RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 PIK3C2GO75747 1445 aa9.86□□□□□ -0.83
KDM3A-210ENST00000470160 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
KDM3A-210ENST00000470160 SLC52A1Q9NWF4 448 aa9.85□□□□□ -0.83
KDM3A-210ENST00000470160 WASHC2CQ9Y4E1 1318 aa9.85□□□□□ -0.83
KDM3A-210ENST00000470160 ADGRB1O14514 1584 aa9.85□□□□□ -0.83
KDM3A-210ENST00000470160 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
KDM3A-210ENST00000470160 KIF7Q2M1P5 1343 aa9.85□□□□□ -0.83
KDM3A-210ENST00000470160 MYO5BQ9ULV0 1848 aa9.84□□□□□ -0.83
KDM3A-210ENST00000470160 MYT1LQ9UL68 1186 aa9.84□□□□□ -0.83
KDM3A-210ENST00000470160 SBNO2Q9Y2G9 1366 aa9.84□□□□□ -0.83
KDM3A-210ENST00000470160 EIF5BO60841 1220 aaKnown RBP9.84□□□□□ -0.83
KDM3A-210ENST00000470160 CARD11Q9BXL7 1154 aa9.84□□□□□ -0.83
KDM3A-210ENST00000470160 DDX10Q13206 875 aaKnown RBP9.83□□□□□ -0.84
KDM3A-210ENST00000470160 CFAP65Q6ZU64 1925 aaKnown RBP9.82□□□□□ -0.84
KDM3A-210ENST00000470160 KTN1Q86UP2 1357 aaKnown RBP9.82□□□□□ -0.84
KDM3A-210ENST00000470160 GGT6Q6P531 493 aa9.81□□□□□ -0.84
KDM3A-210ENST00000470160 TESK2Q96S53 571 aa9.81□□□□□ -0.84
KDM3A-210ENST00000470160 SETD1AO15047 1707 aaKnown RBP9.81□□□□□ -0.84
KDM3A-210ENST00000470160 MYOM1P52179 1685 aa9.79□□□□□ -0.84
KDM3A-210ENST00000470160 NBPF1Q3BBV0 1214 aa9.79□□□□□ -0.84
KDM3A-210ENST00000470160 HIRIP3Q9BW71 556 aaPredicted RBP9.79□□□□□ -0.84
KDM3A-210ENST00000470160 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
KDM3A-210ENST00000470160 RGL3Q3MIN7 710 aa9.79□□□□□ -0.84
KDM3A-210ENST00000470160 C14orf93Q9H972 538 aaKnown RBP9.79□□□□□ -0.84
KDM3A-210ENST00000470160 ARHGEF28Q8N1W1 1705 aaKnown RBP9.79□□□□□ -0.84
KDM3A-210ENST00000470160 EIF3AQ14152 1382 aaKnown RBP9.79□□□□□ -0.84
KDM3A-210ENST00000470160 ST20-MTHFSA0A0A6YYL1 179 aa9.78□□□□□ -0.84
KDM3A-210ENST00000470160 ANP32CO43423 234 aa9.78□□□□□ -0.84
KDM3A-210ENST00000470160 PLPPR3Q6T4P5 718 aa9.78□□□□□ -0.84
KDM3A-210ENST00000470160 A2ML1A8K2U0 1454 aa9.77□□□□□ -0.84
KDM3A-210ENST00000470160 UBR1Q8IWV7 1749 aa9.77□□□□□ -0.85
KDM3A-210ENST00000470160 PUS7Q96PZ0 661 aaKnown RBP9.77□□□□□ -0.85
KDM3A-210ENST00000470160 DNAJC5Q9H3Z4 198 aa9.77□□□□□ -0.85
KDM3A-210ENST00000470160 ADGRF5Q8IZF2 1346 aa9.77□□□□□ -0.85
KDM3A-210ENST00000470160 ASXL1Q8IXJ9 1541 aa9.76□□□□□ -0.85
KDM3A-210ENST00000470160 DLC1Q96QB1 1528 aa9.76□□□□□ -0.85
KDM3A-210ENST00000470160 KNDC1Q76NI1 1749 aa9.76□□□□□ -0.85
KDM3A-210ENST00000470160 IDI1Q13907 227 aa9.76□□□□□ -0.85
KDM3A-210ENST00000470160 C3P01024 1663 aa9.76□□□□□ -0.85
KDM3A-210ENST00000470160 QRICH2Q9H0J4 1663 aa9.76□□□□□ -0.85
KDM3A-210ENST00000470160 FER1L4A9Z1Z3 1794 aa9.76□□□□□ -0.85
KDM3A-210ENST00000470160 NLRP1Q9C000 1473 aa9.75□□□□□ -0.85
KDM3A-210ENST00000470160 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
KDM3A-210ENST00000470160 CENPBP07199 599 aaPredicted RBP9.75□□□□□ -0.85
KDM3A-210ENST00000470160 ZMYM3Q14202 1370 aa9.75□□□□□ -0.85
KDM3A-210ENST00000470160 NRXN3Q9Y4C0 1643 aa9.75□□□□□ -0.85
KDM3A-210ENST00000470160 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
KDM3A-210ENST00000470160 PRKRIP1Q9H875 184 aaPredicted RBP9.74□□□□□ -0.85
KDM3A-210ENST00000470160 USP32Q8NFA0 1604 aa9.74□□□□□ -0.85
KDM3A-210ENST00000470160 DISP3Q9P2K9 1392 aa9.74□□□□□ -0.85
KDM3A-210ENST00000470160 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
KDM3A-210ENST00000470160 ALKQ9UM73 1620 aa9.73□□□□□ -0.85
KDM3A-210ENST00000470160 PLEKHG5O94827 1062 aa9.73□□□□□ -0.85
KDM3A-210ENST00000470160 TMF1P82094 1093 aa9.73□□□□□ -0.85
KDM3A-210ENST00000470160 ADAMTSL3P82987 1691 aa9.72□□□□□ -0.85
KDM3A-210ENST00000470160 INSRP06213 1382 aa9.72□□□□□ -0.85
KDM3A-210ENST00000470160 CDCA8Q53HL2 280 aa9.72□□□□□ -0.85
KDM3A-210ENST00000470160 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
KDM3A-210ENST00000470160 SLIT1O75093 1534 aa9.72□□□□□ -0.85
KDM3A-210ENST00000470160 ARHGAP23Q9P227 1491 aa9.71□□□□□ -0.86
KDM3A-210ENST00000470160 CFAP70Q5T0N1 1121 aa9.71□□□□□ -0.86
KDM3A-210ENST00000470160 PARD3Q8TEW0 1356 aa9.7□□□□□ -0.86
KDM3A-210ENST00000470160 ZNF142P52746 1687 aaPredicted RBP9.7□□□□□ -0.86
KDM3A-210ENST00000470160 PTPRMP28827 1452 aa9.7□□□□□ -0.86
KDM3A-210ENST00000470160 TNRQ92752 1358 aa9.7□□□□□ -0.86
KDM3A-210ENST00000470160 TECPR2O15040 1411 aa9.69□□□□□ -0.86
KDM3A-210ENST00000470160 RALBP1Q15311 655 aa9.69□□□□□ -0.86
KDM3A-210ENST00000470160 RIMS2Q9UQ26 1411 aa9.69□□□□□ -0.86
KDM3A-210ENST00000470160 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
KDM3A-210ENST00000470160 MED14O60244 1454 aa9.68□□□□□ -0.86
KDM3A-210ENST00000470160 SIRT1Q96EB6 747 aa9.68□□□□□ -0.86
KDM3A-210ENST00000470160 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.68□□□□□ -0.86
KDM3A-210ENST00000470160 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
KDM3A-210ENST00000470160 CPS1P31327 1500 aa9.67□□□□□ -0.86
KDM3A-210ENST00000470160 TULP4Q9NRJ4 1543 aa9.67□□□□□ -0.86
KDM3A-210ENST00000470160 BRD4O60885 1362 aaPredicted RBP9.67□□□□□ -0.86
KDM3A-210ENST00000470160 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
KDM3A-210ENST00000470160 CENPJQ9HC77 1338 aaPredicted RBP9.66□□□□□ -0.86
KDM3A-210ENST00000470160 NINLQ9Y2I6 1382 aa9.66□□□□□ -0.86
KDM3A-210ENST00000470160 ABCC11Q96J66 1382 aa9.66□□□□□ -0.86
KDM3A-210ENST00000470160 LRPPRCP42704 1394 aaKnown RBP9.65□□□□□ -0.86
KDM3A-210ENST00000470160 TMEM2Q9UHN6 1383 aa9.65□□□□□ -0.86
KDM3A-210ENST00000470160 ADGRB2O60241 1585 aa9.65□□□□□ -0.86
KDM3A-210ENST00000470160 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.86
KDM3A-210ENST00000470160 HDGFP51858 240 aaKnown RBP9.64□□□□□ -0.87
KDM3A-210ENST00000470160 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
KDM3A-210ENST00000470160 MYBBP1AQ9BQG0 1328 aaKnown RBP9.64□□□□□ -0.87
KDM3A-210ENST00000470160 PLEKHG1Q9ULL1 1385 aa9.64□□□□□ -0.87
KDM3A-210ENST00000470160 ANKRD26Q9UPS8 1709 aa9.63□□□□□ -0.87
KDM3A-210ENST00000470160 NCBP3Q53F19 620 aaKnown RBP9.63□□□□□ -0.87
KDM3A-210ENST00000470160 CHGAP10645 457 aaKnown RBP9.62□□□□□ -0.87
KDM3A-210ENST00000470160 ESF1Q9H501 851 aaKnown RBP9.62□□□□□ -0.87
KDM3A-210ENST00000470160 RIMS1Q86UR5 1692 aaKnown RBP9.62□□□□□ -0.87
KDM3A-210ENST00000470160 ADAMTS13Q76LX8 1427 aa9.62□□□□□ -0.87
KDM3A-210ENST00000470160 SETD1BQ9UPS6 1966 aaKnown RBP9.61□□□□□ -0.87
KDM3A-210ENST00000470160 CEP170BQ9Y4F5 1589 aaPredicted RBP9.61□□□□□ -0.87
KDM3A-210ENST00000470160 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
KDM3A-210ENST00000470160 PANK3Q9H999 370 aa9.6□□□□□ -0.87
KDM3A-210ENST00000470160 XRN1Q8IZH2 1706 aaKnown RBP9.6□□□□□ -0.87
KDM3A-210ENST00000470160 NSD2O96028 1365 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms