RNA–Protein interactions for RNA: ENST00000475460.6

COMMD3-BMI1-203, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-203ENST00000475460 IQSEC2Q5JU85 1478 aa12□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 ATP7AQ04656 1500 aa12□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 PTPRKQ15262 1439 aa11.99□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 PLA2R1Q13018 1463 aa11.96□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 KIF3BO15066 747 aa11.96□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
COMMD3-BMI1-203ENST00000475460 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 MROH2AA6NES4 1674 aa11.95□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 PLXNC1O60486 1568 aa11.95□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 FBXO31Q5XUX0 539 aaPredicted RBP11.94□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 TCOF1Q13428 1488 aaKnown RBP11.94□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 MBD5Q9P267 1494 aa11.94□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 CEP170BQ9Y4F5 1589 aaPredicted RBP11.93□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 CLTCQ00610 1675 aaKnown RBP11.93□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 A2ML1A8K2U0 1454 aa11.92□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 ANKLE2Q86XL3 938 aa11.92□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 TNRQ92752 1358 aa11.92□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 TOM1O60784 492 aa11.91□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 MYO3AQ8NEV4 1616 aa11.9□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
COMMD3-BMI1-203ENST00000475460 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 CCDC141Q6ZP82 1450 aa11.88□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 MIA2Q96PC5 1412 aa11.87□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 HSPA1LP34931 641 aa11.87□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 ZNF142P52746 1687 aaPredicted RBP11.87□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 MFRPQ9BY79 579 aa11.86□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 PZPP20742 1482 aa11.86□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 CAMSAP2Q08AD1 1489 aa11.85□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 EFCAB3Q8N7B9 438 aa11.85□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 KDM5DQ9BY66 1539 aa11.85□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 CPS1P31327 1500 aa11.84□□□□□ -0.51
COMMD3-BMI1-203ENST00000475460 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 TIE1P35590 1138 aa11.82□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 NPHP4O75161 1426 aaPredicted RBP11.82□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 GABBR2O75899 941 aa11.81□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 UGGT1Q9NYU2 1555 aa11.8□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 NEURL4Q96JN8 1562 aa11.79□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 FBXO22Q8NEZ5 403 aa11.79□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 BMP2KQ9NSY1 1161 aaPredicted RBP11.79□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 MED14O60244 1454 aa11.78□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 LRRC9Q6ZRR7 1453 aa11.77□□□□□ -0.52
COMMD3-BMI1-203ENST00000475460 ARHGEF5Q12774 1597 aa11.77□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 LOC105371045A0A1W2PR82 267 aa11.77□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 VPS8Q8N3P4 1428 aa11.76□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 ABCC3O15438 1527 aa11.76□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 PPP1R37O75864 691 aa11.75□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 RRP7BPQ9NSQ0 103 aa11.75□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 EID1Q9Y6B2 187 aa11.75□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 LTKP29376 864 aa11.74□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 MYOM3Q5VTT5 1437 aa11.74□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 ERVK-7P63135 1459 aa11.74□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 POLR1AO95602 1720 aaPredicted RBP11.74□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 SOX12O15370 315 aa11.73□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 DEPDC5O75140 1603 aa11.73□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 MED1Q15648 1581 aaPredicted RBP11.73□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 LRRC7Q96NW7 1537 aa11.72□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 KIF15Q9NS87 1388 aa11.72□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 SCAF11Q99590 1463 aaKnown RBP11.71□□□□□ -0.53
COMMD3-BMI1-203ENST00000475460 RNF17Q9BXT8 1623 aaKnown RBP11.71□□□□□ -0.54
COMMD3-BMI1-203ENST00000475460 MAST1Q9Y2H9 1570 aa11.71□□□□□ -0.54
COMMD3-BMI1-203ENST00000475460 NLRP6P59044 892 aa11.7□□□□□ -0.54
COMMD3-BMI1-203ENST00000475460 CADPS2Q86UW7 1296 aa11.7□□□□□ -0.54
COMMD3-BMI1-203ENST00000475460 IQGAP1P46940 1657 aa11.7□□□□□ -0.54
COMMD3-BMI1-203ENST00000475460 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms