RNA–Protein interactions for RNA: ENST00000479402.1

ACTR3B-204, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2

Gene ACTR3B, Length 5,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-204ENST00000479402 C1orf141Q5JVX7 400 aa14.97□□□□□ -0.01
ACTR3B-204ENST00000479402 RNF20Q5VTR2 975 aa14.97□□□□□ -0.01
ACTR3B-204ENST00000479402 FOXD4L5Q5VV16 416 aaPredicted RBP14.97□□□□□ -0.01
ACTR3B-204ENST00000479402 FOXD4L4Q8WXT5 416 aaPredicted RBP14.97□□□□□ -0.01
ACTR3B-204ENST00000479402 CCDC7Q96M83 1385 aa14.96□□□□□ -0.01
ACTR3B-204ENST00000479402 PLIN1O60240 522 aa14.96□□□□□ -0.01
ACTR3B-204ENST00000479402 MARCH6O60337 910 aa14.96□□□□□ -0.01
ACTR3B-204ENST00000479402 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
ACTR3B-204ENST00000479402 TEX35Q5T0J7 233 aa14.96□□□□□ -0.02
ACTR3B-204ENST00000479402 ANKRD20A12PQ8NF67 263 aa14.96□□□□□ -0.02
ACTR3B-204ENST00000479402 CCDC47Q96A33 483 aaKnown RBP14.96□□□□□ -0.02
ACTR3B-204ENST00000479402 TRIM29Q14134 588 aa14.95□□□□□ -0.02
ACTR3B-204ENST00000479402 CREBRFQ8IUR6 639 aa14.95□□□□□ -0.02
ACTR3B-204ENST00000479402 DIAPH1O60610 1272 aaKnown RBP14.95□□□□□ -0.02
ACTR3B-204ENST00000479402 NEXNQ0ZGT2 675 aa14.95□□□□□ -0.02
ACTR3B-204ENST00000479402 HSP90AB4PQ58FF6 505 aa14.94□□□□□ -0.02
ACTR3B-204ENST00000479402 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
ACTR3B-204ENST00000479402 ANO2Q9NQ90 1003 aa14.93□□□□□ -0.02
ACTR3B-204ENST00000479402 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
ACTR3B-204ENST00000479402 APAF1O14727 1248 aa14.92□□□□□ -0.02
ACTR3B-204ENST00000479402 SLC4A3P48751 1232 aa14.92□□□□□ -0.02
ACTR3B-204ENST00000479402 IPO7O95373 1038 aaKnown RBP14.92□□□□□ -0.02
ACTR3B-204ENST00000479402 MTERF4Q7Z6M4 381 aaKnown RBP14.92□□□□□ -0.02
ACTR3B-204ENST00000479402 G3V3G9 751 aa14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 DCAF8Q5TAQ9 597 aa14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 AMOTL1Q8IY63 956 aa14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 IFIT2P09913 472 aaKnown RBP14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 GNAI1P63096 354 aa14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 BCL2L13Q9BXK5 485 aa14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 JPH4Q96JJ6 628 aa14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 PES1O00541 588 aaKnown RBP14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 DDX58O95786 925 aaKnown RBP14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 ZNF771Q7L3S4 317 aaPredicted RBP14.91□□□□□ -0.02
ACTR3B-204ENST00000479402 FRAT2O75474 233 aaPredicted RBP14.9□□□□□ -0.02
ACTR3B-204ENST00000479402 CCDC39Q9UFE4 941 aa14.9□□□□□ -0.02
ACTR3B-204ENST00000479402 MRE11P49959 708 aa14.9□□□□□ -0.02
ACTR3B-204ENST00000479402 TEFQ10587 303 aa14.9□□□□□ -0.02
ACTR3B-204ENST00000479402 LETM1O95202 739 aaPredicted RBP14.9□□□□□ -0.02
ACTR3B-204ENST00000479402 MCTP1Q6DN14 999 aa14.9□□□□□ -0.02
ACTR3B-204ENST00000479402 ERC2O15083 957 aa14.89□□□□□ -0.03
ACTR3B-204ENST00000479402 ARGLU1Q9NWB6 273 aaPredicted RBP14.89□□□□□ -0.03
ACTR3B-204ENST00000479402 ACBD3Q9H3P7 528 aa14.89□□□□□ -0.03
ACTR3B-204ENST00000479402 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
ACTR3B-204ENST00000479402 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
ACTR3B-204ENST00000479402 C22orf23Q9BZE7 217 aa14.89□□□□□ -0.03
ACTR3B-204ENST00000479402 CDC45O75419 566 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 SASS6Q6UVJ0 657 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 MAP7D2Q96T17 732 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 C9orf78Q9NZ63 289 aaPredicted RBP14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 SMC3Q9UQE7 1217 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 RIPK4P57078 832 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 CCAR2Q8N163 923 aaKnown RBP14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 BICD2Q8TD16 824 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 LTV1Q96GA3 475 aaPredicted RBP14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 NINLQ9Y2I6 1382 aa14.88□□□□□ -0.03
ACTR3B-204ENST00000479402 CPLX1O14810 134 aa14.87□□□□□ -0.03
ACTR3B-204ENST00000479402 NUTM2DQ5VT03 806 aaPredicted RBP14.87□□□□□ -0.03
ACTR3B-204ENST00000479402 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
ACTR3B-204ENST00000479402 SCAPERQ9BY12 1400 aa14.87□□□□□ -0.03
ACTR3B-204ENST00000479402 KIF7Q2M1P5 1343 aa14.87□□□□□ -0.03
ACTR3B-204ENST00000479402 PTPRGP23470 1445 aa14.87□□□□□ -0.03
ACTR3B-204ENST00000479402 NOL10Q9BSC4 688 aaKnown RBP14.87□□□□□ -0.03
ACTR3B-204ENST00000479402 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
ACTR3B-204ENST00000479402 GTF2E1P29083 439 aaPredicted RBP14.86□□□□□ -0.03
ACTR3B-204ENST00000479402 TRDNQ13061 729 aa14.86□□□□□ -0.03
ACTR3B-204ENST00000479402 ZNF592Q92610 1267 aa14.86□□□□□ -0.03
ACTR3B-204ENST00000479402 ELL2O00472 640 aaPredicted RBP14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 G3BP1Q13283 466 aaKnown RBP eCLIP14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 VPS53Q5VIR6 699 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 VSIG10Q8N0Z9 540 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 CDR1P51861 262 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 CCDC73Q6ZRK6 1079 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 NAT10Q9H0A0 1025 aaKnown RBP14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 KIF21BO75037 1637 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 WWC1Q8IX03 1113 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
ACTR3B-204ENST00000479402 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
ACTR3B-204ENST00000479402 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.84□□□□□ -0.03
ACTR3B-204ENST00000479402 AK7Q96M32 723 aa14.83□□□□□ -0.03
ACTR3B-204ENST00000479402 NFKBIBQ15653 356 aa14.83□□□□□ -0.04
ACTR3B-204ENST00000479402 NOM1Q5C9Z4 860 aaKnown RBP14.83□□□□□ -0.04
ACTR3B-204ENST00000479402 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.04
ACTR3B-204ENST00000479402 PSMA5P28066 241 aa14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 MCM2P49736 904 aa14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 PCMTD1Q96MG8 357 aaPredicted RBP14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 MBD3O95983 291 aa14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 CCDC9Q9Y3X0 531 aaKnown RBP14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 CASKIN1Q8WXD9 1431 aa14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 ERICH2A1L162 156 aa14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 DHX8Q14562 1220 aaKnown RBP14.82□□□□□ -0.04
ACTR3B-204ENST00000479402 SAFBQ15424 915 aaKnown RBP eCLIP14.81□□□□□ -0.04
ACTR3B-204ENST00000479402 CCP110O43303 1012 aa14.81□□□□□ -0.04
ACTR3B-204ENST00000479402 FOXD4L6Q3SYB3 417 aaPredicted RBP14.81□□□□□ -0.04
ACTR3B-204ENST00000479402 FOXD4L3Q6VB84 417 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms