RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
NUP35-208ENST00000472844 MAP2K5Q13163 448 aa9.14□□□□□ -0.95
NUP35-208ENST00000472844 TTLL12Q14166 644 aaPredicted RBP9.14□□□□□ -0.95
NUP35-208ENST00000472844 MORC4Q8TE76 937 aa9.14□□□□□ -0.95
NUP35-208ENST00000472844 PHF12Q96QT6 1004 aa9.14□□□□□ -0.95
NUP35-208ENST00000472844 GNEQ9Y223 722 aaKnown RBP9.14□□□□□ -0.95
NUP35-208ENST00000472844 FAM50AQ14320 339 aaKnown RBP9.13□□□□□ -0.95
NUP35-208ENST00000472844 NAALADL2Q58DX5 795 aa9.13□□□□□ -0.95
NUP35-208ENST00000472844 ZNF662Q6ZS27 426 aa9.13□□□□□ -0.95
NUP35-208ENST00000472844 METTL14Q9HCE5 456 aaKnown RBP9.13□□□□□ -0.95
NUP35-208ENST00000472844 SLC52A1Q9NWF4 448 aa9.13□□□□□ -0.95
NUP35-208ENST00000472844 LAS1LQ9Y4W2 734 aaKnown RBP9.13□□□□□ -0.95
NUP35-208ENST00000472844 ARHGEF11O15085 1522 aa9.12□□□□□ -0.95
NUP35-208ENST00000472844 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.12□□□□□ -0.95
NUP35-208ENST00000472844 GLMNQ92990 594 aa9.12□□□□□ -0.95
NUP35-208ENST00000472844 BCL2L13Q9BXK5 485 aa9.12□□□□□ -0.95
NUP35-208ENST00000472844 ATP1B4Q9UN42 357 aaPredicted RBP9.12□□□□□ -0.95
NUP35-208ENST00000472844 IRF6O14896 467 aa9.11□□□□□ -0.95
NUP35-208ENST00000472844 MCCP23508 829 aa9.11□□□□□ -0.95
NUP35-208ENST00000472844 FOSBP53539 338 aa9.11□□□□□ -0.95
NUP35-208ENST00000472844 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
NUP35-208ENST00000472844 GPR37O15354 613 aa9.1□□□□□ -0.95
NUP35-208ENST00000472844 RALBP1Q15311 655 aa9.1□□□□□ -0.95
NUP35-208ENST00000472844 RFX1P22670 979 aa9.09□□□□□ -0.95
NUP35-208ENST00000472844 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
NUP35-208ENST00000472844 DPH6Q7L8W6 267 aa9.09□□□□□ -0.95
NUP35-208ENST00000472844 TERF2IPQ9NYB0 399 aa9.09□□□□□ -0.95
NUP35-208ENST00000472844 MAGEC2Q9UBF1 373 aaPredicted RBP9.09□□□□□ -0.95
NUP35-208ENST00000472844 AAMPQ13685 434 aa9.08□□□□□ -0.96
NUP35-208ENST00000472844 NOP9Q86U38 636 aaKnown RBP9.08□□□□□ -0.96
NUP35-208ENST00000472844 CNPY4Q8N129 248 aa9.08□□□□□ -0.96
NUP35-208ENST00000472844 TMTC2Q8N394 836 aa9.08□□□□□ -0.96
NUP35-208ENST00000472844 UBA5Q9GZZ9 404 aa9.08□□□□□ -0.96
NUP35-208ENST00000472844 MS4A1P11836 297 aa9.07□□□□□ -0.96
NUP35-208ENST00000472844 DNAJC14Q6Y2X3 702 aaPredicted RBP9.07□□□□□ -0.96
NUP35-208ENST00000472844 APBB1IPQ7Z5R6 666 aaPredicted RBP9.07□□□□□ -0.96
NUP35-208ENST00000472844 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
NUP35-208ENST00000472844 CCER1Q8TC90 406 aaPredicted RBP9.07□□□□□ -0.96
NUP35-208ENST00000472844 GIPC2Q8TF65 315 aa9.07□□□□□ -0.96
NUP35-208ENST00000472844 LARP6Q9BRS8 491 aaKnown RBP9.07□□□□□ -0.96
NUP35-208ENST00000472844 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
NUP35-208ENST00000472844 B4GALNT3Q6L9W6 998 aa9.06□□□□□ -0.96
NUP35-208ENST00000472844 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
NUP35-208ENST00000472844 BANK1Q8NDB2 785 aa9.06□□□□□ -0.96
NUP35-208ENST00000472844 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
NUP35-208ENST00000472844 RTL5Q5HYW3 569 aaPredicted RBP9.05□□□□□ -0.96
NUP35-208ENST00000472844 OXER1Q8TDS5 423 aa9.05□□□□□ -0.96
NUP35-208ENST00000472844 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
NUP35-208ENST00000472844 VAMP1P23763 118 aa9.04□□□□□ -0.96
NUP35-208ENST00000472844 PDE4AP27815 886 aa9.04□□□□□ -0.96
NUP35-208ENST00000472844 IGBP1P78318 339 aa9.04□□□□□ -0.96
NUP35-208ENST00000472844 SMC5Q8IY18 1101 aa9.04□□□□□ -0.96
NUP35-208ENST00000472844 SGSM3Q96HU1 749 aa9.04□□□□□ -0.96
NUP35-208ENST00000472844 SNRKQ9NRH2 765 aa9.04□□□□□ -0.96
NUP35-208ENST00000472844 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.04□□□□□ -0.96
NUP35-208ENST00000472844 POM121CA8CG34 1229 aa9.03□□□□□ -0.96
NUP35-208ENST00000472844 PEX14O75381 377 aa9.03□□□□□ -0.96
NUP35-208ENST00000472844 SRPK2P78362 688 aaKnown RBP9.03□□□□□ -0.96
NUP35-208ENST00000472844 MFSD10Q14728 455 aa9.03□□□□□ -0.96
NUP35-208ENST00000472844 MFRPQ9BY79 579 aa9.03□□□□□ -0.96
NUP35-208ENST00000472844 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
NUP35-208ENST00000472844 GDPD2Q9HCC8 539 aa9.03□□□□□ -0.96
NUP35-208ENST00000472844 SBNO2Q9Y2G9 1366 aa9.02□□□□□ -0.97
NUP35-208ENST00000472844 MAP4K4O95819 1239 aaPredicted RBP9.02□□□□□ -0.97
NUP35-208ENST00000472844 FOXD4L6Q3SYB3 417 aaPredicted RBP9.02□□□□□ -0.97
NUP35-208ENST00000472844 FOXD4L3Q6VB84 417 aaPredicted RBP9.02□□□□□ -0.97
NUP35-208ENST00000472844 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
NUP35-208ENST00000472844 CCDC61Q9Y6R9 512 aa9.02□□□□□ -0.97
NUP35-208ENST00000472844 NCKAP5LQ9HCH0 1330 aa9.02□□□□□ -0.97
NUP35-208ENST00000472844 NCAPD3P42695 1498 aa9.02□□□□□ -0.97
NUP35-208ENST00000472844 hCG_2014768A0A024R1R8 64 aa9.01□□□□□ -0.97
NUP35-208ENST00000472844 PPP1R37O75864 691 aa9.01□□□□□ -0.97
NUP35-208ENST00000472844 NEFMP07197 916 aa9.01□□□□□ -0.97
NUP35-208ENST00000472844 POTEJP0CG39 1038 aa9.01□□□□□ -0.97
NUP35-208ENST00000472844 CAMK2BQ13554 666 aa9.01□□□□□ -0.97
NUP35-208ENST00000472844 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
NUP35-208ENST00000472844 KLHL42Q9P2K6 505 aa9.01□□□□□ -0.97
NUP35-208ENST00000472844 LAMC3Q9Y6N6 1575 aa9□□□□□ -0.97
NUP35-208ENST00000472844 TMEM88BA6NKF7 163 aa9□□□□□ -0.97
NUP35-208ENST00000472844 SOX12O15370 315 aa9□□□□□ -0.97
NUP35-208ENST00000472844 EIF3JO75822 258 aaKnown RBP9□□□□□ -0.97
NUP35-208ENST00000472844 CFAP70Q5T0N1 1121 aa9□□□□□ -0.97
NUP35-208ENST00000472844 PROCA1Q8NCQ7 364 aaPredicted RBP9□□□□□ -0.97
NUP35-208ENST00000472844 ABL2P42684 1182 aa8.99□□□□□ -0.97
NUP35-208ENST00000472844 HSP90AB2PQ58FF8 381 aa8.99□□□□□ -0.97
NUP35-208ENST00000472844 FAM163AQ96GL9 167 aaPredicted RBP8.99□□□□□ -0.97
NUP35-208ENST00000472844 DDX27Q96GQ7 796 aaKnown RBP8.99□□□□□ -0.97
NUP35-208ENST00000472844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.99□□□□□ -0.97
NUP35-208ENST00000472844 ARAP1Q96P48 1450 aa8.98□□□□□ -0.97
NUP35-208ENST00000472844 TLDC2A0PJX2 215 aa8.98□□□□□ -0.97
NUP35-208ENST00000472844 PTPROQ16827 1216 aa8.98□□□□□ -0.97
NUP35-208ENST00000472844 ZNF467Q7Z7K2 595 aaPredicted RBP8.98□□□□□ -0.97
NUP35-208ENST00000472844 LARGE2Q8N3Y3 721 aa8.98□□□□□ -0.97
NUP35-208ENST00000472844 NME8Q8N427 588 aa8.98□□□□□ -0.97
NUP35-208ENST00000472844 GPATCH3Q96I76 525 aa8.98□□□□□ -0.97
NUP35-208ENST00000472844 PRM3Q9NNZ6 103 aa8.98□□□□□ -0.97
NUP35-208ENST00000472844 IBSPP21815 317 aaPredicted RBP8.97□□□□□ -0.97
NUP35-208ENST00000472844 LONRF3Q496Y0 759 aa8.97□□□□□ -0.97
NUP35-208ENST00000472844 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
NUP35-208ENST00000472844 MAMSTRQ6ZN01 415 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms