RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 LTKP29376 864 aa9.94□□□□□ -0.82
HDAC1-205ENST00000472928 ARHGAP23Q9P227 1491 aa9.93□□□□□ -0.82
HDAC1-205ENST00000472928 SLIT1O75093 1534 aa9.92□□□□□ -0.82
HDAC1-205ENST00000472928 SRCAPQ6ZRS2 3230 aa9.92□□□□□ -0.82
HDAC1-205ENST00000472928 UBR1Q8IWV7 1749 aa9.91□□□□□ -0.82
HDAC1-205ENST00000472928 RSPH4AQ5TD94 716 aa9.91□□□□□ -0.82
HDAC1-205ENST00000472928 MROH1Q8NDA8 1641 aa9.91□□□□□ -0.82
HDAC1-205ENST00000472928 SETD1AO15047 1707 aaKnown RBP9.9□□□□□ -0.82
HDAC1-205ENST00000472928 ARHGEF5Q12774 1597 aa9.9□□□□□ -0.82
HDAC1-205ENST00000472928 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
HDAC1-205ENST00000472928 MIER1Q8N108 512 aa9.9□□□□□ -0.82
HDAC1-205ENST00000472928 TMEM94Q12767 1356 aa9.89□□□□□ -0.83
HDAC1-205ENST00000472928 MAP3K1Q13233 1512 aa9.89□□□□□ -0.83
HDAC1-205ENST00000472928 TXNDC2Q86VQ3 553 aa9.89□□□□□ -0.83
HDAC1-205ENST00000472928 CFAP65Q6ZU64 1925 aaKnown RBP9.88□□□□□ -0.83
HDAC1-205ENST00000472928 ROBO1Q9Y6N7 1651 aa9.87□□□□□ -0.83
HDAC1-205ENST00000472928 MAST1Q9Y2H9 1570 aa9.87□□□□□ -0.83
HDAC1-205ENST00000472928 EIF2AK4Q9P2K8 1649 aaKnown RBP9.86□□□□□ -0.83
HDAC1-205ENST00000472928 TSPY4P0CV99 314 aa9.86□□□□□ -0.83
HDAC1-205ENST00000472928 TSPY10P0CW01 314 aa9.86□□□□□ -0.83
HDAC1-205ENST00000472928 TMEM2Q9UHN6 1383 aa9.86□□□□□ -0.83
HDAC1-205ENST00000472928 CEP152O94986 1710 aa9.85□□□□□ -0.83
HDAC1-205ENST00000472928 ARHGAP31Q2M1Z3 1444 aa9.85□□□□□ -0.83
HDAC1-205ENST00000472928 ECM2O94769 699 aaPredicted RBP9.85□□□□□ -0.83
HDAC1-205ENST00000472928 KCNA6P17658 529 aa9.85□□□□□ -0.83
HDAC1-205ENST00000472928 RBM33Q96EV2 1170 aaKnown RBP9.85□□□□□ -0.83
HDAC1-205ENST00000472928 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
HDAC1-205ENST00000472928 UPF1Q92900 1129 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC1-205ENST00000472928 EID1Q9Y6B2 187 aa9.84□□□□□ -0.83
HDAC1-205ENST00000472928 TET3O43151 1660 aa9.83□□□□□ -0.84
HDAC1-205ENST00000472928 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-205ENST00000472928 PIK3C2BO00750 1634 aa9.83□□□□□ -0.84
HDAC1-205ENST00000472928 JCADQ9P266 1359 aa9.83□□□□□ -0.84
HDAC1-205ENST00000472928 LRP6O75581 1613 aa9.82□□□□□ -0.84
HDAC1-205ENST00000472928 PROSER2Q86WR7 435 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-205ENST00000472928 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
HDAC1-205ENST00000472928 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
HDAC1-205ENST00000472928 NWD1Q149M9 1564 aa9.82□□□□□ -0.84
HDAC1-205ENST00000472928 COL16A1Q07092 1604 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-205ENST00000472928 EFCAB6Q5THR3 1501 aa9.81□□□□□ -0.84
HDAC1-205ENST00000472928 DUOX2Q9NRD8 1548 aa9.81□□□□□ -0.84
HDAC1-205ENST00000472928 PHLPP1O60346 1717 aa9.8□□□□□ -0.84
HDAC1-205ENST00000472928 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
HDAC1-205ENST00000472928 SLAIN2Q9P270 581 aa9.8□□□□□ -0.84
HDAC1-205ENST00000472928 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
HDAC1-205ENST00000472928 MSH6P52701 1360 aa9.79□□□□□ -0.84
HDAC1-205ENST00000472928 IDI1Q13907 227 aa9.79□□□□□ -0.84
HDAC1-205ENST00000472928 PPARGC1BQ86YN6 1023 aaKnown RBP9.79□□□□□ -0.84
HDAC1-205ENST00000472928 KIF15Q9NS87 1388 aa9.78□□□□□ -0.84
HDAC1-205ENST00000472928 KDM5AP29375 1690 aaKnown RBP9.78□□□□□ -0.84
HDAC1-205ENST00000472928 TRIM52Q96A61 297 aa9.78□□□□□ -0.84
HDAC1-205ENST00000472928 ERBINQ96RT1 1412 aa9.78□□□□□ -0.84
HDAC1-205ENST00000472928 FGD6Q6ZV73 1430 aa9.77□□□□□ -0.85
HDAC1-205ENST00000472928 ZNF772Q68DY9 489 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-205ENST00000472928 SPATA31A6Q5VVP1 1343 aa9.77□□□□□ -0.85
HDAC1-205ENST00000472928 LMTK2Q8IWU2 1503 aa9.77□□□□□ -0.85
HDAC1-205ENST00000472928 NOS1P29475 1434 aa9.76□□□□□ -0.85
HDAC1-205ENST00000472928 MYOM3Q5VTT5 1437 aa9.76□□□□□ -0.85
HDAC1-205ENST00000472928 RGL2O15211 777 aa9.76□□□□□ -0.85
HDAC1-205ENST00000472928 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
HDAC1-205ENST00000472928 ADGRB3O60242 1522 aa9.76□□□□□ -0.85
HDAC1-205ENST00000472928 AHDC1Q5TGY3 1603 aaPredicted RBP9.74□□□□□ -0.85
HDAC1-205ENST00000472928 ABCC5O15440 1437 aa9.74□□□□□ -0.85
HDAC1-205ENST00000472928 ZFYVE9O95405 1425 aa9.74□□□□□ -0.85
HDAC1-205ENST00000472928 CDK12Q9NYV4 1490 aaPredicted RBP9.74□□□□□ -0.85
HDAC1-205ENST00000472928 MEX3CQ5U5Q3 659 aaKnown RBP9.74□□□□□ -0.85
HDAC1-205ENST00000472928 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
HDAC1-205ENST00000472928 RRP7BPQ9NSQ0 103 aa9.74□□□□□ -0.85
HDAC1-205ENST00000472928 RXRBP28702 533 aa9.73□□□□□ -0.85
HDAC1-205ENST00000472928 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-205ENST00000472928 KANK4Q5T7N3 995 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-205ENST00000472928 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-205ENST00000472928 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-205ENST00000472928 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
HDAC1-205ENST00000472928 PLEKHG1Q9ULL1 1385 aa9.73□□□□□ -0.85
HDAC1-205ENST00000472928 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
HDAC1-205ENST00000472928 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
HDAC1-205ENST00000472928 DIP2AQ14689 1571 aa9.72□□□□□ -0.85
HDAC1-205ENST00000472928 KANK1Q14678 1352 aa9.72□□□□□ -0.85
HDAC1-205ENST00000472928 BBXQ8WY36 941 aaPredicted RBP9.71□□□□□ -0.86
HDAC1-205ENST00000472928 BCANQ96GW7 911 aa9.71□□□□□ -0.86
HDAC1-205ENST00000472928 SLC52A1Q9NWF4 448 aa9.71□□□□□ -0.86
HDAC1-205ENST00000472928 CROCC2H7BZ55 1655 aa9.71□□□□□ -0.86
HDAC1-205ENST00000472928 AFF2P51816 1311 aa9.7□□□□□ -0.86
HDAC1-205ENST00000472928 RGS12O14924 1447 aa9.7□□□□□ -0.86
HDAC1-205ENST00000472928 ADAMTS13Q76LX8 1427 aa9.7□□□□□ -0.86
HDAC1-205ENST00000472928 RIMS2Q9UQ26 1411 aa9.7□□□□□ -0.86
HDAC1-205ENST00000472928 DAPK1P53355 1430 aa9.69□□□□□ -0.86
HDAC1-205ENST00000472928 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
HDAC1-205ENST00000472928 BRINP3Q76B58 766 aa9.69□□□□□ -0.86
HDAC1-205ENST00000472928 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
HDAC1-205ENST00000472928 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.69□□□□□ -0.86
HDAC1-205ENST00000472928 TBX22Q9Y458 520 aa9.69□□□□□ -0.86
HDAC1-205ENST00000472928 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-205ENST00000472928 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-205ENST00000472928 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-205ENST00000472928 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
HDAC1-205ENST00000472928 C14orf37Q86TY3 774 aa9.67□□□□□ -0.86
HDAC1-205ENST00000472928 PCGF6Q9BYE7 350 aa9.67□□□□□ -0.86
HDAC1-205ENST00000472928 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms