RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
SMC4-214ENST00000472991 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
SMC4-214ENST00000472991 SGIP1Q9BQI5 828 aa13.78□□□□□ -0.2
SMC4-214ENST00000472991 C3P01024 1663 aa13.78□□□□□ -0.2
SMC4-214ENST00000472991 ZC3H13Q5T200 1668 aaKnown RBP13.78□□□□□ -0.2
SMC4-214ENST00000472991 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
SMC4-214ENST00000472991 PRDM15P57071 1507 aaPredicted RBP13.76□□□□□ -0.21
SMC4-214ENST00000472991 ANKRD50Q9ULJ7 1429 aa13.76□□□□□ -0.21
SMC4-214ENST00000472991 KIF3BO15066 747 aa13.76□□□□□ -0.21
SMC4-214ENST00000472991 ATN1P54259 1190 aaPredicted RBP13.76□□□□□ -0.21
SMC4-214ENST00000472991 UNC13BO14795 1591 aa13.75□□□□□ -0.21
SMC4-214ENST00000472991 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
SMC4-214ENST00000472991 TIE1P35590 1138 aa13.75□□□□□ -0.21
SMC4-214ENST00000472991 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
SMC4-214ENST00000472991 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
SMC4-214ENST00000472991 KDM5DQ9BY66 1539 aa13.74□□□□□ -0.21
SMC4-214ENST00000472991 FAM135AQ9P2D6 1515 aa13.74□□□□□ -0.21
SMC4-214ENST00000472991 GGT6Q6P531 493 aa13.74□□□□□ -0.21
SMC4-214ENST00000472991 CAMSAP1Q5T5Y3 1602 aa13.74□□□□□ -0.21
SMC4-214ENST00000472991 PTPRMP28827 1452 aa13.74□□□□□ -0.21
SMC4-214ENST00000472991 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
SMC4-214ENST00000472991 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
SMC4-214ENST00000472991 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
SMC4-214ENST00000472991 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
SMC4-214ENST00000472991 NAIPQ13075 1403 aa13.73□□□□□ -0.21
SMC4-214ENST00000472991 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
SMC4-214ENST00000472991 ABCC3O15438 1527 aa13.71□□□□□ -0.21
SMC4-214ENST00000472991 C7P10643 843 aa13.71□□□□□ -0.21
SMC4-214ENST00000472991 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.22
SMC4-214ENST00000472991 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.22
SMC4-214ENST00000472991 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
SMC4-214ENST00000472991 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
SMC4-214ENST00000472991 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
SMC4-214ENST00000472991 TET3O43151 1660 aa13.69□□□□□ -0.22
SMC4-214ENST00000472991 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
SMC4-214ENST00000472991 IFNLR1Q8IU57 520 aaPredicted RBP13.68□□□□□ -0.22
SMC4-214ENST00000472991 SETD1BQ9UPS6 1966 aaKnown RBP13.67□□□□□ -0.22
SMC4-214ENST00000472991 PREX1Q8TCU6 1659 aa13.66□□□□□ -0.22
SMC4-214ENST00000472991 PYGBP11216 843 aa13.66□□□□□ -0.22
SMC4-214ENST00000472991 KANK1Q14678 1352 aa13.66□□□□□ -0.22
SMC4-214ENST00000472991 WASHC2CQ9Y4E1 1318 aa13.65□□□□□ -0.22
SMC4-214ENST00000472991 EFCAB6Q5THR3 1501 aa13.65□□□□□ -0.22
SMC4-214ENST00000472991 LMTK2Q8IWU2 1503 aa13.65□□□□□ -0.22
SMC4-214ENST00000472991 E9PCH4 1651 aa13.65□□□□□ -0.22
SMC4-214ENST00000472991 ZMYM3Q14202 1370 aa13.64□□□□□ -0.23
SMC4-214ENST00000472991 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
SMC4-214ENST00000472991 PZPP20742 1482 aa13.63□□□□□ -0.23
SMC4-214ENST00000472991 GSE1Q14687 1217 aa13.63□□□□□ -0.23
SMC4-214ENST00000472991 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
SMC4-214ENST00000472991 MYO3AQ8NEV4 1616 aa13.63□□□□□ -0.23
SMC4-214ENST00000472991 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
SMC4-214ENST00000472991 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
SMC4-214ENST00000472991 NUP155O75694 1391 aa13.6□□□□□ -0.23
SMC4-214ENST00000472991 SPHKAPQ2M3C7 1700 aa13.6□□□□□ -0.23
SMC4-214ENST00000472991 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
SMC4-214ENST00000472991 NPATQ14207 1427 aa13.59□□□□□ -0.23
SMC4-214ENST00000472991 ARHGAP31Q2M1Z3 1444 aa13.59□□□□□ -0.23
SMC4-214ENST00000472991 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
SMC4-214ENST00000472991 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
SMC4-214ENST00000472991 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
SMC4-214ENST00000472991 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.23
SMC4-214ENST00000472991 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
SMC4-214ENST00000472991 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
SMC4-214ENST00000472991 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.24
SMC4-214ENST00000472991 SYNMO15061 1565 aa13.57□□□□□ -0.24
SMC4-214ENST00000472991 RPRD2Q5VT52 1461 aaKnown RBP13.56□□□□□ -0.24
SMC4-214ENST00000472991 MYO5BQ9ULV0 1848 aa13.56□□□□□ -0.24
SMC4-214ENST00000472991 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
SMC4-214ENST00000472991 TRIM52Q96A61 297 aa13.56□□□□□ -0.24
SMC4-214ENST00000472991 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
SMC4-214ENST00000472991 CEP170BQ9Y4F5 1589 aaPredicted RBP13.55□□□□□ -0.24
SMC4-214ENST00000472991 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
SMC4-214ENST00000472991 TNRQ92752 1358 aa13.55□□□□□ -0.24
SMC4-214ENST00000472991 UHRF1BP1Q6BDS2 1440 aa13.55□□□□□ -0.24
SMC4-214ENST00000472991 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
SMC4-214ENST00000472991 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
SMC4-214ENST00000472991 PIK3C2BO00750 1634 aa13.53□□□□□ -0.24
SMC4-214ENST00000472991 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
SMC4-214ENST00000472991 IER5LQ5T953 404 aa13.53□□□□□ -0.24
SMC4-214ENST00000472991 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
SMC4-214ENST00000472991 NOS1P29475 1434 aa13.52□□□□□ -0.25
SMC4-214ENST00000472991 KIF1BO60333 1816 aa13.5□□□□□ -0.25
SMC4-214ENST00000472991 UGGT1Q9NYU2 1555 aa13.5□□□□□ -0.25
SMC4-214ENST00000472991 A2ML1A8K2U0 1454 aa13.5□□□□□ -0.25
SMC4-214ENST00000472991 NLRP1Q9C000 1473 aa13.5□□□□□ -0.25
SMC4-214ENST00000472991 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
SMC4-214ENST00000472991 TRPM2O94759 1503 aa13.49□□□□□ -0.25
SMC4-214ENST00000472991 POLR1AO95602 1720 aaPredicted RBP13.49□□□□□ -0.25
SMC4-214ENST00000472991 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
SMC4-214ENST00000472991 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
SMC4-214ENST00000472991 ZNF467Q7Z7K2 595 aaPredicted RBP13.48□□□□□ -0.25
SMC4-214ENST00000472991 SEC24BO95487 1268 aa13.47□□□□□ -0.25
SMC4-214ENST00000472991 PKD2Q13563 968 aa13.47□□□□□ -0.25
SMC4-214ENST00000472991 ADGRB3O60242 1522 aa13.47□□□□□ -0.25
SMC4-214ENST00000472991 STRCQ7RTU9 1775 aa13.47□□□□□ -0.25
SMC4-214ENST00000472991 HRCP23327 699 aa13.46□□□□□ -0.25
SMC4-214ENST00000472991 MAMSTRQ6ZN01 415 aa13.46□□□□□ -0.25
SMC4-214ENST00000472991 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
SMC4-214ENST00000472991 PTPRTO14522 1441 aa13.46□□□□□ -0.26
SMC4-214ENST00000472991 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms