RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 EFCAB6Q5THR3 1501 aa6.14□□□□□ -1.43
RGPD5-209ENST00000477523 SCAF11Q99590 1463 aaKnown RBP6.14□□□□□ -1.43
RGPD5-209ENST00000477523 COL17A1Q9UMD9 1497 aaPredicted RBP6.14□□□□□ -1.43
RGPD5-209ENST00000477523 THEMISQ8N1K5 641 aaPredicted RBP6.14□□□□□ -1.43
RGPD5-209ENST00000477523 EVC2Q86UK5 1308 aa6.14□□□□□ -1.43
RGPD5-209ENST00000477523 EIF2AK4Q9P2K8 1649 aaKnown RBP6.13□□□□□ -1.43
RGPD5-209ENST00000477523 TXNDC2Q86VQ3 553 aa6.13□□□□□ -1.43
RGPD5-209ENST00000477523 MINK1Q8N4C8 1332 aaPredicted RBP6.12□□□□□ -1.43
RGPD5-209ENST00000477523 AGLP35573 1532 aa6.12□□□□□ -1.43
RGPD5-209ENST00000477523 TET3O43151 1660 aa6.12□□□□□ -1.43
RGPD5-209ENST00000477523 NLRP13Q86W25 1043 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 ZMYM4Q5VZL5 1548 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 UGGT1Q9NYU2 1555 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 PELP1Q8IZL8 1130 aaKnown RBP6.11□□□□□ -1.43
RGPD5-209ENST00000477523 TESK2Q96S53 571 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 FRMPD1Q5SYB0 1578 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 WDR43Q15061 677 aaKnown RBP eCLIP6.11□□□□□ -1.43
RGPD5-209ENST00000477523 KIDINS220Q9ULH0 1771 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 MAP3K4Q9Y6R4 1608 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 ABCA6Q8N139 1617 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 HDGFL2Q7Z4V5 671 aaPredicted RBP6.11□□□□□ -1.43
RGPD5-209ENST00000477523 TERF2IPQ9NYB0 399 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 VWDEQ8N2E2 1590 aa6.11□□□□□ -1.43
RGPD5-209ENST00000477523 MYBBP1AQ9BQG0 1328 aaKnown RBP6.11□□□□□ -1.43
RGPD5-209ENST00000477523 C14orf37Q86TY3 774 aa6.1□□□□□ -1.43
RGPD5-209ENST00000477523 PRAM1Q96QH2 718 aa6.1□□□□□ -1.43
RGPD5-209ENST00000477523 RIMS2Q9UQ26 1411 aa6.1□□□□□ -1.43
RGPD5-209ENST00000477523 MORC1Q86VD1 984 aa6.1□□□□□ -1.43
RGPD5-209ENST00000477523 GTF3C3Q9Y5Q9 886 aa6.1□□□□□ -1.43
RGPD5-209ENST00000477523 MYOM2P54296 1465 aa6.1□□□□□ -1.43
RGPD5-209ENST00000477523 ERVK-7P63135 1459 aa6.1□□□□□ -1.43
RGPD5-209ENST00000477523 DISP3Q9P2K9 1392 aa6.09□□□□□ -1.43
RGPD5-209ENST00000477523 CFAP53Q96M91 514 aa6.09□□□□□ -1.43
RGPD5-209ENST00000477523 SLC26A8Q96RN1 970 aa6.09□□□□□ -1.44
RGPD5-209ENST00000477523 ARHGEF40Q8TER5 1519 aa6.08□□□□□ -1.44
RGPD5-209ENST00000477523 CABP2Q9NPB3 220 aa6.08□□□□□ -1.44
RGPD5-209ENST00000477523 ANKLE2Q86XL3 938 aa6.08□□□□□ -1.44
RGPD5-209ENST00000477523 TNNT2P45379 298 aaPredicted RBP6.08□□□□□ -1.44
RGPD5-209ENST00000477523 RNF17Q9BXT8 1623 aaKnown RBP6.07□□□□□ -1.44
RGPD5-209ENST00000477523 TMEM2Q9UHN6 1383 aa6.07□□□□□ -1.44
RGPD5-209ENST00000477523 NEFMP07197 916 aa6.07□□□□□ -1.44
RGPD5-209ENST00000477523 CGNL1Q0VF96 1302 aa6.07□□□□□ -1.44
RGPD5-209ENST00000477523 SLC12A5Q9H2X9 1139 aa6.07□□□□□ -1.44
RGPD5-209ENST00000477523 MROH1Q8NDA8 1641 aa6.07□□□□□ -1.44
RGPD5-209ENST00000477523 ATAD2Q6PL18 1390 aa6.07□□□□□ -1.44
RGPD5-209ENST00000477523 CLTCL1P53675 1640 aa6.07□□□□□ -1.44
RGPD5-209ENST00000477523 PPRC1Q5VV67 1664 aaKnown RBP6.06□□□□□ -1.44
RGPD5-209ENST00000477523 PIK3C2GO75747 1445 aa6.06□□□□□ -1.44
RGPD5-209ENST00000477523 DEPDC5O75140 1603 aa6.06□□□□□ -1.44
RGPD5-209ENST00000477523 E9PCH4 1651 aa6.06□□□□□ -1.44
RGPD5-209ENST00000477523 SALL2Q9Y467 1007 aaPredicted RBP6.06□□□□□ -1.44
RGPD5-209ENST00000477523 TSPOAP1O95153 1857 aa6.06□□□□□ -1.44
RGPD5-209ENST00000477523 ZFYVE9O95405 1425 aa6.06□□□□□ -1.44
RGPD5-209ENST00000477523 SBNO2Q9Y2G9 1366 aa6.06□□□□□ -1.44
RGPD5-209ENST00000477523 ADGRB3O60242 1522 aa6.06□□□□□ -1.44
RGPD5-209ENST00000477523 YTHDC2Q9H6S0 1430 aaKnown RBP6.05□□□□□ -1.44
RGPD5-209ENST00000477523 BRD4O60885 1362 aaPredicted RBP6.05□□□□□ -1.44
RGPD5-209ENST00000477523 PUS7Q96PZ0 661 aaKnown RBP6.05□□□□□ -1.44
RGPD5-209ENST00000477523 NUTM2FA1L443 756 aa6.05□□□□□ -1.44
RGPD5-209ENST00000477523 WAPLQ7Z5K2 1190 aa6.05□□□□□ -1.44
RGPD5-209ENST00000477523 NUDCQ9Y266 331 aa6.05□□□□□ -1.44
RGPD5-209ENST00000477523 CDK19Q9BWU1 502 aa6.05□□□□□ -1.44
RGPD5-209ENST00000477523 REREQ9P2R6 1566 aa6.05□□□□□ -1.44
RGPD5-209ENST00000477523 LRPPRCP42704 1394 aaKnown RBP6.05□□□□□ -1.44
RGPD5-209ENST00000477523 A2ML1A8K2U0 1454 aa6.04□□□□□ -1.44
RGPD5-209ENST00000477523 NLRP1Q9C000 1473 aa6.04□□□□□ -1.44
RGPD5-209ENST00000477523 SENP3-EIF4A1A0A087X0R7 540 aa6.04□□□□□ -1.44
RGPD5-209ENST00000477523 TBX22Q9Y458 520 aa6.04□□□□□ -1.44
RGPD5-209ENST00000477523 PPM1GO15355 546 aaPredicted RBP6.04□□□□□ -1.44
RGPD5-209ENST00000477523 CABP1Q9NZU7 370 aa6.04□□□□□ -1.44
RGPD5-209ENST00000477523 AMOTL2Q9Y2J4 779 aa6.04□□□□□ -1.44
RGPD5-209ENST00000477523 CCDC184Q52MB2 194 aa6.03□□□□□ -1.44
RGPD5-209ENST00000477523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.03□□□□□ -1.44
RGPD5-209ENST00000477523 NGDNQ8NEJ9 315 aaKnown RBP6.03□□□□□ -1.44
RGPD5-209ENST00000477523 LTKP29376 864 aa6.03□□□□□ -1.44
RGPD5-209ENST00000477523 PPP2R1AP30153 589 aa6.03□□□□□ -1.44
RGPD5-209ENST00000477523 RICTORQ6R327 1708 aa6.03□□□□□ -1.44
RGPD5-209ENST00000477523 PER1O15534 1290 aaPredicted RBP6.03□□□□□ -1.44
RGPD5-209ENST00000477523 ABCC11Q96J66 1382 aa6.03□□□□□ -1.44
RGPD5-209ENST00000477523 WASLO00401 505 aaPredicted RBP6.03□□□□□ -1.44
RGPD5-209ENST00000477523 NINLQ9Y2I6 1382 aa6.02□□□□□ -1.44
RGPD5-209ENST00000477523 GGNBP2Q9H3C7 697 aa6.02□□□□□ -1.45
RGPD5-209ENST00000477523 CAMSAP1Q5T5Y3 1602 aa6.02□□□□□ -1.45
RGPD5-209ENST00000477523 CCDC61Q9Y6R9 512 aa6.02□□□□□ -1.45
RGPD5-209ENST00000477523 NSD3Q9BZ95 1437 aa6.02□□□□□ -1.45
RGPD5-209ENST00000477523 NEURL4Q96JN8 1562 aa6.02□□□□□ -1.45
RGPD5-209ENST00000477523 SPHKAPQ2M3C7 1700 aa6.02□□□□□ -1.45
RGPD5-209ENST00000477523 PNISRQ8TF01 805 aaKnown RBP6.02□□□□□ -1.45
RGPD5-209ENST00000477523 U2SURPO15042 1029 aaKnown RBP6.02□□□□□ -1.45
RGPD5-209ENST00000477523 NUDT16Q96DE0 195 aaKnown RBP6.02□□□□□ -1.45
RGPD5-209ENST00000477523 SIRT1Q96EB6 747 aa6.02□□□□□ -1.45
RGPD5-209ENST00000477523 MADDQ8WXG6 1647 aa6.01□□□□□ -1.45
RGPD5-209ENST00000477523 ZC3H13Q5T200 1668 aaKnown RBP6.01□□□□□ -1.45
RGPD5-209ENST00000477523 AMER1Q5JTC6 1135 aaPredicted RBP6.01□□□□□ -1.45
RGPD5-209ENST00000477523 PLEKHG1Q9ULL1 1385 aa6.01□□□□□ -1.45
RGPD5-209ENST00000477523 COG3Q96JB2 828 aa6.01□□□□□ -1.45
RGPD5-209ENST00000477523 MAPK8IP3Q9UPT6 1336 aa6.01□□□□□ -1.45
RGPD5-209ENST00000477523 NRXN1Q9ULB1 1477 aa6.01□□□□□ -1.45
RGPD5-209ENST00000477523 ZBED9Q6R2W3 1325 aa6.01□□□□□ -1.45
RGPD5-209ENST00000477523 PARD3Q8TEW0 1356 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms