 aaKnown RBP11.89□□□□□ -0.51
HMGCL-205ENST00000479458 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
HMGCL-205ENST00000479458 LRP5O75197 1615 aa11.89□□□□□ -0.51
HMGCL-205ENST00000479458 NUTM2BA6NNL0 878 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-205ENST00000479458 NUTM2EB1AL46 878 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-205ENST00000479458 NUTM2DQ5VT03 806 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-205ENST00000479458 NUTM2AQ8IVF1 878 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-205ENST00000479458 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-205ENST00000479458 ABCC5O15440 1437 aa11.87□□□□□ -0.51
HMGCL-205ENST00000479458 C19orf44Q9H6X5 657 aa11.87□□□□□ -0.51
HMGCL-205ENST00000479458 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
HMGCL-205ENST00000479458 DAPK1P53355 1430 aa11.86□□□□□ -0.51
HMGCL-205ENST00000479458 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
HMGCL-205ENST00000479458 IDI1Q13907 227 aa11.85□□□□□ -0.51
HMGCL-205ENST00000479458 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
HMGCL-205ENST00000479458 DCCP43146 1447 aa11.85□□□□□ -0.51
HMGCL-205ENST00000479458 PIK3R4Q99570 1358 aa11.84□□□□□ -0.51
HMGCL-205ENST00000479458 PLEKHG1Q9ULL1 1385 aa11.84□□□□□ -0.51
HMGCL-205ENST00000479458 PPARGC1BQ86YN6 1023 aaKnown RBP11.84□□□□□ -0.51
HMGCL-205ENST00000479458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
HMGCL-205ENST00000479458 TBX22Q9Y458 520 aa11.84□□□□□ -0.51
HMGCL-205ENST00000479458 NHSL1Q5SYE7 1610 aa11.84□□□□□ -0.51
HMGCL-205ENST00000479458 ADGRB3O60242 1522 aa11.84□□□□□ -0.51
HMGCL-205ENST00000479458 LMTK2Q8IWU2 1503 aa11.83□□□□□ -0.52
HMGCL-205ENST00000479458 ATF3P18847 181 aa11.83□□□□□ -0.52
HMGCL-205ENST00000479458 BRINP3Q76B58 766 aa11.83□□□□□ -0.52
HMGCL-205ENST00000479458 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
HMGCL-205ENST00000479458 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
HMGCL-205ENST00000479458 ZFYVE9O95405 1425 aa11.82□□□□□ -0.52
HMGCL-205ENST00000479458 NOS1P29475 1434 aa11.82□□□□□ -0.52
HMGCL-205ENST00000479458 ERBINQ96RT1 1412 aa11.81□□□□□ -0.52
HMGCL-205ENST00000479458 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
HMGCL-205ENST00000479458 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
HMGCL-205ENST00000479458 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
HMGCL-205ENST00000479458 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
HMGCL-205ENST00000479458 C8orf37Q96NL8 207 aa11.8□□□□□ -0.52
HMGCL-205ENST00000479458 TRPC5Q9UL62 973 aaPredicted RBP11.8□□□□□ -0.52
HMGCL-205ENST00000479458 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
HMGCL-205ENST00000479458 ADGRL2O95490 1459 aa11.79□□□□□ -0.52
HMGCL-205ENST00000479458 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-205ENST00000479458 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
HMGCL-205ENST00000479458 CHIC2Q9UKJ5 165 aa11.78□□□□□ -0.52
HMGCL-205ENST00000479458 ATRNO75882 1429 aa11.77□□□□□ -0.52
HMGCL-205ENST00000479458 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.52
HMGCL-205ENST00000479458 RRP7BPQ9NSQ0 103 aa11.77□□□□□ -0.53
HMGCL-205ENST00000479458 LAMC1P11047 1609 aa11.77□□□□□ -0.53
HMGCL-205ENST00000479458 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-205ENST00000479458 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
HMGCL-205ENST00000479458 KANK1Q14678 1352 aa11.76□□□□□ -0.53
HMGCL-205ENST00000479458 PTCH1Q13635 1447 aa11.76□□□□□ -0.53
HMGCL-205ENST00000479458 ADAMTS13Q76LX8 1427 aa11.76□□□□□ -0.53
HMGCL-205ENST00000479458 USP21Q9UK80 565 aa11.75□□□□□ -0.53
HMGCL-205ENST00000479458 MST1RQ04912 1400 aa11.75□□□□□ -0.53
HMGCL-205ENST00000479458 BCANQ96GW7 911 aa11.74□□□□□ -0.53
HMGCL-205ENST00000479458 RPRD2Q5VT52 1461 aaKnown RBP11.74□□□□□ -0.53
HMGCL-205ENST00000479458 MYO5BQ9ULV0 1848 aa11.74□□□□□ -0.53
HMGCL-205ENST00000479458 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
HMGCL-205ENST00000479458 RIMS2Q9UQ26 1411 aa11.73□□□□□ -0.53
HMGCL-205ENST00000479458 SPHKAPQ2M3C7 1700 aa11.72□□□□□ -0.53
HMGCL-205ENST00000479458 TMEM131LA2VDJ0 1609 aa11.72□□□□□ -0.53
HMGCL-205ENST00000479458 ROCK1Q13464 1354 aa11.72□□□□□ -0.53
HMGCL-205ENST00000479458 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-205ENST00000479458 UNC13BO14795 1591 aa11.71□□□□□ -0.53
HMGCL-205ENST00000479458 TRPM2O94759 1503 aa11.71□□□□□ -0.53
HMGCL-205ENST00000479458 ANKRD50Q9ULJ7 1429 aa11.71□□□□□ -0.53
HMGCL-205ENST00000479458 PPP1R15AO75807 674 aaPredicted RBP11.71□□□□□ -0.53
HMGCL-205ENST00000479458 BCL9LQ86UU0 1499 aa11.7□□□□□ -0.54
HMGCL-205ENST00000479458 ITGAEP38570 1179 aa11.7□□□□□ -0.54
HMGCL-205ENST00000479458 COL22A1Q8NFW1 1626 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms