RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 MYO5BQ9ULV0 1848 aa12.4□□□□□ -0.42
GAPVD1-213ENST00000469498 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
GAPVD1-213ENST00000469498 HRCP23327 699 aa12.4□□□□□ -0.42
GAPVD1-213ENST00000469498 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
GAPVD1-213ENST00000469498 KIF1BO60333 1816 aa12.39□□□□□ -0.43
GAPVD1-213ENST00000469498 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
GAPVD1-213ENST00000469498 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-213ENST00000469498 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-213ENST00000469498 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
GAPVD1-213ENST00000469498 MPHOSPH9Q99550 1183 aa12.37□□□□□ -0.43
GAPVD1-213ENST00000469498 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
GAPVD1-213ENST00000469498 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
GAPVD1-213ENST00000469498 SYNMO15061 1565 aa12.36□□□□□ -0.43
GAPVD1-213ENST00000469498 CNTLNQ9NXG0 1405 aa12.36□□□□□ -0.43
GAPVD1-213ENST00000469498 TRPM2O94759 1503 aa12.35□□□□□ -0.43
GAPVD1-213ENST00000469498 NPATQ14207 1427 aa12.35□□□□□ -0.43
GAPVD1-213ENST00000469498 RPRD2Q5VT52 1461 aaKnown RBP12.34□□□□□ -0.43
GAPVD1-213ENST00000469498 PIK3C2BO00750 1634 aa12.34□□□□□ -0.43
GAPVD1-213ENST00000469498 PKD2Q13563 968 aa12.34□□□□□ -0.43
GAPVD1-213ENST00000469498 ESF1Q9H501 851 aaKnown RBP12.34□□□□□ -0.43
GAPVD1-213ENST00000469498 UGGT1Q9NYU2 1555 aa12.34□□□□□ -0.43
GAPVD1-213ENST00000469498 MYO3AQ8NEV4 1616 aa12.33□□□□□ -0.43
GAPVD1-213ENST00000469498 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
GAPVD1-213ENST00000469498 SPATA31D1Q6ZQQ2 1576 aa12.33□□□□□ -0.44
GAPVD1-213ENST00000469498 ERVK-7P63135 1459 aa12.33□□□□□ -0.44
GAPVD1-213ENST00000469498 ARHGAP31Q2M1Z3 1444 aa12.32□□□□□ -0.44
GAPVD1-213ENST00000469498 ZNF142P52746 1687 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-213ENST00000469498 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
GAPVD1-213ENST00000469498 IFT172Q9UG01 1749 aa12.29□□□□□ -0.44
GAPVD1-213ENST00000469498 ZMYM3Q14202 1370 aa12.29□□□□□ -0.44
GAPVD1-213ENST00000469498 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-213ENST00000469498 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
GAPVD1-213ENST00000469498 PTPRMP28827 1452 aa12.28□□□□□ -0.44
GAPVD1-213ENST00000469498 ANKRD30BQ9BXX2 1392 aa12.28□□□□□ -0.44
GAPVD1-213ENST00000469498 PTPRTO14522 1441 aa12.28□□□□□ -0.44
GAPVD1-213ENST00000469498 NOS1P29475 1434 aa12.28□□□□□ -0.44
GAPVD1-213ENST00000469498 PPLO60437 1756 aa12.27□□□□□ -0.45
GAPVD1-213ENST00000469498 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
GAPVD1-213ENST00000469498 CCDC144AA2RUR9 1427 aa12.26□□□□□ -0.45
GAPVD1-213ENST00000469498 ADGRB3O60242 1522 aa12.26□□□□□ -0.45
GAPVD1-213ENST00000469498 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
GAPVD1-213ENST00000469498 CEBPAP49715 358 aaPredicted RBP12.25□□□□□ -0.45
GAPVD1-213ENST00000469498 FBXO31Q5XUX0 539 aaPredicted RBP12.25□□□□□ -0.45
GAPVD1-213ENST00000469498 PROM2Q8N271 834 aa12.25□□□□□ -0.45
GAPVD1-213ENST00000469498 TNRQ92752 1358 aa12.24□□□□□ -0.45
GAPVD1-213ENST00000469498 FARP1Q9Y4F1 1045 aaPredicted RBP12.24□□□□□ -0.45
GAPVD1-213ENST00000469498 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
GAPVD1-213ENST00000469498 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
GAPVD1-213ENST00000469498 CLSPNQ9HAW4 1339 aa12.22□□□□□ -0.45
GAPVD1-213ENST00000469498 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-213ENST00000469498 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
GAPVD1-213ENST00000469498 POTEMA6NI47 508 aa12.21□□□□□ -0.45
GAPVD1-213ENST00000469498 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
GAPVD1-213ENST00000469498 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.46
GAPVD1-213ENST00000469498 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
GAPVD1-213ENST00000469498 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
GAPVD1-213ENST00000469498 NEXMIFQ5QGS0 1516 aa12.17□□□□□ -0.46
GAPVD1-213ENST00000469498 A2ML1A8K2U0 1454 aa12.17□□□□□ -0.46
GAPVD1-213ENST00000469498 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
GAPVD1-213ENST00000469498 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
GAPVD1-213ENST00000469498 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-213ENST00000469498 UHRF1BP1Q6BDS2 1440 aa12.15□□□□□ -0.46
GAPVD1-213ENST00000469498 IDI1Q13907 227 aa12.15□□□□□ -0.46
GAPVD1-213ENST00000469498 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
GAPVD1-213ENST00000469498 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-213ENST00000469498 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
GAPVD1-213ENST00000469498 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
GAPVD1-213ENST00000469498 SLC52A1Q9NWF4 448 aa12.14□□□□□ -0.47
GAPVD1-213ENST00000469498 TRPM1Q7Z4N2 1603 aa12.13□□□□□ -0.47
GAPVD1-213ENST00000469498 LAMC1P11047 1609 aa12.12□□□□□ -0.47
GAPVD1-213ENST00000469498 RGL3Q3MIN7 710 aa12.12□□□□□ -0.47
GAPVD1-213ENST00000469498 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
GAPVD1-213ENST00000469498 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-213ENST00000469498 KIAA1210Q9ULL0 1709 aa12.11□□□□□ -0.47
GAPVD1-213ENST00000469498 MYOM2P54296 1465 aa12.11□□□□□ -0.47
GAPVD1-213ENST00000469498 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-213ENST00000469498 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
GAPVD1-213ENST00000469498 SLIT1O75093 1534 aa12.11□□□□□ -0.47
GAPVD1-213ENST00000469498 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
GAPVD1-213ENST00000469498 RIMS2Q9UQ26 1411 aa12.1□□□□□ -0.47
GAPVD1-213ENST00000469498 ARHGAP23Q9P227 1491 aa12.09□□□□□ -0.47
GAPVD1-213ENST00000469498 L3MBTL2Q969R5 705 aa12.09□□□□□ -0.47
GAPVD1-213ENST00000469498 STRCQ7RTU9 1775 aa12.09□□□□□ -0.47
GAPVD1-213ENST00000469498 ZFYVE9O95405 1425 aa12.09□□□□□ -0.47
GAPVD1-213ENST00000469498 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
GAPVD1-213ENST00000469498 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-213ENST00000469498 DCAF11Q8TEB1 546 aa12.07□□□□□ -0.48
GAPVD1-213ENST00000469498 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
GAPVD1-213ENST00000469498 TMEM2Q9UHN6 1383 aa12.06□□□□□ -0.48
GAPVD1-213ENST00000469498 PRAG1Q86YV5 1406 aa12.06□□□□□ -0.48
GAPVD1-213ENST00000469498 SCAF11Q99590 1463 aaKnown RBP12.06□□□□□ -0.48
GAPVD1-213ENST00000469498 NRXN1Q9ULB1 1477 aa12.06□□□□□ -0.48
GAPVD1-213ENST00000469498 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
GAPVD1-213ENST00000469498 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
GAPVD1-213ENST00000469498 RPGRIP1LQ68CZ1 1315 aa12.04□□□□□ -0.48
GAPVD1-213ENST00000469498 ALKQ9UM73 1620 aa12.04□□□□□ -0.48
GAPVD1-213ENST00000469498 PIK3C2GO75747 1445 aa12.03□□□□□ -0.48
GAPVD1-213ENST00000469498 RALGAPBQ86X10 1494 aa12.03□□□□□ -0.48
GAPVD1-213ENST00000469498 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
GAPVD1-213ENST00000469498 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms