RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 GFRA3O60609 400 aa10.58□□□□□ -0.72
SCFD1-205ENST00000469043 ZPR1O75312 459 aa10.58□□□□□ -0.72
SCFD1-205ENST00000469043 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
SCFD1-205ENST00000469043 SMYD5Q6GMV2 418 aa10.57□□□□□ -0.72
SCFD1-205ENST00000469043 RCCD1A6NED2 376 aa10.56□□□□□ -0.72
SCFD1-205ENST00000469043 KMT5BQ4FZB7 885 aa10.56□□□□□ -0.72
SCFD1-205ENST00000469043 TMUB1Q9BVT8 246 aa10.56□□□□□ -0.72
SCFD1-205ENST00000469043 OATP04181 439 aa10.55□□□□□ -0.72
SCFD1-205ENST00000469043 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
SCFD1-205ENST00000469043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.54□□□□□ -0.72
SCFD1-205ENST00000469043 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
SCFD1-205ENST00000469043 HIC1Q14526 733 aa10.52□□□□□ -0.73
SCFD1-205ENST00000469043 BLOC1S3Q6QNY0 202 aa10.52□□□□□ -0.73
SCFD1-205ENST00000469043 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
SCFD1-205ENST00000469043 RSPH4AQ5TD94 716 aa10.51□□□□□ -0.73
SCFD1-205ENST00000469043 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-205ENST00000469043 NRG2O14511 850 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-205ENST00000469043 CFHP08603 1231 aa10.49□□□□□ -0.73
SCFD1-205ENST00000469043 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
SCFD1-205ENST00000469043 TRAF7Q6Q0C0 670 aa10.48□□□□□ -0.73
SCFD1-205ENST00000469043 RBM26Q5T8P6 1007 aaKnown RBP10.47□□□□□ -0.73
SCFD1-205ENST00000469043 SLC24A1O60721 1099 aa10.46□□□□□ -0.73
SCFD1-205ENST00000469043 NR1I2O75469 434 aa10.46□□□□□ -0.73
SCFD1-205ENST00000469043 SLC10A3P09131 477 aa10.45□□□□□ -0.74
SCFD1-205ENST00000469043 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
SCFD1-205ENST00000469043 RNF223E7ERA6 249 aa10.44□□□□□ -0.74
SCFD1-205ENST00000469043 GNPATO15228 680 aa10.44□□□□□ -0.74
SCFD1-205ENST00000469043 METTL3Q86U44 580 aaKnown RBP10.44□□□□□ -0.74
SCFD1-205ENST00000469043 SLC19A1P41440 591 aa10.43□□□□□ -0.74
SCFD1-205ENST00000469043 TLL1O43897 1013 aa10.42□□□□□ -0.74
SCFD1-205ENST00000469043 HAP1P54257 671 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-205ENST00000469043 ANKLE1Q8NAG6 615 aa10.42□□□□□ -0.74
SCFD1-205ENST00000469043 ADH1BP00325 375 aa10.4□□□□□ -0.74
SCFD1-205ENST00000469043 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
SCFD1-205ENST00000469043 S1PR4O95977 384 aa10.39□□□□□ -0.75
SCFD1-205ENST00000469043 FECHP22830 423 aa10.39□□□□□ -0.75
SCFD1-205ENST00000469043 SCUBE3Q8IX30 993 aa10.39□□□□□ -0.75
SCFD1-205ENST00000469043 RDH13Q8NBN7 331 aa10.38□□□□□ -0.75
SCFD1-205ENST00000469043 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-205ENST00000469043 SLC6A16Q9GZN6 736 aa10.37□□□□□ -0.75
SCFD1-205ENST00000469043 SPRYD7Q5W111 196 aa10.36□□□□□ -0.75
SCFD1-205ENST00000469043 ZNF598Q86UK7 904 aaKnown RBP10.36□□□□□ -0.75
SCFD1-205ENST00000469043 LCE2BO14633 110 aa10.35□□□□□ -0.75
SCFD1-205ENST00000469043 PUS10Q3MIT2 529 aaKnown RBP10.35□□□□□ -0.75
SCFD1-205ENST00000469043 DDX11L8A8MPP1 907 aa10.34□□□□□ -0.75
SCFD1-205ENST00000469043 GPR37O15354 613 aa10.34□□□□□ -0.75
SCFD1-205ENST00000469043 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
SCFD1-205ENST00000469043 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
SCFD1-205ENST00000469043 SPSB2Q99619 263 aa10.34□□□□□ -0.75
SCFD1-205ENST00000469043 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
SCFD1-205ENST00000469043 EMID1Q96A84 441 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-205ENST00000469043 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-205ENST00000469043 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
SCFD1-205ENST00000469043 ZNF697Q5TEC3 545 aa10.31□□□□□ -0.76
SCFD1-205ENST00000469043 PRR20EP86478 221 aa10.3□□□□□ -0.76
SCFD1-205ENST00000469043 PRR20CP86479 221 aa10.3□□□□□ -0.76
SCFD1-205ENST00000469043 PRR20DP86480 221 aa10.3□□□□□ -0.76
SCFD1-205ENST00000469043 PRR20BP86481 221 aa10.3□□□□□ -0.76
SCFD1-205ENST00000469043 PRR20AP86496 221 aa10.3□□□□□ -0.76
SCFD1-205ENST00000469043 TRIM67Q6ZTA4 783 aa10.3□□□□□ -0.76
SCFD1-205ENST00000469043 GCGRP47871 477 aa10.29□□□□□ -0.76
SCFD1-205ENST00000469043 FUT2Q10981 343 aa10.29□□□□□ -0.76
SCFD1-205ENST00000469043 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
SCFD1-205ENST00000469043 MORN1Q5T089 497 aa10.29□□□□□ -0.76
SCFD1-205ENST00000469043 NLRP7Q8WX94 980 aa10.29□□□□□ -0.76
SCFD1-205ENST00000469043 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
SCFD1-205ENST00000469043 ZNF787Q6DD87 383 aa10.28□□□□□ -0.76
SCFD1-205ENST00000469043 DGAT1O75907 488 aa10.27□□□□□ -0.77
SCFD1-205ENST00000469043 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
SCFD1-205ENST00000469043 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.77
SCFD1-205ENST00000469043 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
SCFD1-205ENST00000469043 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
SCFD1-205ENST00000469043 GDF9O60383 454 aa10.24□□□□□ -0.77
SCFD1-205ENST00000469043 SALL2Q9Y467 1007 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-205ENST00000469043 PLA2G2CQ5R387 149 aa10.23□□□□□ -0.77
SCFD1-205ENST00000469043 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
SCFD1-205ENST00000469043 THAP11Q96EK4 314 aa10.23□□□□□ -0.77
SCFD1-205ENST00000469043 TNFRSF10AO00220 468 aa10.22□□□□□ -0.77
SCFD1-205ENST00000469043 CD2BP2O95400 341 aaKnown RBP10.22□□□□□ -0.77
SCFD1-205ENST00000469043 RPIAP49247 311 aa10.22□□□□□ -0.77
SCFD1-205ENST00000469043 FAM187AA6NFU0 413 aa10.21□□□□□ -0.77
SCFD1-205ENST00000469043 MAP2K5Q13163 448 aa10.21□□□□□ -0.77
SCFD1-205ENST00000469043 LMOD2Q6P5Q4 547 aa10.21□□□□□ -0.77
SCFD1-205ENST00000469043 BRICD5Q6PL45 260 aa10.21□□□□□ -0.77
SCFD1-205ENST00000469043 MYT1Q01538 1121 aa10.2□□□□□ -0.78
SCFD1-205ENST00000469043 FAM160A2Q8N612 972 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-205ENST00000469043 FCF1Q9Y324 198 aaKnown RBP10.2□□□□□ -0.78
SCFD1-205ENST00000469043 FOXC1Q12948 553 aa10.19□□□□□ -0.78
SCFD1-205ENST00000469043 Q3C1V9 767 aa10.19□□□□□ -0.78
SCFD1-205ENST00000469043 IRF6O14896 467 aa10.18□□□□□ -0.78
SCFD1-205ENST00000469043 ZBTB24O43167 697 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-205ENST00000469043 MINK1Q8N4C8 1332 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-205ENST00000469043 CD46P15529 392 aa10.16□□□□□ -0.78
SCFD1-205ENST00000469043 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
SCFD1-205ENST00000469043 PKD2L1Q9P0L9 805 aa10.16□□□□□ -0.78
SCFD1-205ENST00000469043 KDM4AO75164 1064 aa10.15□□□□□ -0.78
SCFD1-205ENST00000469043 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
SCFD1-205ENST00000469043 MDM2Q00987 491 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-205ENST00000469043 PRDM9Q9NQV7 894 aa10.13□□□□□ -0.79
SCFD1-205ENST00000469043 USP46P62068 366 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms