RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MROH1Q8NDA8 1641 aa18.12■□□□□ 0.49
BRCA1-209ENST00000470026 TCERG1O14776 1098 aaKnown RBP18.12■□□□□ 0.49
BRCA1-209ENST00000470026 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
BRCA1-209ENST00000470026 ASXL1Q8IXJ9 1541 aa18.12■□□□□ 0.49
BRCA1-209ENST00000470026 PIK3C2GO75747 1445 aa18.12■□□□□ 0.49
BRCA1-209ENST00000470026 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
BRCA1-209ENST00000470026 IPO9Q96P70 1041 aaKnown RBP18.11■□□□□ 0.49
BRCA1-209ENST00000470026 MYOM2P54296 1465 aa18.11■□□□□ 0.49
BRCA1-209ENST00000470026 ANP32AP39687 249 aaKnown RBP18.09■□□□□ 0.49
BRCA1-209ENST00000470026 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
BRCA1-209ENST00000470026 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
BRCA1-209ENST00000470026 ZNF521Q96K83 1311 aa18.09■□□□□ 0.49
BRCA1-209ENST00000470026 FANCAO15360 1455 aa18.09■□□□□ 0.49
BRCA1-209ENST00000470026 MS4A1P11836 297 aa18.08■□□□□ 0.49
BRCA1-209ENST00000470026 MAP3K4Q9Y6R4 1608 aa18.08■□□□□ 0.49
BRCA1-209ENST00000470026 EIF3AQ14152 1382 aaKnown RBP18.08■□□□□ 0.49
BRCA1-209ENST00000470026 KANK1Q14678 1352 aa18.08■□□□□ 0.49
BRCA1-209ENST00000470026 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.48
BRCA1-209ENST00000470026 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
BRCA1-209ENST00000470026 IFT172Q9UG01 1749 aa18.08■□□□□ 0.48
BRCA1-209ENST00000470026 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
BRCA1-209ENST00000470026 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
BRCA1-209ENST00000470026 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
BRCA1-209ENST00000470026 NRXN1Q9ULB1 1477 aa18.04■□□□□ 0.48
BRCA1-209ENST00000470026 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
BRCA1-209ENST00000470026 MYO3AQ8NEV4 1616 aa18.04■□□□□ 0.48
BRCA1-209ENST00000470026 LMTK2Q8IWU2 1503 aa18.04■□□□□ 0.48
BRCA1-209ENST00000470026 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
BRCA1-209ENST00000470026 KIF1BO60333 1816 aa18.02■□□□□ 0.48
BRCA1-209ENST00000470026 DUSP27Q5VZP5 1158 aa18.02■□□□□ 0.48
BRCA1-209ENST00000470026 ERVK-7P63135 1459 aa18.02■□□□□ 0.48
BRCA1-209ENST00000470026 BACH2Q9BYV9 841 aa18.02■□□□□ 0.47
BRCA1-209ENST00000470026 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
BRCA1-209ENST00000470026 PLIN1O60240 522 aa18.01■□□□□ 0.47
BRCA1-209ENST00000470026 PDE4AP27815 886 aa18.01■□□□□ 0.47
BRCA1-209ENST00000470026 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
BRCA1-209ENST00000470026 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
BRCA1-209ENST00000470026 SBNO2Q9Y2G9 1366 aa18■□□□□ 0.47
BRCA1-209ENST00000470026 KIDINS220Q9ULH0 1771 aa18■□□□□ 0.47
BRCA1-209ENST00000470026 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
BRCA1-209ENST00000470026 KIF3BO15066 747 aa17.99■□□□□ 0.47
BRCA1-209ENST00000470026 UGGT1Q9NYU2 1555 aa17.99■□□□□ 0.47
BRCA1-209ENST00000470026 TRMT2AQ8IZ69 625 aaKnown RBP17.99■□□□□ 0.47
BRCA1-209ENST00000470026 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
BRCA1-209ENST00000470026 SETBP1Q9Y6X0 1596 aa17.98■□□□□ 0.47
BRCA1-209ENST00000470026 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
BRCA1-209ENST00000470026 KDM2BQ8NHM5 1336 aa17.97■□□□□ 0.47
BRCA1-209ENST00000470026 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
BRCA1-209ENST00000470026 ADGRB3O60242 1522 aa17.96■□□□□ 0.47
BRCA1-209ENST00000470026 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.47
BRCA1-209ENST00000470026 SLFN5Q08AF3 891 aa17.96■□□□□ 0.47
BRCA1-209ENST00000470026 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
BRCA1-209ENST00000470026 C20orf194Q5TEA3 1177 aa17.94■□□□□ 0.46
BRCA1-209ENST00000470026 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
BRCA1-209ENST00000470026 NGEFQ8N5V2 710 aa17.93■□□□□ 0.46
BRCA1-209ENST00000470026 ZNF518AQ6AHZ1 1483 aa17.92■□□□□ 0.46
BRCA1-209ENST00000470026 CARD14Q9BXL6 1004 aa17.92■□□□□ 0.46
BRCA1-209ENST00000470026 ZC3H13Q5T200 1668 aaKnown RBP17.91■□□□□ 0.46
BRCA1-209ENST00000470026 PPLO60437 1756 aa17.9■□□□□ 0.46
BRCA1-209ENST00000470026 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
BRCA1-209ENST00000470026 NKTRP30414 1462 aaKnown RBP17.89■□□□□ 0.45
BRCA1-209ENST00000470026 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.45
BRCA1-209ENST00000470026 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
BRCA1-209ENST00000470026 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
BRCA1-209ENST00000470026 ADGRB1O14514 1584 aa17.88■□□□□ 0.45
BRCA1-209ENST00000470026 FRMPD1Q5SYB0 1578 aa17.88■□□□□ 0.45
BRCA1-209ENST00000470026 NOS1P29475 1434 aa17.87■□□□□ 0.45
BRCA1-209ENST00000470026 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
BRCA1-209ENST00000470026 MLH3Q9UHC1 1453 aa17.87■□□□□ 0.45
BRCA1-209ENST00000470026 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
BRCA1-209ENST00000470026 NPATQ14207 1427 aa17.86■□□□□ 0.45
BRCA1-209ENST00000470026 APAF1O14727 1248 aa17.86■□□□□ 0.45
BRCA1-209ENST00000470026 NBR1Q14596 966 aa17.86■□□□□ 0.45
BRCA1-209ENST00000470026 SHPRHQ149N8 1683 aa17.85■□□□□ 0.45
BRCA1-209ENST00000470026 E9PSI1 815 aa17.85■□□□□ 0.45
BRCA1-209ENST00000470026 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
BRCA1-209ENST00000470026 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
BRCA1-209ENST00000470026 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
BRCA1-209ENST00000470026 POGZQ7Z3K3 1410 aa17.84■□□□□ 0.45
BRCA1-209ENST00000470026 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
BRCA1-209ENST00000470026 C14orf93Q9H972 538 aaKnown RBP17.84■□□□□ 0.45
BRCA1-209ENST00000470026 QRICH2Q9H0J4 1663 aa17.84■□□□□ 0.45
BRCA1-209ENST00000470026 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
BRCA1-209ENST00000470026 SKAP1Q86WV1 359 aa17.82■□□□□ 0.44
BRCA1-209ENST00000470026 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
BRCA1-209ENST00000470026 ABCC3O15438 1527 aa17.8■□□□□ 0.44
BRCA1-209ENST00000470026 NSD3Q9BZ95 1437 aa17.8■□□□□ 0.44
BRCA1-209ENST00000470026 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
BRCA1-209ENST00000470026 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
BRCA1-209ENST00000470026 IQSEC2Q5JU85 1478 aa17.79■□□□□ 0.44
BRCA1-209ENST00000470026 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
BRCA1-209ENST00000470026 PIK3C2BO00750 1634 aa17.79■□□□□ 0.44
BRCA1-209ENST00000470026 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
BRCA1-209ENST00000470026 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
BRCA1-209ENST00000470026 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
BRCA1-209ENST00000470026 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
BRCA1-209ENST00000470026 PDE3AQ14432 1141 aa17.77■□□□□ 0.43
BRCA1-209ENST00000470026 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
BRCA1-209ENST00000470026 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
BRCA1-209ENST00000470026 FAM161AQ3B820 660 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms