RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ATP7AQ04656 1500 aa9.52□□□□□ -0.88
LDB3-206ENST00000477489 KDM5CP41229 1560 aa9.52□□□□□ -0.89
LDB3-206ENST00000477489 NEUROD1Q13562 356 aa9.52□□□□□ -0.89
LDB3-206ENST00000477489 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
LDB3-206ENST00000477489 TEX14Q8IWB6 1497 aa9.52□□□□□ -0.89
LDB3-206ENST00000477489 TRAPPC8Q9Y2L5 1435 aa9.51□□□□□ -0.89
LDB3-206ENST00000477489 TRPC6Q9Y210 931 aa9.51□□□□□ -0.89
LDB3-206ENST00000477489 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
LDB3-206ENST00000477489 CD109Q6YHK3 1445 aa9.5□□□□□ -0.89
LDB3-206ENST00000477489 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
LDB3-206ENST00000477489 MLH3Q9UHC1 1453 aa9.5□□□□□ -0.89
LDB3-206ENST00000477489 SPAG9O60271 1321 aaKnown RBP9.5□□□□□ -0.89
LDB3-206ENST00000477489 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
LDB3-206ENST00000477489 DCAF8Q5TAQ9 597 aa9.49□□□□□ -0.89
LDB3-206ENST00000477489 PCDHB13Q9Y5F0 798 aa9.49□□□□□ -0.89
LDB3-206ENST00000477489 POGZQ7Z3K3 1410 aa9.48□□□□□ -0.89
LDB3-206ENST00000477489 BMP2KQ9NSY1 1161 aaPredicted RBP9.48□□□□□ -0.89
LDB3-206ENST00000477489 VWDEQ8N2E2 1590 aa9.48□□□□□ -0.89
LDB3-206ENST00000477489 NEURL4Q96JN8 1562 aa9.48□□□□□ -0.89
LDB3-206ENST00000477489 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
LDB3-206ENST00000477489 PRDM15P57071 1507 aaPredicted RBP9.47□□□□□ -0.89
LDB3-206ENST00000477489 TIE1P35590 1138 aa9.47□□□□□ -0.89
LDB3-206ENST00000477489 ATN1P54259 1190 aaPredicted RBP9.47□□□□□ -0.89
LDB3-206ENST00000477489 PKD2Q13563 968 aa9.47□□□□□ -0.89
LDB3-206ENST00000477489 TET3O43151 1660 aa9.47□□□□□ -0.89
LDB3-206ENST00000477489 KIDINS220Q9ULH0 1771 aa9.47□□□□□ -0.89
LDB3-206ENST00000477489 RNF17Q9BXT8 1623 aaKnown RBP9.46□□□□□ -0.89
LDB3-206ENST00000477489 DHX29Q7Z478 1369 aaKnown RBP9.46□□□□□ -0.9
LDB3-206ENST00000477489 PTPRMP28827 1452 aa9.46□□□□□ -0.9
LDB3-206ENST00000477489 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 CERKQ8TCT0 537 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 KANK1Q14678 1352 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 LMTK2Q8IWU2 1503 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 ADAMTSL3P82987 1691 aa9.45□□□□□ -0.9
LDB3-206ENST00000477489 C7P10643 843 aa9.44□□□□□ -0.9
LDB3-206ENST00000477489 IFNLR1Q8IU57 520 aaPredicted RBP9.44□□□□□ -0.9
LDB3-206ENST00000477489 L3MBTL2Q969R5 705 aa9.44□□□□□ -0.9
LDB3-206ENST00000477489 CCDC144AA2RUR9 1427 aa9.44□□□□□ -0.9
LDB3-206ENST00000477489 POLR1AO95602 1720 aaPredicted RBP9.43□□□□□ -0.9
LDB3-206ENST00000477489 PYGBP11216 843 aa9.43□□□□□ -0.9
LDB3-206ENST00000477489 RICTORQ6R327 1708 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 TRPM2O94759 1503 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 ZMYM4Q5VZL5 1548 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 A2MP01023 1474 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 GSE1Q14687 1217 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 AFAP1Q8N556 730 aa9.42□□□□□ -0.9
LDB3-206ENST00000477489 RALGAPBQ86X10 1494 aa9.41□□□□□ -0.9
LDB3-206ENST00000477489 PTPRTO14522 1441 aa9.41□□□□□ -0.9
LDB3-206ENST00000477489 SPHKAPQ2M3C7 1700 aa9.41□□□□□ -0.9
LDB3-206ENST00000477489 E9PCH4 1651 aa9.41□□□□□ -0.9
LDB3-206ENST00000477489 LAMC1P11047 1609 aa9.41□□□□□ -0.9
LDB3-206ENST00000477489 MROH1Q8NDA8 1641 aa9.41□□□□□ -0.9
LDB3-206ENST00000477489 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
LDB3-206ENST00000477489 CEP152O94986 1710 aa9.4□□□□□ -0.9
LDB3-206ENST00000477489 ZC3H13Q5T200 1668 aaKnown RBP9.4□□□□□ -0.9
LDB3-206ENST00000477489 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.9
LDB3-206ENST00000477489 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
LDB3-206ENST00000477489 EFCAB6Q5THR3 1501 aa9.39□□□□□ -0.91
LDB3-206ENST00000477489 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
LDB3-206ENST00000477489 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
LDB3-206ENST00000477489 MADDQ8WXG6 1647 aa9.38□□□□□ -0.91
LDB3-206ENST00000477489 ARID4BQ4LE39 1312 aaPredicted RBP9.38□□□□□ -0.91
LDB3-206ENST00000477489 SPATA31E1Q6ZUB1 1445 aa9.38□□□□□ -0.91
LDB3-206ENST00000477489 FRMPD1Q5SYB0 1578 aa9.37□□□□□ -0.91
LDB3-206ENST00000477489 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
LDB3-206ENST00000477489 HSPA2P54652 639 aa9.37□□□□□ -0.91
LDB3-206ENST00000477489 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
LDB3-206ENST00000477489 TMEM106CQ9BVX2 250 aa9.36□□□□□ -0.91
LDB3-206ENST00000477489 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
LDB3-206ENST00000477489 TRPM1Q7Z4N2 1603 aa9.35□□□□□ -0.91
LDB3-206ENST00000477489 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
LDB3-206ENST00000477489 RIMS1Q86UR5 1692 aaKnown RBP9.35□□□□□ -0.91
LDB3-206ENST00000477489 AGLP35573 1532 aa9.35□□□□□ -0.91
LDB3-206ENST00000477489 GPRASP1Q5JY77 1395 aa9.35□□□□□ -0.91
LDB3-206ENST00000477489 KIAA1210Q9ULL0 1709 aa9.34□□□□□ -0.91
LDB3-206ENST00000477489 ARHGAP31Q2M1Z3 1444 aa9.34□□□□□ -0.91
LDB3-206ENST00000477489 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
LDB3-206ENST00000477489 KIF1BO60333 1816 aa9.34□□□□□ -0.91
LDB3-206ENST00000477489 POTEFA5A3E0 1075 aa9.34□□□□□ -0.91
LDB3-206ENST00000477489 KIF3BO15066 747 aa9.34□□□□□ -0.91
LDB3-206ENST00000477489 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
LDB3-206ENST00000477489 CNTLNQ9NXG0 1405 aa9.33□□□□□ -0.92
LDB3-206ENST00000477489 CENPBP07199 599 aaPredicted RBP9.33□□□□□ -0.92
LDB3-206ENST00000477489 HSPA5P11021 654 aaKnown RBP9.33□□□□□ -0.92
LDB3-206ENST00000477489 NBPF8Q3BBV2 869 aa9.33□□□□□ -0.92
LDB3-206ENST00000477489 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
LDB3-206ENST00000477489 ABCC3O15438 1527 aa9.32□□□□□ -0.92
LDB3-206ENST00000477489 CLTCL1P53675 1640 aa9.32□□□□□ -0.92
LDB3-206ENST00000477489 CAMSAP1Q5T5Y3 1602 aa9.32□□□□□ -0.92
LDB3-206ENST00000477489 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
LDB3-206ENST00000477489 IER5LQ5T953 404 aa9.32□□□□□ -0.92
LDB3-206ENST00000477489 ROCK2O75116 1388 aaKnown RBP9.32□□□□□ -0.92
LDB3-206ENST00000477489 MYOM2P54296 1465 aa9.32□□□□□ -0.92
LDB3-206ENST00000477489 ZNF467Q7Z7K2 595 aaPredicted RBP9.31□□□□□ -0.92
LDB3-206ENST00000477489 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms