RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 IPO9Q96P70 1041 aaKnown RBP8.38□□□□□ -1.07
BRCA1-210ENST00000471181 CPLX2Q6PUV4 134 aaKnown RBP8.38□□□□□ -1.07
BRCA1-210ENST00000471181 VPS37DQ86XT2 251 aa8.38□□□□□ -1.07
BRCA1-210ENST00000471181 NGEFQ8N5V2 710 aa8.38□□□□□ -1.07
BRCA1-210ENST00000471181 CHMP4CQ96CF2 233 aa8.38□□□□□ -1.07
BRCA1-210ENST00000471181 CHMP4AQ9BY43 222 aa8.38□□□□□ -1.07
BRCA1-210ENST00000471181 MTMR7Q9Y216 660 aa8.38□□□□□ -1.07
BRCA1-210ENST00000471181 KANK1Q14678 1352 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 KTN1Q86UP2 1357 aaKnown RBP8.37□□□□□ -1.07
BRCA1-210ENST00000471181 AXDND1Q5T1B0 1012 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-210ENST00000471181 SIN3AQ96ST3 1273 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 DIAPH3Q9NSV4 1193 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 FYB1O15117 783 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 SASS6Q6UVJ0 657 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 ERCC4Q92889 916 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-210ENST00000471181 NCAPD3P42695 1498 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-210ENST00000471181 ANKRD18AQ8IVF6 992 aa8.37□□□□□ -1.07
BRCA1-210ENST00000471181 BCCIPQ9P287 314 aaKnown RBP eCLIP8.37□□□□□ -1.07
BRCA1-210ENST00000471181 ERICH2A1L162 156 aa8.36□□□□□ -1.07
BRCA1-210ENST00000471181 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
BRCA1-210ENST00000471181 ATAD2BQ9ULI0 1458 aa8.36□□□□□ -1.07
BRCA1-210ENST00000471181 CLASRPQ8N2M8 674 aaKnown RBP8.36□□□□□ -1.07
BRCA1-210ENST00000471181 LMOD3Q0VAK6 560 aa8.36□□□□□ -1.07
BRCA1-210ENST00000471181 DYDC1Q8WWB3 177 aa8.36□□□□□ -1.07
BRCA1-210ENST00000471181 HMGN5P82970 282 aaKnown RBP8.35□□□□□ -1.07
BRCA1-210ENST00000471181 SYCP1Q15431 976 aa8.35□□□□□ -1.07
BRCA1-210ENST00000471181 LEKR1Q6ZMV7 388 aa8.35□□□□□ -1.07
BRCA1-210ENST00000471181 OLFM4Q6UX06 510 aa8.35□□□□□ -1.07
BRCA1-210ENST00000471181 TAX1BP1Q86VP1 789 aa8.35□□□□□ -1.07
BRCA1-210ENST00000471181 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
BRCA1-210ENST00000471181 AMPHP49418 695 aa8.34□□□□□ -1.07
BRCA1-210ENST00000471181 IKQ13123 557 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-210ENST00000471181 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-210ENST00000471181 ANKRD45Q5TZF3 282 aa8.34□□□□□ -1.07
BRCA1-210ENST00000471181 VPS37CA5D8V6 355 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-210ENST00000471181 EZRP15311 586 aaKnown RBP8.34□□□□□ -1.07
BRCA1-210ENST00000471181 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-210ENST00000471181 TRDNQ13061 729 aa8.34□□□□□ -1.07
BRCA1-210ENST00000471181 LRRFIP1Q32MZ4 808 aaKnown RBP8.33□□□□□ -1.08
BRCA1-210ENST00000471181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.33□□□□□ -1.08
BRCA1-210ENST00000471181 GOLGA6L7A0A1B0GV03 622 aa8.33□□□□□ -1.08
BRCA1-210ENST00000471181 KIAA0754O94854 1291 aa8.33□□□□□ -1.08
BRCA1-210ENST00000471181 NF2P35240 595 aa8.33□□□□□ -1.08
BRCA1-210ENST00000471181 NEBLO76041 1014 aa8.33□□□□□ -1.08
BRCA1-210ENST00000471181 ERLIN2O94905 339 aa8.33□□□□□ -1.08
BRCA1-210ENST00000471181 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
BRCA1-210ENST00000471181 CENPJQ9HC77 1338 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-210ENST00000471181 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
BRCA1-210ENST00000471181 EVA1CP58658 441 aa8.32□□□□□ -1.08
BRCA1-210ENST00000471181 GOLGA6L10A6NI86 522 aa8.32□□□□□ -1.08
BRCA1-210ENST00000471181 GSE1Q14687 1217 aa8.32□□□□□ -1.08
BRCA1-210ENST00000471181 CCDC73Q6ZRK6 1079 aa8.32□□□□□ -1.08
BRCA1-210ENST00000471181 CENPHQ9H3R5 247 aa8.32□□□□□ -1.08
BRCA1-210ENST00000471181 CCDC66A2RUB6 948 aa8.32□□□□□ -1.08
BRCA1-210ENST00000471181 BRPF1P55201 1214 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-210ENST00000471181 ZKSCAN1P17029 563 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-210ENST00000471181 IBSPP21815 317 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-210ENST00000471181 NGDNQ8NEJ9 315 aaKnown RBP8.31□□□□□ -1.08
BRCA1-210ENST00000471181 PDCL3Q9H2J4 239 aa8.31□□□□□ -1.08
BRCA1-210ENST00000471181 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
BRCA1-210ENST00000471181 GIMAP7Q8NHV1 300 aa8.31□□□□□ -1.08
BRCA1-210ENST00000471181 MAPK8IP2Q13387 824 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-210ENST00000471181 RUFY2Q8WXA3 655 aa8.31□□□□□ -1.08
BRCA1-210ENST00000471181 RBM33Q96EV2 1170 aaKnown RBP8.31□□□□□ -1.08
BRCA1-210ENST00000471181 BRMS1Q9HCU9 246 aa8.31□□□□□ -1.08
BRCA1-210ENST00000471181 DCAF8L1A6NGE4 600 aa8.31□□□□□ -1.08
BRCA1-210ENST00000471181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
BRCA1-210ENST00000471181 PHF23Q9BUL5 403 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-210ENST00000471181 SMC2O95347 1197 aa8.3□□□□□ -1.08
BRCA1-210ENST00000471181 IFIT2P09913 472 aaKnown RBP8.3□□□□□ -1.08
BRCA1-210ENST00000471181 FAM193AP78312 1265 aa8.3□□□□□ -1.08
BRCA1-210ENST00000471181 C1orf141Q5JVX7 400 aa8.3□□□□□ -1.08
BRCA1-210ENST00000471181 GGT6Q6P531 493 aa8.3□□□□□ -1.08
BRCA1-210ENST00000471181 MAGEC2Q9UBF1 373 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-210ENST00000471181 NUTM2FA1L443 756 aa8.3□□□□□ -1.08
BRCA1-210ENST00000471181 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-210ENST00000471181 KRT18P05783 430 aaKnown RBP8.3□□□□□ -1.08
BRCA1-210ENST00000471181 GBP2P32456 591 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-210ENST00000471181 FAM43AQ8N2R8 423 aa8.3□□□□□ -1.08
BRCA1-210ENST00000471181 CDK5RAP3Q96JB5 506 aa8.3□□□□□ -1.08
BRCA1-210ENST00000471181 ELL2O00472 640 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-210ENST00000471181 EIF2S2P20042 333 aaKnown RBP8.29□□□□□ -1.08
BRCA1-210ENST00000471181 SMC3Q9UQE7 1217 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 TAF3Q5VWG9 929 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 CCDC112Q8NEF3 446 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 CEP63Q96MT8 703 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 SMARCE1Q969G3 411 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 NAT10Q9H0A0 1025 aaKnown RBP8.29□□□□□ -1.08
BRCA1-210ENST00000471181 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 CLIP1P30622 1438 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 TTC5Q8N0Z6 440 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
BRCA1-210ENST00000471181 HSP90AB4PQ58FF6 505 aa8.28□□□□□ -1.08
BRCA1-210ENST00000471181 C9orf78Q9NZ63 289 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-210ENST00000471181 RRP7AQ9Y3A4 280 aaKnown RBP8.28□□□□□ -1.08
BRCA1-210ENST00000471181 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
BRCA1-210ENST00000471181 HSPA5P11021 654 aaKnown RBP8.28□□□□□ -1.08
BRCA1-210ENST00000471181 NUTM2DQ5VT03 806 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms