RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 COPS2P61201 443 aa8.63□□□□□ -1.03
BRCA1-212ENST00000473961 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
BRCA1-212ENST00000473961 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
BRCA1-212ENST00000473961 ZNF598Q86UK7 904 aaKnown RBP8.63□□□□□ -1.03
BRCA1-212ENST00000473961 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
BRCA1-212ENST00000473961 NFX1Q12986 1120 aaKnown RBP8.62□□□□□ -1.03
BRCA1-212ENST00000473961 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
BRCA1-212ENST00000473961 GDF9O60383 454 aa8.61□□□□□ -1.03
BRCA1-212ENST00000473961 INSM1Q01101 510 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-212ENST00000473961 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
BRCA1-212ENST00000473961 TNFRSF10AO00220 468 aa8.59□□□□□ -1.03
BRCA1-212ENST00000473961 RNF40O75150 1001 aa8.59□□□□□ -1.03
BRCA1-212ENST00000473961 ZNF697Q5TEC3 545 aa8.59□□□□□ -1.03
BRCA1-212ENST00000473961 ZPR1O75312 459 aa8.58□□□□□ -1.04
BRCA1-212ENST00000473961 EN1Q05925 392 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-212ENST00000473961 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
BRCA1-212ENST00000473961 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
BRCA1-212ENST00000473961 CDCA7LQ96GN5 454 aa8.57□□□□□ -1.04
BRCA1-212ENST00000473961 DACH1Q9UI36 760 aa8.57□□□□□ -1.04
BRCA1-212ENST00000473961 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
BRCA1-212ENST00000473961 DDX12PQ92771 950 aa8.56□□□□□ -1.04
BRCA1-212ENST00000473961 TATDN2Q93075 761 aa8.56□□□□□ -1.04
BRCA1-212ENST00000473961 TESPA1A2RU30 521 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-212ENST00000473961 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
BRCA1-212ENST00000473961 NBPF26B4DH59 902 aa8.54□□□□□ -1.04
BRCA1-212ENST00000473961 MAP3K7O43318 606 aa8.54□□□□□ -1.04
BRCA1-212ENST00000473961 PRSS12P56730 875 aa8.54□□□□□ -1.04
BRCA1-212ENST00000473961 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
BRCA1-212ENST00000473961 GMPR2Q9P2T1 348 aaKnown RBP8.54□□□□□ -1.04
BRCA1-212ENST00000473961 DPYSL4O14531 572 aa8.53□□□□□ -1.04
BRCA1-212ENST00000473961 ANKLE1Q8NAG6 615 aa8.53□□□□□ -1.04
BRCA1-212ENST00000473961 ARIH1Q9Y4X5 557 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-212ENST00000473961 SEMA3EO15041 775 aa8.52□□□□□ -1.05
BRCA1-212ENST00000473961 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
BRCA1-212ENST00000473961 PPEF1O14829 653 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-212ENST00000473961 TLL1O43897 1013 aa8.5□□□□□ -1.05
BRCA1-212ENST00000473961 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-212ENST00000473961 CAMK2BQ13554 666 aa8.49□□□□□ -1.05
BRCA1-212ENST00000473961 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
BRCA1-212ENST00000473961 DAXXQ9UER7 740 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-212ENST00000473961 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
BRCA1-212ENST00000473961 NUDT18Q6ZVK8 323 aa8.47□□□□□ -1.05
BRCA1-212ENST00000473961 S1PR4O95977 384 aa8.46□□□□□ -1.06
BRCA1-212ENST00000473961 AVPP01185 164 aa8.46□□□□□ -1.06
BRCA1-212ENST00000473961 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
BRCA1-212ENST00000473961 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
BRCA1-212ENST00000473961 PKD2L1Q9P0L9 805 aa8.46□□□□□ -1.06
BRCA1-212ENST00000473961 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.06
BRCA1-212ENST00000473961 SUZ12Q15022 739 aaKnown RBP8.45□□□□□ -1.06
BRCA1-212ENST00000473961 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
BRCA1-212ENST00000473961 SLF2Q8IX21 1173 aa8.45□□□□□ -1.06
BRCA1-212ENST00000473961 CERKQ8TCT0 537 aa8.45□□□□□ -1.06
BRCA1-212ENST00000473961 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
BRCA1-212ENST00000473961 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-212ENST00000473961 PLA2G2CQ5R387 149 aa8.44□□□□□ -1.06
BRCA1-212ENST00000473961 AXIN1O15169 862 aa8.43□□□□□ -1.06
BRCA1-212ENST00000473961 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
BRCA1-212ENST00000473961 TERTO14746 1132 aaKnown RBP8.42□□□□□ -1.06
BRCA1-212ENST00000473961 ZMYND10O75800 440 aa8.42□□□□□ -1.06
BRCA1-212ENST00000473961 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
BRCA1-212ENST00000473961 SPDYE16A6NNV3 312 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-212ENST00000473961 GPIHBP1Q8IV16 184 aa8.41□□□□□ -1.06
BRCA1-212ENST00000473961 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-212ENST00000473961 FOXC1Q12948 553 aa8.4□□□□□ -1.06
BRCA1-212ENST00000473961 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-212ENST00000473961 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
BRCA1-212ENST00000473961 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
BRCA1-212ENST00000473961 PRR14Q9BWN1 585 aa8.39□□□□□ -1.07
BRCA1-212ENST00000473961 TOR4AQ9NXH8 423 aa8.39□□□□□ -1.07
BRCA1-212ENST00000473961 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
BRCA1-212ENST00000473961 FAM181BA6NEQ2 426 aa8.38□□□□□ -1.07
BRCA1-212ENST00000473961 BARGINQ6ZT62 677 aa8.38□□□□□ -1.07
BRCA1-212ENST00000473961 CDHR5Q9HBB8 845 aa8.38□□□□□ -1.07
BRCA1-212ENST00000473961 PDIA6Q15084 440 aa8.37□□□□□ -1.07
BRCA1-212ENST00000473961 KRI1Q8N9T8 703 aaKnown RBP8.37□□□□□ -1.07
BRCA1-212ENST00000473961 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
BRCA1-212ENST00000473961 AK7Q96M32 723 aa8.36□□□□□ -1.07
BRCA1-212ENST00000473961 ADH1BP00325 375 aa8.35□□□□□ -1.07
BRCA1-212ENST00000473961 TTC13Q8NBP0 860 aa8.35□□□□□ -1.07
BRCA1-212ENST00000473961 SLC4A3P48751 1232 aa8.32□□□□□ -1.08
BRCA1-212ENST00000473961 RBM26Q5T8P6 1007 aaKnown RBP8.32□□□□□ -1.08
BRCA1-212ENST00000473961 ATP13A2Q9NQ11 1180 aa8.32□□□□□ -1.08
BRCA1-212ENST00000473961 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-212ENST00000473961 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
BRCA1-212ENST00000473961 PADI6Q6TGC4 694 aa8.3□□□□□ -1.08
BRCA1-212ENST00000473961 CYP4X1Q8N118 509 aa8.3□□□□□ -1.08
BRCA1-212ENST00000473961 ZSCAN1Q8NBB4 408 aa8.3□□□□□ -1.08
BRCA1-212ENST00000473961 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
BRCA1-212ENST00000473961 EYA1Q99502 592 aa8.29□□□□□ -1.08
BRCA1-212ENST00000473961 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
BRCA1-212ENST00000473961 ARXQ96QS3 562 aa8.28□□□□□ -1.08
BRCA1-212ENST00000473961 GMPRP36959 345 aa8.27□□□□□ -1.09
BRCA1-212ENST00000473961 RPIAP49247 311 aa8.26□□□□□ -1.09
BRCA1-212ENST00000473961 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
BRCA1-212ENST00000473961 KMT5BQ4FZB7 885 aa8.24□□□□□ -1.09
BRCA1-212ENST00000473961 SENP2Q9HC62 589 aa8.24□□□□□ -1.09
BRCA1-212ENST00000473961 NPDC1Q9NQX5 325 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-212ENST00000473961 OSBPP22059 807 aa8.23□□□□□ -1.09
BRCA1-212ENST00000473961 NR1I2O75469 434 aa8.22□□□□□ -1.09
BRCA1-212ENST00000473961 CFHP08603 1231 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms