RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 UHRF1BP1Q6BDS2 1440 aa20.12■□□□□ 0.81
CLSTN1-205ENST00000477264 KIF3BO15066 747 aa20.11■□□□□ 0.81
CLSTN1-205ENST00000477264 RALBP1Q15311 655 aa20.11■□□□□ 0.81
CLSTN1-205ENST00000477264 A2MP01023 1474 aa20.11■□□□□ 0.81
CLSTN1-205ENST00000477264 DEPDC5O75140 1603 aa20.1■□□□□ 0.81
CLSTN1-205ENST00000477264 KANK1Q14678 1352 aa20.09■□□□□ 0.81
CLSTN1-205ENST00000477264 ABCA6Q8N139 1617 aa20.09■□□□□ 0.81
CLSTN1-205ENST00000477264 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.08■□□□□ 0.8
CLSTN1-205ENST00000477264 FRMPD1Q5SYB0 1578 aa20.07■□□□□ 0.8
CLSTN1-205ENST00000477264 DIP2CQ9Y2E4 1556 aa20.04■□□□□ 0.8
CLSTN1-205ENST00000477264 NFKBIBQ15653 356 aa20.04■□□□□ 0.8
CLSTN1-205ENST00000477264 VIRMAQ69YN4 1812 aaKnown RBP20.04■□□□□ 0.8
CLSTN1-205ENST00000477264 BRPF3Q9ULD4 1205 aa20.04■□□□□ 0.8
CLSTN1-205ENST00000477264 PRDM15P57071 1507 aaPredicted RBP20.04■□□□□ 0.8
CLSTN1-205ENST00000477264 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
CLSTN1-205ENST00000477264 RNF17Q9BXT8 1623 aaKnown RBP20.01■□□□□ 0.79
CLSTN1-205ENST00000477264 DAXXQ9UER7 740 aaPredicted RBP20.01■□□□□ 0.79
CLSTN1-205ENST00000477264 YEATS2Q9ULM3 1422 aa20■□□□□ 0.79
CLSTN1-205ENST00000477264 FAM43AQ8N2R8 423 aa20■□□□□ 0.79
CLSTN1-205ENST00000477264 TET3O43151 1660 aa20■□□□□ 0.79
CLSTN1-205ENST00000477264 MROH1Q8NDA8 1641 aa20■□□□□ 0.79
CLSTN1-205ENST00000477264 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
CLSTN1-205ENST00000477264 BLMP54132 1417 aaPredicted RBP19.98■□□□□ 0.79
CLSTN1-205ENST00000477264 CCDC144AA2RUR9 1427 aa19.98■□□□□ 0.79
CLSTN1-205ENST00000477264 TRHP20396 242 aaPredicted RBP19.98■□□□□ 0.79
CLSTN1-205ENST00000477264 NLRP13Q86W25 1043 aa19.98■□□□□ 0.79
CLSTN1-205ENST00000477264 PARD3Q8TEW0 1356 aa19.98■□□□□ 0.79
CLSTN1-205ENST00000477264 GGT6Q6P531 493 aa19.97■□□□□ 0.79
CLSTN1-205ENST00000477264 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
CLSTN1-205ENST00000477264 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
CLSTN1-205ENST00000477264 ATP10AO60312 1499 aa19.94■□□□□ 0.78
CLSTN1-205ENST00000477264 CEP152O94986 1710 aa19.93■□□□□ 0.78
CLSTN1-205ENST00000477264 COL17A1Q9UMD9 1497 aaPredicted RBP19.93■□□□□ 0.78
CLSTN1-205ENST00000477264 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
CLSTN1-205ENST00000477264 SPHKAPQ2M3C7 1700 aa19.91■□□□□ 0.78
CLSTN1-205ENST00000477264 CENPQQ7L2Z9 268 aaPredicted RBP19.91■□□□□ 0.78
CLSTN1-205ENST00000477264 LMTK2Q8IWU2 1503 aa19.91■□□□□ 0.78
CLSTN1-205ENST00000477264 KDM2BQ8NHM5 1336 aa19.91■□□□□ 0.78
CLSTN1-205ENST00000477264 LAMC1P11047 1609 aa19.91■□□□□ 0.78
CLSTN1-205ENST00000477264 EFCAB6Q5THR3 1501 aa19.9■□□□□ 0.78
CLSTN1-205ENST00000477264 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
CLSTN1-205ENST00000477264 REREQ9P2R6 1566 aa19.89■□□□□ 0.78
CLSTN1-205ENST00000477264 TRPM2O94759 1503 aa19.88■□□□□ 0.77
CLSTN1-205ENST00000477264 CRBNQ96SW2 442 aa19.88■□□□□ 0.77
CLSTN1-205ENST00000477264 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
CLSTN1-205ENST00000477264 CARD11Q9BXL7 1154 aa19.87■□□□□ 0.77
CLSTN1-205ENST00000477264 ARHGEF40Q8TER5 1519 aa19.87■□□□□ 0.77
CLSTN1-205ENST00000477264 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
CLSTN1-205ENST00000477264 PTPRTO14522 1441 aa19.86■□□□□ 0.77
CLSTN1-205ENST00000477264 EIF5BO60841 1220 aaKnown RBP19.86■□□□□ 0.77
CLSTN1-205ENST00000477264 ABCC3O15438 1527 aa19.86■□□□□ 0.77
CLSTN1-205ENST00000477264 ZC3H13Q5T200 1668 aaKnown RBP19.86■□□□□ 0.77
CLSTN1-205ENST00000477264 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
CLSTN1-205ENST00000477264 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
CLSTN1-205ENST00000477264 AGLP35573 1532 aa19.83■□□□□ 0.77
CLSTN1-205ENST00000477264 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.77
CLSTN1-205ENST00000477264 RGL3Q3MIN7 710 aa19.83■□□□□ 0.76
CLSTN1-205ENST00000477264 DCAF11Q8TEB1 546 aa19.83■□□□□ 0.76
CLSTN1-205ENST00000477264 C8orf34Q49A92 452 aa19.81■□□□□ 0.76
CLSTN1-205ENST00000477264 CLTCL1P53675 1640 aa19.81■□□□□ 0.76
CLSTN1-205ENST00000477264 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
CLSTN1-205ENST00000477264 NPATQ14207 1427 aa19.8■□□□□ 0.76
CLSTN1-205ENST00000477264 CFAP65Q6ZU64 1925 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-205ENST00000477264 EIF3AQ14152 1382 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-205ENST00000477264 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
CLSTN1-205ENST00000477264 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
CLSTN1-205ENST00000477264 L1TD1Q5T7N2 865 aaKnown RBP19.78■□□□□ 0.76
CLSTN1-205ENST00000477264 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.78■□□□□ 0.76
CLSTN1-205ENST00000477264 CDCA7LQ96GN5 454 aa19.78■□□□□ 0.76
CLSTN1-205ENST00000477264 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
CLSTN1-205ENST00000477264 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.75
CLSTN1-205ENST00000477264 KIF1BO60333 1816 aa19.76■□□□□ 0.75
CLSTN1-205ENST00000477264 PLIN1O60240 522 aa19.76■□□□□ 0.75
CLSTN1-205ENST00000477264 GLIPR1L2Q4G1C9 344 aa19.76■□□□□ 0.75
CLSTN1-205ENST00000477264 SIGLEC1Q9BZZ2 1709 aa19.75■□□□□ 0.75
CLSTN1-205ENST00000477264 ARHGAP31Q2M1Z3 1444 aa19.75■□□□□ 0.75
CLSTN1-205ENST00000477264 SLC4A3P48751 1232 aa19.74■□□□□ 0.75
CLSTN1-205ENST00000477264 MLECQ14165 292 aa19.73■□□□□ 0.75
CLSTN1-205ENST00000477264 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
CLSTN1-205ENST00000477264 GPRASP1Q5JY77 1395 aa19.72■□□□□ 0.75
CLSTN1-205ENST00000477264 NEURL4Q96JN8 1562 aa19.72■□□□□ 0.75
CLSTN1-205ENST00000477264 PER1O15534 1290 aaPredicted RBP19.71■□□□□ 0.75
CLSTN1-205ENST00000477264 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
CLSTN1-205ENST00000477264 CLTCQ00610 1675 aaKnown RBP19.7■□□□□ 0.74
CLSTN1-205ENST00000477264 PRAG1Q86YV5 1406 aa19.7■□□□□ 0.74
CLSTN1-205ENST00000477264 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
CLSTN1-205ENST00000477264 NOS1P29475 1434 aa19.7■□□□□ 0.74
CLSTN1-205ENST00000477264 BECN1Q14457 450 aa19.68■□□□□ 0.74
CLSTN1-205ENST00000477264 SKAP1Q86WV1 359 aa19.68■□□□□ 0.74
CLSTN1-205ENST00000477264 PREX1Q8TCU6 1659 aa19.67■□□□□ 0.74
CLSTN1-205ENST00000477264 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
CLSTN1-205ENST00000477264 SYNMO15061 1565 aa19.66■□□□□ 0.74
CLSTN1-205ENST00000477264 C20orf194Q5TEA3 1177 aa19.66■□□□□ 0.74
CLSTN1-205ENST00000477264 ZMYM3Q14202 1370 aa19.65■□□□□ 0.74
CLSTN1-205ENST00000477264 MROH2AA6NES4 1674 aa19.64■□□□□ 0.73
CLSTN1-205ENST00000477264 PIK3C2BO00750 1634 aa19.64■□□□□ 0.73
CLSTN1-205ENST00000477264 NINLQ9Y2I6 1382 aa19.64■□□□□ 0.73
CLSTN1-205ENST00000477264 ADGRB3O60242 1522 aa19.63■□□□□ 0.73
CLSTN1-205ENST00000477264 DUSP27Q5VZP5 1158 aa19.63■□□□□ 0.73
CLSTN1-205ENST00000477264 SLC52A1Q9NWF4 448 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms