RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
COL13A1-207ENST00000478219 CALD1Q05682 793 aaKnown RBP12.54□□□□□ -0.4
COL13A1-207ENST00000478219 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
COL13A1-207ENST00000478219 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
COL13A1-207ENST00000478219 TESK2Q96S53 571 aa12.53□□□□□ -0.4
COL13A1-207ENST00000478219 TRIM44Q96DX7 344 aaPredicted RBP12.53□□□□□ -0.4
COL13A1-207ENST00000478219 ADGBQ8N7X0 1667 aa12.52□□□□□ -0.4
COL13A1-207ENST00000478219 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
COL13A1-207ENST00000478219 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.4
COL13A1-207ENST00000478219 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.4
COL13A1-207ENST00000478219 PPP2R1AP30153 589 aa12.52□□□□□ -0.41
COL13A1-207ENST00000478219 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL13A1-207ENST00000478219 TNNQ9UQP3 1299 aa12.52□□□□□ -0.41
COL13A1-207ENST00000478219 ZNF777Q9ULD5 760 aaPredicted RBP12.51□□□□□ -0.41
COL13A1-207ENST00000478219 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
COL13A1-207ENST00000478219 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
COL13A1-207ENST00000478219 NUP155O75694 1391 aa12.51□□□□□ -0.41
COL13A1-207ENST00000478219 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
COL13A1-207ENST00000478219 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
COL13A1-207ENST00000478219 APAF1O14727 1248 aa12.5□□□□□ -0.41
COL13A1-207ENST00000478219 ARID3AQ99856 593 aa12.5□□□□□ -0.41
COL13A1-207ENST00000478219 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
COL13A1-207ENST00000478219 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
COL13A1-207ENST00000478219 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
COL13A1-207ENST00000478219 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
COL13A1-207ENST00000478219 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
COL13A1-207ENST00000478219 AAMPQ13685 434 aa12.48□□□□□ -0.41
COL13A1-207ENST00000478219 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
COL13A1-207ENST00000478219 ANKRD50Q9ULJ7 1429 aa12.48□□□□□ -0.41
COL13A1-207ENST00000478219 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
COL13A1-207ENST00000478219 RLBP1P12271 317 aa12.47□□□□□ -0.41
COL13A1-207ENST00000478219 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
COL13A1-207ENST00000478219 PRAG1Q86YV5 1406 aa12.47□□□□□ -0.41
COL13A1-207ENST00000478219 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
COL13A1-207ENST00000478219 KDM5DQ9BY66 1539 aa12.46□□□□□ -0.41
COL13A1-207ENST00000478219 MAGI2Q86UL8 1455 aa12.46□□□□□ -0.41
COL13A1-207ENST00000478219 KIAA0556O60303 1618 aa12.46□□□□□ -0.41
COL13A1-207ENST00000478219 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
COL13A1-207ENST00000478219 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
COL13A1-207ENST00000478219 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
COL13A1-207ENST00000478219 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
COL13A1-207ENST00000478219 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.42
COL13A1-207ENST00000478219 PDE3AQ14432 1141 aa12.46□□□□□ -0.42
COL13A1-207ENST00000478219 HOMEZQ8IX15 550 aa12.46□□□□□ -0.42
COL13A1-207ENST00000478219 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.42
COL13A1-207ENST00000478219 ADGRL2O95490 1459 aa12.46□□□□□ -0.42
COL13A1-207ENST00000478219 OFD1O75665 1012 aa12.45□□□□□ -0.42
COL13A1-207ENST00000478219 DDIT3P35638 169 aa12.45□□□□□ -0.42
COL13A1-207ENST00000478219 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
COL13A1-207ENST00000478219 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
COL13A1-207ENST00000478219 ADCY10Q96PN6 1610 aa12.45□□□□□ -0.42
COL13A1-207ENST00000478219 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
COL13A1-207ENST00000478219 R3HCC1Q9Y3T6 440 aaKnown RBP12.44□□□□□ -0.42
COL13A1-207ENST00000478219 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
COL13A1-207ENST00000478219 ZSCAN30Q86W11 494 aa12.43□□□□□ -0.42
COL13A1-207ENST00000478219 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
COL13A1-207ENST00000478219 CLASP1Q7Z460 1538 aa12.43□□□□□ -0.42
COL13A1-207ENST00000478219 PRG4Q92954 1404 aaPredicted RBP12.43□□□□□ -0.42
COL13A1-207ENST00000478219 E9PSI1 815 aa12.42□□□□□ -0.42
COL13A1-207ENST00000478219 ZHX1Q9UKY1 873 aaPredicted RBP12.42□□□□□ -0.42
COL13A1-207ENST00000478219 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
COL13A1-207ENST00000478219 ANKRD30AQ9BXX3 1397 aa12.42□□□□□ -0.42
COL13A1-207ENST00000478219 PPP1R9BQ96SB3 815 aa12.42□□□□□ -0.42
COL13A1-207ENST00000478219 EIF4G3O43432 1585 aaKnown RBP12.42□□□□□ -0.42
COL13A1-207ENST00000478219 NUP153P49790 1475 aaKnown RBP12.42□□□□□ -0.42
COL13A1-207ENST00000478219 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
COL13A1-207ENST00000478219 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
COL13A1-207ENST00000478219 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
COL13A1-207ENST00000478219 TPRNQ4KMQ1 711 aa12.41□□□□□ -0.42
COL13A1-207ENST00000478219 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
COL13A1-207ENST00000478219 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
COL13A1-207ENST00000478219 NASPP49321 788 aaPredicted RBP12.4□□□□□ -0.42
COL13A1-207ENST00000478219 TMF1P82094 1093 aa12.4□□□□□ -0.42
COL13A1-207ENST00000478219 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
COL13A1-207ENST00000478219 HSCBQ8IWL3 235 aa12.4□□□□□ -0.42
COL13A1-207ENST00000478219 PMFBP1Q8TBY8 1022 aa12.4□□□□□ -0.42
COL13A1-207ENST00000478219 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
COL13A1-207ENST00000478219 TROQ12816 1431 aaPredicted RBP12.4□□□□□ -0.43
COL13A1-207ENST00000478219 PRDM15P57071 1507 aaPredicted RBP12.39□□□□□ -0.43
COL13A1-207ENST00000478219 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
COL13A1-207ENST00000478219 CCDC173Q0VFZ6 552 aa12.39□□□□□ -0.43
COL13A1-207ENST00000478219 GPATCH8Q9UKJ3 1502 aaKnown RBP12.39□□□□□ -0.43
COL13A1-207ENST00000478219 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
COL13A1-207ENST00000478219 FGD1P98174 961 aa12.38□□□□□ -0.43
COL13A1-207ENST00000478219 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.38□□□□□ -0.43
COL13A1-207ENST00000478219 A2MP01023 1474 aa12.38□□□□□ -0.43
COL13A1-207ENST00000478219 UQCRHLA0A096LP55 91 aa12.37□□□□□ -0.43
COL13A1-207ENST00000478219 UQCRHP07919 91 aa12.37□□□□□ -0.43
COL13A1-207ENST00000478219 MSNP26038 577 aaKnown RBP12.37□□□□□ -0.43
COL13A1-207ENST00000478219 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
COL13A1-207ENST00000478219 RAB3GAP1Q15042 981 aa12.37□□□□□ -0.43
COL13A1-207ENST00000478219 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
COL13A1-207ENST00000478219 WWC1Q8IX03 1113 aa12.37□□□□□ -0.43
COL13A1-207ENST00000478219 SHANK2Q9UPX8 1470 aa12.37□□□□□ -0.43
COL13A1-207ENST00000478219 RRP7AQ9Y3A4 280 aaKnown RBP12.36□□□□□ -0.43
COL13A1-207ENST00000478219 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
COL13A1-207ENST00000478219 JARID2Q92833 1246 aaPredicted RBP12.36□□□□□ -0.43
COL13A1-207ENST00000478219 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
COL13A1-207ENST00000478219 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
COL13A1-207ENST00000478219 ZMYM3Q14202 1370 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms