RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
COMMD2-202ENST00000469896 NKTRP30414 1462 aaKnown RBP18.38■□□□□ 0.53
COMMD2-202ENST00000469896 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
COMMD2-202ENST00000469896 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
COMMD2-202ENST00000469896 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
COMMD2-202ENST00000469896 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
COMMD2-202ENST00000469896 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
COMMD2-202ENST00000469896 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
COMMD2-202ENST00000469896 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
COMMD2-202ENST00000469896 TMEM2Q9UHN6 1383 aa18.35■□□□□ 0.53
COMMD2-202ENST00000469896 ZBTB22O15209 634 aa18.35■□□□□ 0.53
COMMD2-202ENST00000469896 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.52
COMMD2-202ENST00000469896 AFF2P51816 1311 aa18.32■□□□□ 0.52
COMMD2-202ENST00000469896 TSPY4P0CV99 314 aa18.32■□□□□ 0.52
COMMD2-202ENST00000469896 TSPY10P0CW01 314 aa18.32■□□□□ 0.52
COMMD2-202ENST00000469896 RBM6P78332 1123 aaKnown RBP18.32■□□□□ 0.52
COMMD2-202ENST00000469896 RGS12O14924 1447 aa18.32■□□□□ 0.52
COMMD2-202ENST00000469896 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
COMMD2-202ENST00000469896 SHPRHQ149N8 1683 aa18.29■□□□□ 0.52
COMMD2-202ENST00000469896 CAMSAP2Q08AD1 1489 aa18.28■□□□□ 0.52
COMMD2-202ENST00000469896 NWD1Q149M9 1564 aa18.28■□□□□ 0.52
COMMD2-202ENST00000469896 C14orf37Q86TY3 774 aa18.27■□□□□ 0.52
COMMD2-202ENST00000469896 BCANQ96GW7 911 aa18.27■□□□□ 0.52
COMMD2-202ENST00000469896 NGLY1Q96IV0 654 aa18.27■□□□□ 0.52
COMMD2-202ENST00000469896 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.52
COMMD2-202ENST00000469896 AHDC1Q5TGY3 1603 aaPredicted RBP18.26■□□□□ 0.51
COMMD2-202ENST00000469896 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
COMMD2-202ENST00000469896 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
COMMD2-202ENST00000469896 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
COMMD2-202ENST00000469896 TET3O43151 1660 aa18.24■□□□□ 0.51
COMMD2-202ENST00000469896 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
COMMD2-202ENST00000469896 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
COMMD2-202ENST00000469896 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
COMMD2-202ENST00000469896 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
COMMD2-202ENST00000469896 ATF3P18847 181 aa18.22■□□□□ 0.51
COMMD2-202ENST00000469896 C8orf37Q96NL8 207 aa18.22■□□□□ 0.51
COMMD2-202ENST00000469896 PIK3C2BO00750 1634 aa18.21■□□□□ 0.51
COMMD2-202ENST00000469896 EIF2AK4Q9P2K8 1649 aaKnown RBP18.21■□□□□ 0.51
COMMD2-202ENST00000469896 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
COMMD2-202ENST00000469896 CEP162Q5TB80 1403 aa18.21■□□□□ 0.51
COMMD2-202ENST00000469896 CCDC125Q86Z20 511 aa18.2■□□□□ 0.5
COMMD2-202ENST00000469896 CFAP65Q6ZU64 1925 aaKnown RBP18.19■□□□□ 0.5
COMMD2-202ENST00000469896 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
COMMD2-202ENST00000469896 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
COMMD2-202ENST00000469896 CEP152O94986 1710 aa18.18■□□□□ 0.5
COMMD2-202ENST00000469896 MROH1Q8NDA8 1641 aa18.17■□□□□ 0.5
COMMD2-202ENST00000469896 POLA2Q14181 598 aa18.17■□□□□ 0.5
COMMD2-202ENST00000469896 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
COMMD2-202ENST00000469896 IDI1Q13907 227 aa18.14■□□□□ 0.49
COMMD2-202ENST00000469896 BRINP3Q76B58 766 aa18.14■□□□□ 0.49
COMMD2-202ENST00000469896 LRRC59Q96AG4 307 aaKnown RBP18.14■□□□□ 0.49
COMMD2-202ENST00000469896 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
COMMD2-202ENST00000469896 EP400Q96L91 3159 aa18.11■□□□□ 0.49
COMMD2-202ENST00000469896 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
COMMD2-202ENST00000469896 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
COMMD2-202ENST00000469896 MAST1Q9Y2H9 1570 aa18.1■□□□□ 0.49
COMMD2-202ENST00000469896 KANK1Q14678 1352 aa18.09■□□□□ 0.49
COMMD2-202ENST00000469896 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
COMMD2-202ENST00000469896 TRPC5Q9UL62 973 aaPredicted RBP18.09■□□□□ 0.49
COMMD2-202ENST00000469896 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.49
COMMD2-202ENST00000469896 ADGRB3O60242 1522 aa18.08■□□□□ 0.48
COMMD2-202ENST00000469896 USP21Q9UK80 565 aa18.07■□□□□ 0.48
COMMD2-202ENST00000469896 TBX22Q9Y458 520 aa18.07■□□□□ 0.48
COMMD2-202ENST00000469896 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
COMMD2-202ENST00000469896 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
COMMD2-202ENST00000469896 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
COMMD2-202ENST00000469896 SLC52A1Q9NWF4 448 aa18.06■□□□□ 0.48
COMMD2-202ENST00000469896 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
COMMD2-202ENST00000469896 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
COMMD2-202ENST00000469896 LRP5O75197 1615 aa18.04■□□□□ 0.48
COMMD2-202ENST00000469896 DCCP43146 1447 aa18.04■□□□□ 0.48
COMMD2-202ENST00000469896 ERBINQ96RT1 1412 aa18.02■□□□□ 0.48
COMMD2-202ENST00000469896 PIK3R4Q99570 1358 aa18.01■□□□□ 0.47
COMMD2-202ENST00000469896 KIF15Q9NS87 1388 aa18■□□□□ 0.47
COMMD2-202ENST00000469896 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
COMMD2-202ENST00000469896 BLMP54132 1417 aaPredicted RBP17.99■□□□□ 0.47
COMMD2-202ENST00000469896 NOS1P29475 1434 aa17.98■□□□□ 0.47
COMMD2-202ENST00000469896 RIMS2Q9UQ26 1411 aa17.98■□□□□ 0.47
COMMD2-202ENST00000469896 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
COMMD2-202ENST00000469896 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.98■□□□□ 0.47
COMMD2-202ENST00000469896 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
COMMD2-202ENST00000469896 NHSL1Q5SYE7 1610 aa17.97■□□□□ 0.47
COMMD2-202ENST00000469896 ATRNO75882 1429 aa17.97■□□□□ 0.47
COMMD2-202ENST00000469896 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
COMMD2-202ENST00000469896 MST1RQ04912 1400 aa17.95■□□□□ 0.46
COMMD2-202ENST00000469896 AMOTL2Q9Y2J4 779 aa17.94■□□□□ 0.46
COMMD2-202ENST00000469896 PTCH1Q13635 1447 aa17.94■□□□□ 0.46
COMMD2-202ENST00000469896 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
COMMD2-202ENST00000469896 MYOM3Q5VTT5 1437 aa17.92■□□□□ 0.46
COMMD2-202ENST00000469896 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
COMMD2-202ENST00000469896 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
COMMD2-202ENST00000469896 ADAMTS13Q76LX8 1427 aa17.91■□□□□ 0.46
COMMD2-202ENST00000469896 YY1P25490 414 aa17.91■□□□□ 0.46
COMMD2-202ENST00000469896 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
COMMD2-202ENST00000469896 TRPM2O94759 1503 aa17.89■□□□□ 0.45
COMMD2-202ENST00000469896 HRCP23327 699 aa17.88■□□□□ 0.45
COMMD2-202ENST00000469896 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
COMMD2-202ENST00000469896 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
COMMD2-202ENST00000469896 CHGAP10645 457 aaKnown RBP17.86■□□□□ 0.45
COMMD2-202ENST00000469896 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms