RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
MACF1-215ENST00000473843 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
MACF1-215ENST00000473843 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.48
MACF1-215ENST00000473843 RGS12O14924 1447 aa18.07■□□□□ 0.48
MACF1-215ENST00000473843 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
MACF1-215ENST00000473843 DIP2AQ14689 1571 aa18.05■□□□□ 0.48
MACF1-215ENST00000473843 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
MACF1-215ENST00000473843 AFF2P51816 1311 aa18.03■□□□□ 0.48
MACF1-215ENST00000473843 NCOA3Q9Y6Q9 1424 aa18.02■□□□□ 0.48
MACF1-215ENST00000473843 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.47
MACF1-215ENST00000473843 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.01■□□□□ 0.47
MACF1-215ENST00000473843 ADGRB3O60242 1522 aa18■□□□□ 0.47
MACF1-215ENST00000473843 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
MACF1-215ENST00000473843 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
MACF1-215ENST00000473843 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
MACF1-215ENST00000473843 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
MACF1-215ENST00000473843 RBM6P78332 1123 aaKnown RBP17.98■□□□□ 0.47
MACF1-215ENST00000473843 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
MACF1-215ENST00000473843 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
MACF1-215ENST00000473843 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
MACF1-215ENST00000473843 IDI1Q13907 227 aa17.96■□□□□ 0.47
MACF1-215ENST00000473843 CADPS2Q86UW7 1296 aa17.95■□□□□ 0.46
MACF1-215ENST00000473843 BCANQ96GW7 911 aa17.95■□□□□ 0.46
MACF1-215ENST00000473843 MYO5BQ9ULV0 1848 aa17.93■□□□□ 0.46
MACF1-215ENST00000473843 ERBINQ96RT1 1412 aa17.93■□□□□ 0.46
MACF1-215ENST00000473843 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
MACF1-215ENST00000473843 QTRT2Q9H974 415 aaKnown RBP17.93■□□□□ 0.46
MACF1-215ENST00000473843 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
MACF1-215ENST00000473843 SETD5Q9C0A6 1442 aa17.92■□□□□ 0.46
MACF1-215ENST00000473843 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
MACF1-215ENST00000473843 KCNA4P22459 653 aa17.92■□□□□ 0.46
MACF1-215ENST00000473843 ATF3P18847 181 aa17.91■□□□□ 0.46
MACF1-215ENST00000473843 LMTK2Q8IWU2 1503 aa17.91■□□□□ 0.46
MACF1-215ENST00000473843 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
MACF1-215ENST00000473843 C19orf44Q9H6X5 657 aa17.9■□□□□ 0.46
MACF1-215ENST00000473843 KANK1Q14678 1352 aa17.9■□□□□ 0.46
MACF1-215ENST00000473843 ZFYVE9O95405 1425 aa17.89■□□□□ 0.46
MACF1-215ENST00000473843 NOS1P29475 1434 aa17.89■□□□□ 0.46
MACF1-215ENST00000473843 ASXL1Q8IXJ9 1541 aa17.89■□□□□ 0.45
MACF1-215ENST00000473843 NGLY1Q96IV0 654 aa17.89■□□□□ 0.45
MACF1-215ENST00000473843 C8orf37Q96NL8 207 aa17.89■□□□□ 0.45
MACF1-215ENST00000473843 KIF15Q9NS87 1388 aa17.88■□□□□ 0.45
MACF1-215ENST00000473843 CROCC2H7BZ55 1655 aa17.87■□□□□ 0.45
MACF1-215ENST00000473843 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
MACF1-215ENST00000473843 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
MACF1-215ENST00000473843 GCC2Q8IWJ2 1684 aa17.87■□□□□ 0.45
MACF1-215ENST00000473843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.459e-7■□□□□ 9.7
MACF1-215ENST00000473843 DCCP43146 1447 aa17.86■□□□□ 0.45
MACF1-215ENST00000473843 LRP5O75197 1615 aa17.85■□□□□ 0.45
MACF1-215ENST00000473843 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
MACF1-215ENST00000473843 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
MACF1-215ENST00000473843 MYOM3Q5VTT5 1437 aa17.83■□□□□ 0.45
MACF1-215ENST00000473843 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.45
MACF1-215ENST00000473843 PNPLA6Q8IY17 1366 aa17.83■□□□□ 0.45
MACF1-215ENST00000473843 PIK3R4Q99570 1358 aa17.83■□□□□ 0.45
MACF1-215ENST00000473843 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.44
MACF1-215ENST00000473843 LRRC59Q96AG4 307 aaKnown RBP17.83■□□□□ 0.44
MACF1-215ENST00000473843 EP400Q96L91 3159 aa17.83■□□□□ 0.44
MACF1-215ENST00000473843 CCDC125Q86Z20 511 aa17.82■□□□□ 0.44
MACF1-215ENST00000473843 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
MACF1-215ENST00000473843 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
MACF1-215ENST00000473843 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
MACF1-215ENST00000473843 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
MACF1-215ENST00000473843 MST1RQ04912 1400 aa17.79■□□□□ 0.44
MACF1-215ENST00000473843 TRPM2O94759 1503 aa17.78■□□□□ 0.44
MACF1-215ENST00000473843 RRP7BPQ9NSQ0 103 aa17.77■□□□□ 0.44
MACF1-215ENST00000473843 TRPC5Q9UL62 973 aaPredicted RBP17.77■□□□□ 0.44
MACF1-215ENST00000473843 RPRD2Q5VT52 1461 aaKnown RBP17.76■□□□□ 0.43
MACF1-215ENST00000473843 ATRNO75882 1429 aa17.75■□□□□ 0.43
MACF1-215ENST00000473843 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
MACF1-215ENST00000473843 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
MACF1-215ENST00000473843 USP21Q9UK80 565 aa17.75■□□□□ 0.43
MACF1-215ENST00000473843 XRN1Q8IZH2 1706 aaKnown RBP17.75■□□□□ 0.43
MACF1-215ENST00000473843 LAMC1P11047 1609 aa17.73■□□□□ 0.43
MACF1-215ENST00000473843 ABCC5O15440 1437 aa17.72■□□□□ 0.43
MACF1-215ENST00000473843 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
MACF1-215ENST00000473843 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
MACF1-215ENST00000473843 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
MACF1-215ENST00000473843 FNBP4Q8N3X1 1017 aaPredicted RBP17.7■□□□□ 0.42
MACF1-215ENST00000473843 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
MACF1-215ENST00000473843 BLMP54132 1417 aaPredicted RBP17.7■□□□□ 0.42
MACF1-215ENST00000473843 UNC13BO14795 1591 aa17.7■□□□□ 0.42
MACF1-215ENST00000473843 MARF1Q9Y4F3 1742 aaKnown RBP17.68■□□□□ 0.42
MACF1-215ENST00000473843 COL22A1Q8NFW1 1626 aaPredicted RBP17.68■□□□□ 0.42
MACF1-215ENST00000473843 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
MACF1-215ENST00000473843 DAPK1P53355 1430 aa17.67■□□□□ 0.42
MACF1-215ENST00000473843 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
MACF1-215ENST00000473843 PTPN23Q9H3S7 1636 aa17.66■□□□□ 0.42
MACF1-215ENST00000473843 ANKRD30AQ9BXX3 1397 aa17.66■□□□□ 0.42
MACF1-215ENST00000473843 SPHKAPQ2M3C7 1700 aa17.65■□□□□ 0.42
MACF1-215ENST00000473843 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.65■□□□□ 0.42
MACF1-215ENST00000473843 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
MACF1-215ENST00000473843 BRWD3Q6RI45 1802 aa17.64■□□□□ 0.41
MACF1-215ENST00000473843 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
MACF1-215ENST00000473843 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
MACF1-215ENST00000473843 DEFB132Q7Z7B7 95 aa17.61■□□□□ 0.41
MACF1-215ENST00000473843 SOS2Q07890 1332 aaPredicted RBP17.61■□□□□ 0.41
MACF1-215ENST00000473843 C1orf167Q5SNV9 1468 aa17.61■□□□□ 0.41
MACF1-215ENST00000473843 MYOM2P54296 1465 aa17.59■□□□□ 0.41
MACF1-215ENST00000473843 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms