RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
PHTF1-209ENST00000474926 SLC52A1Q9NWF4 448 aa9.56□□□□□ -0.88
PHTF1-209ENST00000474926 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
PHTF1-209ENST00000474926 CEP170Q5SW79 1584 aa9.55□□□□□ -0.88
PHTF1-209ENST00000474926 E9PSI1 815 aa9.55□□□□□ -0.88
PHTF1-209ENST00000474926 COG3Q96JB2 828 aa9.55□□□□□ -0.88
PHTF1-209ENST00000474926 NOP58Q9Y2X3 529 aaKnown RBP9.55□□□□□ -0.88
PHTF1-209ENST00000474926 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
PHTF1-209ENST00000474926 AMPHP49418 695 aa9.54□□□□□ -0.88
PHTF1-209ENST00000474926 TXNDC2Q86VQ3 553 aa9.54□□□□□ -0.88
PHTF1-209ENST00000474926 ARXQ96QS3 562 aa9.54□□□□□ -0.88
PHTF1-209ENST00000474926 IPO8O15397 1037 aaKnown RBP9.54□□□□□ -0.88
PHTF1-209ENST00000474926 DIAPH1O60610 1272 aaKnown RBP9.54□□□□□ -0.88
PHTF1-209ENST00000474926 IDI1Q13907 227 aa9.54□□□□□ -0.88
PHTF1-209ENST00000474926 ASXL2Q76L83 1435 aa9.54□□□□□ -0.88
PHTF1-209ENST00000474926 TCERG1O14776 1098 aaKnown RBP9.53□□□□□ -0.88
PHTF1-209ENST00000474926 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.53□□□□□ -0.88
PHTF1-209ENST00000474926 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
PHTF1-209ENST00000474926 DHX29Q7Z478 1369 aaKnown RBP9.53□□□□□ -0.88
PHTF1-209ENST00000474926 APBB1O00213 710 aa9.53□□□□□ -0.88
PHTF1-209ENST00000474926 BECN1Q14457 450 aa9.52□□□□□ -0.88
PHTF1-209ENST00000474926 HMOX1P09601 288 aa9.52□□□□□ -0.89
PHTF1-209ENST00000474926 RUNDC1Q96C34 613 aa9.52□□□□□ -0.89
PHTF1-209ENST00000474926 CABP1Q9NZU7 370 aa9.52□□□□□ -0.89
PHTF1-209ENST00000474926 RIPK4P57078 832 aa9.52□□□□□ -0.89
PHTF1-209ENST00000474926 CALD1Q05682 793 aaKnown RBP9.52□□□□□ -0.89
PHTF1-209ENST00000474926 TCP11L2Q8N4U5 519 aa9.52□□□□□ -0.89
PHTF1-209ENST00000474926 PZPP20742 1482 aa9.51□□□□□ -0.89
PHTF1-209ENST00000474926 ITSN2Q9NZM3 1697 aa9.51□□□□□ -0.89
PHTF1-209ENST00000474926 CDK19Q9BWU1 502 aa9.51□□□□□ -0.89
PHTF1-209ENST00000474926 RWDD1Q9H446 243 aaPredicted RBP9.51□□□□□ -0.89
PHTF1-209ENST00000474926 CHMP4BQ9H444 224 aaKnown RBP9.5□□□□□ -0.89
PHTF1-209ENST00000474926 DISP3Q9P2K9 1392 aa9.5□□□□□ -0.89
PHTF1-209ENST00000474926 SLC26A8Q96RN1 970 aa9.5□□□□□ -0.89
PHTF1-209ENST00000474926 RPGRIP1LQ68CZ1 1315 aa9.5□□□□□ -0.89
PHTF1-209ENST00000474926 WAPLQ7Z5K2 1190 aa9.49□□□□□ -0.89
PHTF1-209ENST00000474926 FAM135AQ9P2D6 1515 aa9.49□□□□□ -0.89
PHTF1-209ENST00000474926 NUTM2GQ5VZR2 741 aa9.49□□□□□ -0.89
PHTF1-209ENST00000474926 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
PHTF1-209ENST00000474926 WDR7Q9Y4E6 1490 aa9.48□□□□□ -0.89
PHTF1-209ENST00000474926 CSB-PGBD3P0DP91 1061 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 NOS1P29475 1434 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 DENND4BO75064 1496 aaPredicted RBP9.47□□□□□ -0.89
PHTF1-209ENST00000474926 SLC4A10Q6U841 1118 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 PMFBP1Q8TBY8 1022 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 ABCC2Q92887 1545 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 PANK1Q8TE04 598 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 ZKSCAN2Q63HK3 967 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
PHTF1-209ENST00000474926 DUOX2Q9NRD8 1548 aa9.46□□□□□ -0.89
PHTF1-209ENST00000474926 PDE4AP27815 886 aa9.46□□□□□ -0.89
PHTF1-209ENST00000474926 CEBPAP49715 358 aaPredicted RBP9.46□□□□□ -0.9
PHTF1-209ENST00000474926 CENPQQ7L2Z9 268 aaPredicted RBP9.46□□□□□ -0.9
PHTF1-209ENST00000474926 NGEFQ8N5V2 710 aa9.46□□□□□ -0.9
PHTF1-209ENST00000474926 PRAG1Q86YV5 1406 aa9.46□□□□□ -0.9
PHTF1-209ENST00000474926 BCAR3O75815 825 aa9.45□□□□□ -0.9
PHTF1-209ENST00000474926 OS9Q13438 667 aaPredicted RBP9.45□□□□□ -0.9
PHTF1-209ENST00000474926 NSD3Q9BZ95 1437 aa9.45□□□□□ -0.9
PHTF1-209ENST00000474926 TESK2Q96S53 571 aa9.45□□□□□ -0.9
PHTF1-209ENST00000474926 SHANK2Q9UPX8 1470 aa9.45□□□□□ -0.9
PHTF1-209ENST00000474926 STK31Q9BXU1 1019 aa9.45□□□□□ -0.9
PHTF1-209ENST00000474926 C14orf93Q9H972 538 aaKnown RBP9.45□□□□□ -0.9
PHTF1-209ENST00000474926 RALGAPBQ86X10 1494 aa9.44□□□□□ -0.9
PHTF1-209ENST00000474926 PRKAR2BP31323 418 aa9.44□□□□□ -0.9
PHTF1-209ENST00000474926 KDM6BO15054 1643 aa9.44□□□□□ -0.9
PHTF1-209ENST00000474926 TSR2Q969E8 191 aaKnown RBP9.44□□□□□ -0.9
PHTF1-209ENST00000474926 ADGRL2O95490 1459 aa9.44□□□□□ -0.9
PHTF1-209ENST00000474926 SMG6Q86US8 1419 aaKnown RBP9.43□□□□□ -0.9
PHTF1-209ENST00000474926 A2MP01023 1474 aa9.43□□□□□ -0.9
PHTF1-209ENST00000474926 SCAF11Q99590 1463 aaKnown RBP9.43□□□□□ -0.9
PHTF1-209ENST00000474926 NLRP6P59044 892 aa9.43□□□□□ -0.9
PHTF1-209ENST00000474926 PSME1Q06323 249 aa9.43□□□□□ -0.9
PHTF1-209ENST00000474926 CASC1Q6TDU7 716 aa9.43□□□□□ -0.9
PHTF1-209ENST00000474926 IPO9Q96P70 1041 aaKnown RBP9.43□□□□□ -0.9
PHTF1-209ENST00000474926 DZIP1LQ8IYY4 767 aaKnown RBP9.43□□□□□ -0.9
PHTF1-209ENST00000474926 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
PHTF1-209ENST00000474926 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
PHTF1-209ENST00000474926 ABCC10Q5T3U5 1492 aa9.42□□□□□ -0.9
PHTF1-209ENST00000474926 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
PHTF1-209ENST00000474926 MFAP1P55081 439 aaKnown RBP9.42□□□□□ -0.9
PHTF1-209ENST00000474926 RRS1Q15050 365 aaKnown RBP9.42□□□□□ -0.9
PHTF1-209ENST00000474926 TEX14Q8IWB6 1497 aa9.42□□□□□ -0.9
PHTF1-209ENST00000474926 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
PHTF1-209ENST00000474926 THEMISQ8N1K5 641 aaPredicted RBP9.41□□□□□ -0.9
PHTF1-209ENST00000474926 MBD5Q9P267 1494 aa9.41□□□□□ -0.9
PHTF1-209ENST00000474926 ZNF518AQ6AHZ1 1483 aa9.41□□□□□ -0.9
PHTF1-209ENST00000474926 ABCA8O94911 1581 aa9.41□□□□□ -0.9
PHTF1-209ENST00000474926 NUDT16Q96DE0 195 aaKnown RBP9.4□□□□□ -0.9
PHTF1-209ENST00000474926 SLKQ9H2G2 1235 aaPredicted RBP9.4□□□□□ -0.9
PHTF1-209ENST00000474926 AMER1Q5JTC6 1135 aaPredicted RBP9.4□□□□□ -0.9
PHTF1-209ENST00000474926 ATAD2Q6PL18 1390 aa9.4□□□□□ -0.9
PHTF1-209ENST00000474926 HSP90AB1P08238 724 aaKnown RBP9.4□□□□□ -0.91
PHTF1-209ENST00000474926 WWC1Q8IX03 1113 aa9.4□□□□□ -0.91
PHTF1-209ENST00000474926 CCDC61Q9Y6R9 512 aa9.4□□□□□ -0.91
PHTF1-209ENST00000474926 FBLN1P23142 703 aa9.39□□□□□ -0.91
PHTF1-209ENST00000474926 ZNF330Q9Y3S2 320 aaPredicted RBP9.39□□□□□ -0.91
PHTF1-209ENST00000474926 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
PHTF1-209ENST00000474926 ANKRD45Q5TZF3 282 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms