RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 WDR7Q9Y4E6 1490 aa17.22■□□□□ 0.35
SFXN3-205ENST00000470252 ATP10AO60312 1499 aa17.21■□□□□ 0.35
SFXN3-205ENST00000470252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.21■□□□□ 0.35
SFXN3-205ENST00000470252 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
SFXN3-205ENST00000470252 DUOX2Q9NRD8 1548 aa17.2■□□□□ 0.34
SFXN3-205ENST00000470252 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
SFXN3-205ENST00000470252 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
SFXN3-205ENST00000470252 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
SFXN3-205ENST00000470252 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.19■□□□□ 0.34
SFXN3-205ENST00000470252 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
SFXN3-205ENST00000470252 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
SFXN3-205ENST00000470252 FAM161AQ3B820 660 aa17.17■□□□□ 0.34
SFXN3-205ENST00000470252 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
SFXN3-205ENST00000470252 SYNMO15061 1565 aa17.17■□□□□ 0.34
SFXN3-205ENST00000470252 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
SFXN3-205ENST00000470252 NFKBIBQ15653 356 aa17.16■□□□□ 0.34
SFXN3-205ENST00000470252 C8orf34Q49A92 452 aa17.16■□□□□ 0.34
SFXN3-205ENST00000470252 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
SFXN3-205ENST00000470252 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
SFXN3-205ENST00000470252 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
SFXN3-205ENST00000470252 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
SFXN3-205ENST00000470252 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
SFXN3-205ENST00000470252 RGS3P49796 1198 aa17.13■□□□□ 0.33
SFXN3-205ENST00000470252 MYOM1P52179 1685 aa17.13■□□□□ 0.33
SFXN3-205ENST00000470252 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
SFXN3-205ENST00000470252 GSE1Q14687 1217 aa17.12■□□□□ 0.33
SFXN3-205ENST00000470252 CEP152O94986 1710 aa17.12■□□□□ 0.33
SFXN3-205ENST00000470252 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
SFXN3-205ENST00000470252 ANO8Q9HCE9 1232 aaPredicted RBP17.09■□□□□ 0.33
SFXN3-205ENST00000470252 KDM5AP29375 1690 aaKnown RBP17.09■□□□□ 0.33
SFXN3-205ENST00000470252 VIRMAQ69YN4 1812 aaKnown RBP17.09■□□□□ 0.33
SFXN3-205ENST00000470252 NKTRP30414 1462 aaKnown RBP17.09■□□□□ 0.33
SFXN3-205ENST00000470252 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
SFXN3-205ENST00000470252 APAF1O14727 1248 aa17.08■□□□□ 0.33
SFXN3-205ENST00000470252 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.33
SFXN3-205ENST00000470252 ABCC2Q92887 1545 aa17.08■□□□□ 0.32
SFXN3-205ENST00000470252 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
SFXN3-205ENST00000470252 TRPM2O94759 1503 aa17.07■□□□□ 0.32
SFXN3-205ENST00000470252 BCAR3O75815 825 aa17.07■□□□□ 0.32
SFXN3-205ENST00000470252 SCAPERQ9BY12 1400 aa17.07■□□□□ 0.32
SFXN3-205ENST00000470252 CLTCL1P53675 1640 aa17.06■□□□□ 0.32
SFXN3-205ENST00000470252 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
SFXN3-205ENST00000470252 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
SFXN3-205ENST00000470252 BRPF3Q9ULD4 1205 aa17.05■□□□□ 0.32
SFXN3-205ENST00000470252 ABCC1P33527 1531 aa17.04■□□□□ 0.32
SFXN3-205ENST00000470252 PLCH2O75038 1416 aa17.04■□□□□ 0.32
SFXN3-205ENST00000470252 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
SFXN3-205ENST00000470252 E9PSI1 815 aa17.04■□□□□ 0.32
SFXN3-205ENST00000470252 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
SFXN3-205ENST00000470252 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
SFXN3-205ENST00000470252 KIAA1210Q9ULL0 1709 aa17.02■□□□□ 0.31
SFXN3-205ENST00000470252 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
SFXN3-205ENST00000470252 IGHDP01880 384 aa17.01■□□□□ 0.31
SFXN3-205ENST00000470252 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
SFXN3-205ENST00000470252 PTPRTO14522 1441 aa17■□□□□ 0.31
SFXN3-205ENST00000470252 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
SFXN3-205ENST00000470252 TET3O43151 1660 aa16.99■□□□□ 0.31
SFXN3-205ENST00000470252 CGNL1Q0VF96 1302 aa16.98■□□□□ 0.31
SFXN3-205ENST00000470252 CANXP27824 592 aaKnown RBP16.98■□□□□ 0.31
SFXN3-205ENST00000470252 ZCCHC11Q5TAX3 1644 aaKnown RBP16.98■□□□□ 0.31
SFXN3-205ENST00000470252 CENPJQ9HC77 1338 aaPredicted RBP16.97■□□□□ 0.31
SFXN3-205ENST00000470252 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
SFXN3-205ENST00000470252 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
SFXN3-205ENST00000470252 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
SFXN3-205ENST00000470252 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
SFXN3-205ENST00000470252 CARD14Q9BXL6 1004 aa16.96■□□□□ 0.31
SFXN3-205ENST00000470252 PANK1Q8TE04 598 aa16.96■□□□□ 0.3
SFXN3-205ENST00000470252 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.3
SFXN3-205ENST00000470252 COG6Q9Y2V7 657 aa16.96■□□□□ 0.3
SFXN3-205ENST00000470252 ZFYVE16Q7Z3T8 1539 aa16.95■□□□□ 0.3
SFXN3-205ENST00000470252 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
SFXN3-205ENST00000470252 CFAP70Q5T0N1 1121 aa16.95■□□□□ 0.3
SFXN3-205ENST00000470252 AFAP1Q8N556 730 aa16.95■□□□□ 0.3
SFXN3-205ENST00000470252 UBE2Q2Q8WVN8 375 aa16.95■□□□□ 0.3
SFXN3-205ENST00000470252 ABCA6Q8N139 1617 aa16.95■□□□□ 0.3
SFXN3-205ENST00000470252 USP19O94966 1318 aa16.95■□□□□ 0.3
SFXN3-205ENST00000470252 NINLQ9Y2I6 1382 aa16.95■□□□□ 0.3
SFXN3-205ENST00000470252 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
SFXN3-205ENST00000470252 MAP3K4Q9Y6R4 1608 aa16.94■□□□□ 0.3
SFXN3-205ENST00000470252 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
SFXN3-205ENST00000470252 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
SFXN3-205ENST00000470252 KANK1Q14678 1352 aa16.93■□□□□ 0.3
SFXN3-205ENST00000470252 KIF1BO60333 1816 aa16.93■□□□□ 0.3
SFXN3-205ENST00000470252 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
SFXN3-205ENST00000470252 SEC24BO95487 1268 aa16.93■□□□□ 0.3
SFXN3-205ENST00000470252 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
SFXN3-205ENST00000470252 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
SFXN3-205ENST00000470252 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
SFXN3-205ENST00000470252 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
SFXN3-205ENST00000470252 SHPRHQ149N8 1683 aa16.9■□□□□ 0.3
SFXN3-205ENST00000470252 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
SFXN3-205ENST00000470252 UGGT1Q9NYU2 1555 aa16.9■□□□□ 0.3
SFXN3-205ENST00000470252 MYOM2P54296 1465 aa16.9■□□□□ 0.3
SFXN3-205ENST00000470252 BECN1Q14457 450 aa16.9■□□□□ 0.3
SFXN3-205ENST00000470252 UHRF1BP1LA0JNW5 1464 aa16.89■□□□□ 0.29
SFXN3-205ENST00000470252 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.29
SFXN3-205ENST00000470252 RRP7AQ9Y3A4 280 aaKnown RBP16.89■□□□□ 0.29
SFXN3-205ENST00000470252 IFT172Q9UG01 1749 aa16.88■□□□□ 0.29
SFXN3-205ENST00000470252 VWDEQ8N2E2 1590 aa16.88■□□□□ 0.29
SFXN3-205ENST00000470252 KIF3BO15066 747 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms