RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 SLC4A3P48751 1232 aa10.19□□□□□ -0.78
CCDC66-215ENST00000473322 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
CCDC66-215ENST00000473322 TPRNQ4KMQ1 711 aa10.17□□□□□ -0.78
CCDC66-215ENST00000473322 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
CCDC66-215ENST00000473322 MINK1Q8N4C8 1332 aaPredicted RBP10.15□□□□□ -0.78
CCDC66-215ENST00000473322 IFFO2Q5TF58 517 aa10.15□□□□□ -0.78
CCDC66-215ENST00000473322 IRF6O14896 467 aa10.14□□□□□ -0.79
CCDC66-215ENST00000473322 RNF40O75150 1001 aa10.13□□□□□ -0.79
CCDC66-215ENST00000473322 ITGBL1O95965 494 aaPredicted RBP10.13□□□□□ -0.79
CCDC66-215ENST00000473322 ZC3H15Q8WU90 426 aaKnown RBP10.12□□□□□ -0.79
CCDC66-215ENST00000473322 ZMYND10O75800 440 aa10.11□□□□□ -0.79
CCDC66-215ENST00000473322 PHOX2BQ99453 314 aa10.11□□□□□ -0.79
CCDC66-215ENST00000473322 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
CCDC66-215ENST00000473322 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
CCDC66-215ENST00000473322 DAXXQ9UER7 740 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-215ENST00000473322 APLP1P51693 650 aa10.09□□□□□ -0.79
CCDC66-215ENST00000473322 RSPH4AQ5TD94 716 aa10.08□□□□□ -0.8
CCDC66-215ENST00000473322 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
CCDC66-215ENST00000473322 KCNC4Q03721 635 aa10.06□□□□□ -0.8
CCDC66-215ENST00000473322 SLC10A3P09131 477 aa10.05□□□□□ -0.8
CCDC66-215ENST00000473322 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
CCDC66-215ENST00000473322 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
CCDC66-215ENST00000473322 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
CCDC66-215ENST00000473322 KRI1Q8N9T8 703 aaKnown RBP10.04□□□□□ -0.8
CCDC66-215ENST00000473322 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
CCDC66-215ENST00000473322 CFHP08603 1231 aa10.03□□□□□ -0.8
CCDC66-215ENST00000473322 MTRQ99707 1265 aa10.03□□□□□ -0.8
CCDC66-215ENST00000473322 IL21Q9HBE4 155 aa10.03□□□□□ -0.8
CCDC66-215ENST00000473322 NLRP7Q8WX94 980 aa10.02□□□□□ -0.81
CCDC66-215ENST00000473322 DDX11L8A8MPP1 907 aa10□□□□□ -0.81
CCDC66-215ENST00000473322 CLCN1P35523 988 aa9.99□□□□□ -0.81
CCDC66-215ENST00000473322 PCDHB3Q9Y5E6 796 aa9.99□□□□□ -0.81
CCDC66-215ENST00000473322 A0A0G2JS52 829 aa9.98□□□□□ -0.81
CCDC66-215ENST00000473322 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
CCDC66-215ENST00000473322 RDH13Q8NBN7 331 aa9.98□□□□□ -0.81
CCDC66-215ENST00000473322 GPCPD1Q9NPB8 672 aa9.98□□□□□ -0.81
CCDC66-215ENST00000473322 GCGRP47871 477 aa9.97□□□□□ -0.81
CCDC66-215ENST00000473322 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
CCDC66-215ENST00000473322 AMHR2Q16671 573 aa9.96□□□□□ -0.82
CCDC66-215ENST00000473322 CD46P15529 392 aa9.95□□□□□ -0.82
CCDC66-215ENST00000473322 COPS2P61201 443 aa9.95□□□□□ -0.82
CCDC66-215ENST00000473322 AK7Q96M32 723 aa9.95□□□□□ -0.82
CCDC66-215ENST00000473322 ZPR1O75312 459 aa9.94□□□□□ -0.82
CCDC66-215ENST00000473322 RGS20O76081 388 aa9.94□□□□□ -0.82
CCDC66-215ENST00000473322 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
CCDC66-215ENST00000473322 ZNF516Q92618 1163 aa9.94□□□□□ -0.82
CCDC66-215ENST00000473322 FAM217BQ9NTX9 383 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-215ENST00000473322 NR1I2O75469 434 aa9.92□□□□□ -0.82
CCDC66-215ENST00000473322 TRIM66O15016 1216 aa9.91□□□□□ -0.82
CCDC66-215ENST00000473322 ATP6V1AP38606 617 aa9.91□□□□□ -0.82
CCDC66-215ENST00000473322 FUT2Q10981 343 aa9.9□□□□□ -0.82
CCDC66-215ENST00000473322 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
CCDC66-215ENST00000473322 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
CCDC66-215ENST00000473322 MORN1Q5T089 497 aa9.89□□□□□ -0.83
CCDC66-215ENST00000473322 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
CCDC66-215ENST00000473322 REPIN1Q9BWE0 567 aaKnown RBP9.89□□□□□ -0.83
CCDC66-215ENST00000473322 NKX2-3Q8TAU0 364 aa9.88□□□□□ -0.83
CCDC66-215ENST00000473322 KDM4AO75164 1064 aa9.87□□□□□ -0.83
CCDC66-215ENST00000473322 USP46P62068 366 aa9.87□□□□□ -0.83
CCDC66-215ENST00000473322 PUS10Q3MIT2 529 aaKnown RBP9.87□□□□□ -0.83
CCDC66-215ENST00000473322 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
CCDC66-215ENST00000473322 SSTR3P32745 418 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-215ENST00000473322 PPP1R18Q6NYC8 613 aa9.86□□□□□ -0.83
CCDC66-215ENST00000473322 ERICH6Q7L0X2 663 aa9.86□□□□□ -0.83
CCDC66-215ENST00000473322 GGCXP38435 758 aa9.85□□□□□ -0.83
CCDC66-215ENST00000473322 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
CCDC66-215ENST00000473322 PARP9Q8IXQ6 854 aa9.85□□□□□ -0.83
CCDC66-215ENST00000473322 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-215ENST00000473322 SLC27A5Q9Y2P5 690 aa9.84□□□□□ -0.83
CCDC66-215ENST00000473322 ADH1BP00325 375 aa9.83□□□□□ -0.84
CCDC66-215ENST00000473322 THAP11Q96EK4 314 aa9.83□□□□□ -0.84
CCDC66-215ENST00000473322 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.83□□□□□ -0.84
CCDC66-215ENST00000473322 TLL1O43897 1013 aa9.82□□□□□ -0.84
CCDC66-215ENST00000473322 PDE4DQ08499 809 aa9.82□□□□□ -0.84
CCDC66-215ENST00000473322 SPSB2Q99619 263 aa9.81□□□□□ -0.84
CCDC66-215ENST00000473322 HOXA2O43364 376 aa9.8□□□□□ -0.84
CCDC66-215ENST00000473322 FMNL1O95466 1100 aaPredicted RBP9.8□□□□□ -0.84
CCDC66-215ENST00000473322 Q3C1V9 767 aa9.8□□□□□ -0.84
CCDC66-215ENST00000473322 BRICD5Q6PL45 260 aa9.8□□□□□ -0.84
CCDC66-215ENST00000473322 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
CCDC66-215ENST00000473322 BEGAINQ9BUH8 593 aa9.78□□□□□ -0.84
CCDC66-215ENST00000473322 SLC6A16Q9GZN6 736 aa9.78□□□□□ -0.84
CCDC66-215ENST00000473322 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
CCDC66-215ENST00000473322 S1PR4O95977 384 aa9.77□□□□□ -0.85
CCDC66-215ENST00000473322 MS4A1P11836 297 aa9.77□□□□□ -0.85
CCDC66-215ENST00000473322 DIXDC1Q155Q3 683 aa9.77□□□□□ -0.85
CCDC66-215ENST00000473322 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
CCDC66-215ENST00000473322 ANKLE1Q8NAG6 615 aa9.75□□□□□ -0.85
CCDC66-215ENST00000473322 V9GY48 417 aaPredicted RBP9.75□□□□□ -0.85
CCDC66-215ENST00000473322 MSS51Q4VC12 460 aa9.74□□□□□ -0.85
CCDC66-215ENST00000473322 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
CCDC66-215ENST00000473322 FAM160A2Q8N612 972 aaPredicted RBP9.74□□□□□ -0.85
CCDC66-215ENST00000473322 HLA-CQ95604 372 aa9.74□□□□□ -0.85
CCDC66-215ENST00000473322 GJA5P36382 358 aa9.73□□□□□ -0.85
CCDC66-215ENST00000473322 TMEM132AQ24JP5 1023 aa9.73□□□□□ -0.85
CCDC66-215ENST00000473322 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
CCDC66-215ENST00000473322 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
CCDC66-215ENST00000473322 FDX1P10109 184 aa9.71□□□□□ -0.86
CCDC66-215ENST00000473322 TBC1D2Q9BYX2 928 aa9.71□□□□□ -0.86
CCDC66-215ENST00000473322 MOXD2PA6NHM9 499 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms