RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
SHQ1-207ENST00000475558 ITGAEP38570 1179 aa10.36□□□□□ -0.75
SHQ1-207ENST00000475558 SYNMO15061 1565 aa10.35□□□□□ -0.75
SHQ1-207ENST00000475558 STRCP1A6NGW2 1772 aa10.35□□□□□ -0.75
SHQ1-207ENST00000475558 RNF17Q9BXT8 1623 aaKnown RBP10.35□□□□□ -0.75
SHQ1-207ENST00000475558 ERVK-7P63135 1459 aa10.35□□□□□ -0.75
SHQ1-207ENST00000475558 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
SHQ1-207ENST00000475558 CLSPNQ9HAW4 1339 aa10.34□□□□□ -0.75
SHQ1-207ENST00000475558 ABCC3O15438 1527 aa10.34□□□□□ -0.75
SHQ1-207ENST00000475558 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
SHQ1-207ENST00000475558 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
SHQ1-207ENST00000475558 ROCK1Q13464 1354 aa10.34□□□□□ -0.75
SHQ1-207ENST00000475558 CFAP65Q6ZU64 1925 aaKnown RBP10.34□□□□□ -0.75
SHQ1-207ENST00000475558 EID1Q9Y6B2 187 aa10.33□□□□□ -0.76
SHQ1-207ENST00000475558 SCAF11Q99590 1463 aaKnown RBP10.33□□□□□ -0.76
SHQ1-207ENST00000475558 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
SHQ1-207ENST00000475558 MAST1Q9Y2H9 1570 aa10.32□□□□□ -0.76
SHQ1-207ENST00000475558 LTKP29376 864 aa10.32□□□□□ -0.76
SHQ1-207ENST00000475558 CCER1Q8TC90 406 aaPredicted RBP10.32□□□□□ -0.76
SHQ1-207ENST00000475558 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
SHQ1-207ENST00000475558 RGS17Q9UGC6 210 aaPredicted RBP10.32□□□□□ -0.76
SHQ1-207ENST00000475558 EIF2AK4Q9P2K8 1649 aaKnown RBP10.32□□□□□ -0.76
SHQ1-207ENST00000475558 UBR1Q8IWV7 1749 aa10.31□□□□□ -0.76
SHQ1-207ENST00000475558 PRKAR2AP13861 404 aaKnown RBP10.31□□□□□ -0.76
SHQ1-207ENST00000475558 ARHGAP23Q9P227 1491 aa10.3□□□□□ -0.76
SHQ1-207ENST00000475558 ANKRD30AQ9BXX3 1397 aa10.3□□□□□ -0.76
SHQ1-207ENST00000475558 SLIT1O75093 1534 aa10.3□□□□□ -0.76
SHQ1-207ENST00000475558 ARHGAP31Q2M1Z3 1444 aa10.3□□□□□ -0.76
SHQ1-207ENST00000475558 FAM135BQ49AJ0 1406 aa10.3□□□□□ -0.76
SHQ1-207ENST00000475558 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
SHQ1-207ENST00000475558 MROH1Q8NDA8 1641 aa10.29□□□□□ -0.76
SHQ1-207ENST00000475558 DUOX2Q9NRD8 1548 aa10.28□□□□□ -0.76
SHQ1-207ENST00000475558 CEP152O94986 1710 aa10.28□□□□□ -0.76
SHQ1-207ENST00000475558 ABCC5O15440 1437 aa10.28□□□□□ -0.76
SHQ1-207ENST00000475558 EVX2Q03828 476 aa10.28□□□□□ -0.76
SHQ1-207ENST00000475558 MKRN4PQ13434 485 aaPredicted RBP10.28□□□□□ -0.76
SHQ1-207ENST00000475558 PTPN23Q9H3S7 1636 aa10.28□□□□□ -0.76
SHQ1-207ENST00000475558 KCNA6P17658 529 aa10.27□□□□□ -0.77
SHQ1-207ENST00000475558 CHIC2Q9UKJ5 165 aa10.27□□□□□ -0.77
SHQ1-207ENST00000475558 XIRP1Q702N8 1843 aaKnown RBP10.27□□□□□ -0.77
SHQ1-207ENST00000475558 TMEM2Q9UHN6 1383 aa10.26□□□□□ -0.77
SHQ1-207ENST00000475558 HFM1A2PYH4 1435 aa10.26□□□□□ -0.77
SHQ1-207ENST00000475558 DAPK1P53355 1430 aa10.26□□□□□ -0.77
SHQ1-207ENST00000475558 POTEAQ6S8J7 498 aa10.26□□□□□ -0.77
SHQ1-207ENST00000475558 TMEM94Q12767 1356 aa10.26□□□□□ -0.77
SHQ1-207ENST00000475558 KANK1Q14678 1352 aa10.26□□□□□ -0.77
SHQ1-207ENST00000475558 PROSER2Q86WR7 435 aaPredicted RBP10.25□□□□□ -0.77
SHQ1-207ENST00000475558 RRP7BPQ9NSQ0 103 aa10.25□□□□□ -0.77
SHQ1-207ENST00000475558 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
SHQ1-207ENST00000475558 KIF15Q9NS87 1388 aa10.25□□□□□ -0.77
SHQ1-207ENST00000475558 ERBINQ96RT1 1412 aa10.24□□□□□ -0.77
SHQ1-207ENST00000475558 PRDM15P57071 1507 aaPredicted RBP10.24□□□□□ -0.77
SHQ1-207ENST00000475558 IDI1Q13907 227 aa10.24□□□□□ -0.77
SHQ1-207ENST00000475558 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
SHQ1-207ENST00000475558 RAB3GAP2Q9H2M9 1393 aa10.24□□□□□ -0.77
SHQ1-207ENST00000475558 PIK3C2BO00750 1634 aa10.23□□□□□ -0.77
SHQ1-207ENST00000475558 SLC26A8Q96RN1 970 aa10.23□□□□□ -0.77
SHQ1-207ENST00000475558 EFCAB6Q5THR3 1501 aa10.23□□□□□ -0.77
SHQ1-207ENST00000475558 KDM5AP29375 1690 aaKnown RBP10.22□□□□□ -0.77
SHQ1-207ENST00000475558 NAIPQ13075 1403 aa10.22□□□□□ -0.77
SHQ1-207ENST00000475558 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
SHQ1-207ENST00000475558 BCANQ96GW7 911 aa10.21□□□□□ -0.77
SHQ1-207ENST00000475558 SLAIN2Q9P270 581 aa10.21□□□□□ -0.77
SHQ1-207ENST00000475558 MSH6P52701 1360 aa10.21□□□□□ -0.78
SHQ1-207ENST00000475558 ADGRL2O95490 1459 aa10.21□□□□□ -0.78
SHQ1-207ENST00000475558 TET3O43151 1660 aa10.21□□□□□ -0.78
SHQ1-207ENST00000475558 ROBO1Q9Y6N7 1651 aa10.21□□□□□ -0.78
SHQ1-207ENST00000475558 RBM33Q96EV2 1170 aaKnown RBP10.2□□□□□ -0.78
SHQ1-207ENST00000475558 SLC52A1Q9NWF4 448 aa10.2□□□□□ -0.78
SHQ1-207ENST00000475558 LMTK2Q8IWU2 1503 aa10.19□□□□□ -0.78
SHQ1-207ENST00000475558 NKTRP30414 1462 aaKnown RBP10.19□□□□□ -0.78
SHQ1-207ENST00000475558 JCADQ9P266 1359 aa10.19□□□□□ -0.78
SHQ1-207ENST00000475558 HDGFP51858 240 aaKnown RBP10.19□□□□□ -0.78
SHQ1-207ENST00000475558 ANKRD50Q9ULJ7 1429 aa10.18□□□□□ -0.78
SHQ1-207ENST00000475558 NOS1P29475 1434 aa10.17□□□□□ -0.78
SHQ1-207ENST00000475558 MPHOSPH9Q99550 1183 aa10.17□□□□□ -0.78
SHQ1-207ENST00000475558 CROCC2H7BZ55 1655 aa10.17□□□□□ -0.78
SHQ1-207ENST00000475558 NWD1Q149M9 1564 aa10.17□□□□□ -0.78
SHQ1-207ENST00000475558 PHLPP1O60346 1717 aa10.16□□□□□ -0.78
SHQ1-207ENST00000475558 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
SHQ1-207ENST00000475558 ADGRB3O60242 1522 aa10.16□□□□□ -0.78
SHQ1-207ENST00000475558 NCOA3Q9Y6Q9 1424 aa10.16□□□□□ -0.78
SHQ1-207ENST00000475558 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.78
SHQ1-207ENST00000475558 SPATA31A6Q5VVP1 1343 aa10.15□□□□□ -0.78
SHQ1-207ENST00000475558 PPP1R15AO75807 674 aaPredicted RBP10.15□□□□□ -0.78
SHQ1-207ENST00000475558 PRR29P0C7W0 189 aa10.15□□□□□ -0.78
SHQ1-207ENST00000475558 ZNF772Q68DY9 489 aaPredicted RBP10.15□□□□□ -0.78
SHQ1-207ENST00000475558 CHADLQ6NUI6 762 aa10.15□□□□□ -0.78
SHQ1-207ENST00000475558 TBX22Q9Y458 520 aa10.15□□□□□ -0.78
SHQ1-207ENST00000475558 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
SHQ1-207ENST00000475558 MEX3CQ5U5Q3 659 aaKnown RBP10.14□□□□□ -0.79
SHQ1-207ENST00000475558 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
SHQ1-207ENST00000475558 CHD2O14647 1828 aaKnown RBP10.14□□□□□ -0.79
SHQ1-207ENST00000475558 RPRD2Q5VT52 1461 aaKnown RBP10.13□□□□□ -0.79
SHQ1-207ENST00000475558 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
SHQ1-207ENST00000475558 CADPS2Q86UW7 1296 aa10.13□□□□□ -0.79
SHQ1-207ENST00000475558 NUP155O75694 1391 aa10.13□□□□□ -0.79
SHQ1-207ENST00000475558 ATF3P18847 181 aa10.12□□□□□ -0.79
SHQ1-207ENST00000475558 UPF1Q92900 1129 aaKnown RBP eCLIP10.12□□□□□ -0.79
SHQ1-207ENST00000475558 C19orf44Q9H6X5 657 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms