RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 RNF40O75150 1001 aa10.49□□□□□ -0.73
CNOT4-209ENST00000473470 BCAMP50895 628 aa10.49□□□□□ -0.73
CNOT4-209ENST00000473470 TSR3Q9UJK0 312 aaKnown RBP10.49□□□□□ -0.73
CNOT4-209ENST00000473470 FAM161AQ3B820 660 aa10.48□□□□□ -0.73
CNOT4-209ENST00000473470 SWT1Q5T5J6 900 aaKnown RBP10.48□□□□□ -0.73
CNOT4-209ENST00000473470 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
CNOT4-209ENST00000473470 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
CNOT4-209ENST00000473470 SULF1Q8IWU6 871 aa10.46□□□□□ -0.73
CNOT4-209ENST00000473470 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
CNOT4-209ENST00000473470 PPP4CP60510 307 aa10.44□□□□□ -0.74
CNOT4-209ENST00000473470 PTPN5P54829 565 aa10.43□□□□□ -0.74
CNOT4-209ENST00000473470 DAXXQ9UER7 740 aaPredicted RBP10.43□□□□□ -0.74
CNOT4-209ENST00000473470 CLCN1P35523 988 aa10.42□□□□□ -0.74
CNOT4-209ENST00000473470 AK7Q96M32 723 aa10.42□□□□□ -0.74
CNOT4-209ENST00000473470 AMHR2Q16671 573 aa10.41□□□□□ -0.74
CNOT4-209ENST00000473470 KMT5BQ4FZB7 885 aa10.4□□□□□ -0.74
CNOT4-209ENST00000473470 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
CNOT4-209ENST00000473470 WBP1LQ9NX94 342 aa10.4□□□□□ -0.74
CNOT4-209ENST00000473470 PHOX2BQ99453 314 aa10.39□□□□□ -0.75
CNOT4-209ENST00000473470 TTLL12Q14166 644 aaPredicted RBP10.38□□□□□ -0.75
CNOT4-209ENST00000473470 MDM2Q00987 491 aaPredicted RBP10.37□□□□□ -0.75
CNOT4-209ENST00000473470 CFHP08603 1231 aa10.36□□□□□ -0.75
CNOT4-209ENST00000473470 RDH13Q8NBN7 331 aa10.36□□□□□ -0.75
CNOT4-209ENST00000473470 SLC24A3Q9HC58 644 aa10.35□□□□□ -0.75
CNOT4-209ENST00000473470 DDX11L8A8MPP1 907 aa10.34□□□□□ -0.75
CNOT4-209ENST00000473470 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
CNOT4-209ENST00000473470 TRIM66O15016 1216 aa10.33□□□□□ -0.76
CNOT4-209ENST00000473470 ITGBL1O95965 494 aaPredicted RBP10.31□□□□□ -0.76
CNOT4-209ENST00000473470 SLC10A3P09131 477 aa10.31□□□□□ -0.76
CNOT4-209ENST00000473470 APLP1P51693 650 aa10.31□□□□□ -0.76
CNOT4-209ENST00000473470 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
CNOT4-209ENST00000473470 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
CNOT4-209ENST00000473470 CD46P15529 392 aa10.3□□□□□ -0.76
CNOT4-209ENST00000473470 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
CNOT4-209ENST00000473470 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
CNOT4-209ENST00000473470 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
CNOT4-209ENST00000473470 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
CNOT4-209ENST00000473470 PDE4DQ08499 809 aa10.29□□□□□ -0.76
CNOT4-209ENST00000473470 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
CNOT4-209ENST00000473470 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.77
CNOT4-209ENST00000473470 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
CNOT4-209ENST00000473470 GCGRP47871 477 aa10.26□□□□□ -0.77
CNOT4-209ENST00000473470 USP46P62068 366 aa10.26□□□□□ -0.77
CNOT4-209ENST00000473470 IL21Q9HBE4 155 aa10.26□□□□□ -0.77
CNOT4-209ENST00000473470 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
CNOT4-209ENST00000473470 KCNC4Q03721 635 aa10.25□□□□□ -0.77
CNOT4-209ENST00000473470 MTRQ99707 1265 aa10.25□□□□□ -0.77
CNOT4-209ENST00000473470 NR1I2O75469 434 aa10.23□□□□□ -0.77
CNOT4-209ENST00000473470 KDM4AO75164 1064 aa10.22□□□□□ -0.77
CNOT4-209ENST00000473470 SSTR3P32745 418 aaPredicted RBP10.22□□□□□ -0.77
CNOT4-209ENST00000473470 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
CNOT4-209ENST00000473470 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
CNOT4-209ENST00000473470 REPIN1Q9BWE0 567 aaKnown RBP10.21□□□□□ -0.77
CNOT4-209ENST00000473470 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
CNOT4-209ENST00000473470 FUT2Q10981 343 aa10.2□□□□□ -0.78
CNOT4-209ENST00000473470 TJAP1Q5JTD0 557 aa10.2□□□□□ -0.78
CNOT4-209ENST00000473470 BLOC1S3Q6QNY0 202 aa10.2□□□□□ -0.78
CNOT4-209ENST00000473470 COPS2P61201 443 aa10.19□□□□□ -0.78
CNOT4-209ENST00000473470 HOXA2O43364 376 aa10.17□□□□□ -0.78
CNOT4-209ENST00000473470 ZPR1O75312 459 aa10.17□□□□□ -0.78
CNOT4-209ENST00000473470 BEGAINQ9BUH8 593 aa10.17□□□□□ -0.78
CNOT4-209ENST00000473470 MS4A1P11836 297 aa10.16□□□□□ -0.78
CNOT4-209ENST00000473470 MORN1Q5T089 497 aa10.16□□□□□ -0.78
CNOT4-209ENST00000473470 Q3C1V9 767 aa10.15□□□□□ -0.78
CNOT4-209ENST00000473470 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
CNOT4-209ENST00000473470 KDM4CQ9H3R0 1056 aa10.15□□□□□ -0.78
CNOT4-209ENST00000473470 A0A0G2JS52 829 aa10.14□□□□□ -0.79
CNOT4-209ENST00000473470 GGCXP38435 758 aa10.14□□□□□ -0.79
CNOT4-209ENST00000473470 ADH1BP00325 375 aa10.13□□□□□ -0.79
CNOT4-209ENST00000473470 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
CNOT4-209ENST00000473470 PUS10Q3MIT2 529 aaKnown RBP10.13□□□□□ -0.79
CNOT4-209ENST00000473470 SALL2Q9Y467 1007 aaPredicted RBP10.13□□□□□ -0.79
CNOT4-209ENST00000473470 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-209ENST00000473470 GJA5P36382 358 aa10.11□□□□□ -0.79
CNOT4-209ENST00000473470 SPIRE2Q8WWL2 714 aa10.11□□□□□ -0.79
CNOT4-209ENST00000473470 GPBP1L1Q9HC44 474 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-209ENST00000473470 TLL1O43897 1013 aa10.1□□□□□ -0.79
CNOT4-209ENST00000473470 SLC27A5Q9Y2P5 690 aa10.1□□□□□ -0.79
CNOT4-209ENST00000473470 SCUBE3Q8IX30 993 aa10.09□□□□□ -0.79
CNOT4-209ENST00000473470 ZNF516Q92618 1163 aa10.09□□□□□ -0.79
CNOT4-209ENST00000473470 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
CNOT4-209ENST00000473470 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
CNOT4-209ENST00000473470 FDX1P10109 184 aa10.07□□□□□ -0.8
CNOT4-209ENST00000473470 MSS51Q4VC12 460 aa10.07□□□□□ -0.8
CNOT4-209ENST00000473470 SPSB2Q99619 263 aa10.07□□□□□ -0.8
CNOT4-209ENST00000473470 RGS20O76081 388 aa10.06□□□□□ -0.8
CNOT4-209ENST00000473470 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
CNOT4-209ENST00000473470 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
CNOT4-209ENST00000473470 THAP11Q96EK4 314 aa10.05□□□□□ -0.8
CNOT4-209ENST00000473470 SLC6A16Q9GZN6 736 aa10.05□□□□□ -0.8
CNOT4-209ENST00000473470 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
CNOT4-209ENST00000473470 BRICD5Q6PL45 260 aa10.04□□□□□ -0.8
CNOT4-209ENST00000473470 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
CNOT4-209ENST00000473470 SPTLC1O15269 473 aa10.03□□□□□ -0.8
CNOT4-209ENST00000473470 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
CNOT4-209ENST00000473470 CLK2P49760 499 aaKnown RBP10.03□□□□□ -0.8
CNOT4-209ENST00000473470 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
CNOT4-209ENST00000473470 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
CNOT4-209ENST00000473470 MYSM1Q5VVJ2 828 aa10.03□□□□□ -0.8
CNOT4-209ENST00000473470 RNF19BQ6ZMZ0 732 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms