RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 FRAT2O75474 233 aaPredicted RBP5.79□□□□□ -1.48
CCNL1-215ENST00000474539 RBM33Q96EV2 1170 aaKnown RBP5.79□□□□□ -1.48
CCNL1-215ENST00000474539 RWDD1Q9H446 243 aaPredicted RBP5.79□□□□□ -1.48
CCNL1-215ENST00000474539 TNRQ92752 1358 aa5.78□□□□□ -1.48
CCNL1-215ENST00000474539 DIAPH1O60610 1272 aaKnown RBP5.78□□□□□ -1.48
CCNL1-215ENST00000474539 CC2D1BQ5T0F9 858 aaKnown RBP5.78□□□□□ -1.48
CCNL1-215ENST00000474539 NGLY1Q96IV0 654 aa5.78□□□□□ -1.48
CCNL1-215ENST00000474539 SOX12O15370 315 aa5.78□□□□□ -1.48
CCNL1-215ENST00000474539 CWC22Q9HCG8 908 aaKnown RBP5.78□□□□□ -1.48
CCNL1-215ENST00000474539 API5Q9BZZ5 524 aaKnown RBP5.77□□□□□ -1.49
CCNL1-215ENST00000474539 NEO1Q92859 1461 aa5.77□□□□□ -1.49
CCNL1-215ENST00000474539 RPRD2Q5VT52 1461 aaKnown RBP5.77□□□□□ -1.49
CCNL1-215ENST00000474539 CHAF1AQ13111 956 aaPredicted RBP5.77□□□□□ -1.49
CCNL1-215ENST00000474539 DHX29Q7Z478 1369 aaKnown RBP5.77□□□□□ -1.49
CCNL1-215ENST00000474539 CSPP1Q1MSJ5 1256 aa5.77□□□□□ -1.49
CCNL1-215ENST00000474539 ESCO1Q5FWF5 840 aa5.77□□□□□ -1.49
CCNL1-215ENST00000474539 KANK4Q5T7N3 995 aaPredicted RBP5.77□□□□□ -1.49
CCNL1-215ENST00000474539 KIF6Q6ZMV9 814 aa5.77□□□□□ -1.49
CCNL1-215ENST00000474539 DNAJC5BQ9UF47 199 aa5.77□□□□□ -1.49
CCNL1-215ENST00000474539 RTEL1-TNFRSF6BF6WH68 1400 aa5.77□□□□□ -1.49
CCNL1-215ENST00000474539 HSPA5P11021 654 aaKnown RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 CDCA7Q9BWT1 371 aaPredicted RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 ZNF652Q9Y2D9 606 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 UNC13AQ9UPW8 1703 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 PLCH2O75038 1416 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 GNAI1P63096 354 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 ITSN2Q9NZM3 1697 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 MYBBP1AQ9BQG0 1328 aaKnown RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 UHRF1BP1Q6BDS2 1440 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 ASXL2Q76L83 1435 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 UGGT2Q9NYU1 1516 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 ABCC2Q92887 1545 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 A0A087WZG4 1122 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 TNNT2P45379 298 aaPredicted RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 MFAP1P55081 439 aaKnown RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 CPLX2Q6PUV4 134 aaKnown RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 AFAP1Q8N556 730 aa5.76□□□□□ -1.49
CCNL1-215ENST00000474539 ZNF330Q9Y3S2 320 aaPredicted RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 MINK1Q8N4C8 1332 aaPredicted RBP5.76□□□□□ -1.49
CCNL1-215ENST00000474539 NLRP6P59044 892 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 TEX13AQ9BXU3 409 aaPredicted RBP5.75□□□□□ -1.49
CCNL1-215ENST00000474539 NLRP2Q9NX02 1062 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 TCEAL9Q9UHQ7 104 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 ISY1Q9ULR0 285 aaKnown RBP5.75□□□□□ -1.49
CCNL1-215ENST00000474539 ERBINQ96RT1 1412 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 GNL2Q13823 731 aaKnown RBP5.75□□□□□ -1.49
CCNL1-215ENST00000474539 ADAMTS12P58397 1594 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 NEUROD2Q15784 382 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 NBPF8Q3BBV2 869 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 NBPF14Q5TI25 921 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 RUFY2Q8WXA3 655 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 PRDM11Q9NQV5 511 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 GNL3LQ9NVN8 582 aaKnown RBP5.75□□□□□ -1.49
CCNL1-215ENST00000474539 KIF21AQ7Z4S6 1674 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 UHRF1BP1LA0JNW5 1464 aa5.75□□□□□ -1.49
CCNL1-215ENST00000474539 ABTB2Q8N961 1025 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 L3MBTL2Q969R5 705 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 SENP3Q9H4L4 574 aaPredicted RBP5.74□□□□□ -1.49
CCNL1-215ENST00000474539 SYNE3Q6ZMZ3 975 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 SALL2Q9Y467 1007 aaPredicted RBP5.74□□□□□ -1.49
CCNL1-215ENST00000474539 NUP160Q12769 1436 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 AMOTQ4VCS5 1084 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 VPS37DQ86XT2 251 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 MAGI2Q86UL8 1455 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 NPHP3Q7Z494 1330 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 DUOX2Q9NRD8 1548 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 ZNF608Q9ULD9 1512 aaPredicted RBP5.74□□□□□ -1.49
CCNL1-215ENST00000474539 TIAM1Q13009 1591 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 GOLGA6L4A6NEF3 574 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 E9PSI1 815 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.74□□□□□ -1.49
CCNL1-215ENST00000474539 CHMP3Q9Y3E7 222 aa5.74□□□□□ -1.49
CCNL1-215ENST00000474539 HSP90AB3PQ58FF7 597 aa5.73□□□□□ -1.49
CCNL1-215ENST00000474539 RAPGEF6Q8TEU7 1601 aa5.73□□□□□ -1.49
CCNL1-215ENST00000474539 SLC3A2P08195 630 aaKnown RBP5.73□□□□□ -1.49
CCNL1-215ENST00000474539 CT47B1P0C2W7 299 aaPredicted RBP5.73□□□□□ -1.49
CCNL1-215ENST00000474539 KIAA2012Q0VF49 1180 aa5.73□□□□□ -1.49
CCNL1-215ENST00000474539 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
CCNL1-215ENST00000474539 NSD2O96028 1365 aa5.73□□□□□ -1.49
CCNL1-215ENST00000474539 USP47Q96K76 1375 aa5.73□□□□□ -1.49
CCNL1-215ENST00000474539 TOM1L2Q6ZVM7 507 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 ZNF428Q96B54 188 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 LTV1Q96GA3 475 aaPredicted RBP5.72□□□□□ -1.49
CCNL1-215ENST00000474539 KIF16BQ96L93 1317 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 NCOA1Q15788 1441 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 FRAT1Q92837 279 aaPredicted RBP5.72□□□□□ -1.49
CCNL1-215ENST00000474539 SIN3AQ96ST3 1273 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 A2MP01023 1474 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 TPM4P67936 248 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 PUS7Q96PZ0 661 aaKnown RBP5.72□□□□□ -1.49
CCNL1-215ENST00000474539 CCDC61Q9Y6R9 512 aa5.72□□□□□ -1.49
CCNL1-215ENST00000474539 ATP10AO60312 1499 aa5.71□□□□□ -1.49
CCNL1-215ENST00000474539 AKAP17AQ02040 695 aaKnown RBP5.71□□□□□ -1.49
CCNL1-215ENST00000474539 USP35Q9P2H5 1018 aa5.71□□□□□ -1.49
CCNL1-215ENST00000474539 PPP1R1BQ9UD71 204 aaPredicted RBP5.71□□□□□ -1.49
CCNL1-215ENST00000474539 TTC21AQ8NDW8 1320 aa5.71□□□□□ -1.5
CCNL1-215ENST00000474539 RAPGEF3O95398 923 aa5.71□□□□□ -1.5
CCNL1-215ENST00000474539 STARD3NLO95772 234 aa5.71□□□□□ -1.5
CCNL1-215ENST00000474539 ERC1Q8IUD2 1116 aa5.71□□□□□ -1.5
CCNL1-215ENST00000474539 CCDC47Q96A33 483 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms