RNA–Protein interactions for RNA: ENST00000468789.5

MECOM-208, Transcript of MDS1 and EVI1 complex locus, human

APPRIS P3 TSL 2 BASIC

Gene MECOM, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECOM-208	ENST00000468789	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.3	□□□□□ -0.76
MECOM-208	ENST00000468789	SSFA2	P28290	1259 aa		10.3	□□□□□ -0.76
MECOM-208	ENST00000468789	ISY1	Q9ULR0	285 aa	Known RBP	10.3	□□□□□ -0.76
MECOM-208	ENST00000468789	TMF1	P82094	1093 aa		10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	MCTP1	Q6DN14	999 aa		10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	CHMP4B	Q9H444	224 aa	Known RBP	10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	EIF3A	Q14152	1382 aa	Known RBP	10.29	□□□□□ -0.76
MECOM-208	ENST00000468789		E9PSI1	815 aa		10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	RLBP1	P12271	317 aa		10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	VGLL3	A8MV65	326 aa		10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	RAD54L2	Q9Y4B4	1467 aa		10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.29	□□□□□ -0.76
MECOM-208	ENST00000468789	TULP1	O00294	542 aa	Predicted RBP	10.28	□□□□□ -0.76
MECOM-208	ENST00000468789	EFCAB5	A4FU69	1503 aa		10.28	□□□□□ -0.76
MECOM-208	ENST00000468789	PDE3A	Q14432	1141 aa		10.28	□□□□□ -0.76
MECOM-208	ENST00000468789	SPDYE4	A6NLX3	237 aa		10.27	□□□□□ -0.76
MECOM-208	ENST00000468789	SNAPC4	Q5SXM2	1469 aa		10.27	□□□□□ -0.77
MECOM-208	ENST00000468789	PLCD3	Q8N3E9	789 aa		10.27	□□□□□ -0.77
MECOM-208	ENST00000468789	RBM42	Q9BTD8	480 aa	Known RBP	10.27	□□□□□ -0.77
MECOM-208	ENST00000468789	BLM	P54132	1417 aa	Predicted RBP	10.27	□□□□□ -0.77
MECOM-208	ENST00000468789	DISP3	Q9P2K9	1392 aa		10.26	□□□□□ -0.77
MECOM-208	ENST00000468789	KIAA1107	Q9UPP5	1409 aa		10.26	□□□□□ -0.77
MECOM-208	ENST00000468789	ZMYM4	Q5VZL5	1548 aa		10.26	□□□□□ -0.77
MECOM-208	ENST00000468789	DAPK1	P53355	1430 aa		10.26	□□□□□ -0.77
MECOM-208	ENST00000468789	LNPK	Q9C0E8	428 aa		10.25	□□□□□ -0.77
MECOM-208	ENST00000468789	PLCB2	Q00722	1185 aa		10.25	□□□□□ -0.77
MECOM-208	ENST00000468789	RBM27	Q9P2N5	1060 aa	Known RBP	10.25	□□□□□ -0.77
MECOM-208	ENST00000468789	KDM5C	P41229	1560 aa		10.25	□□□□□ -0.77
MECOM-208	ENST00000468789	ITPRIP	Q8IWB1	547 aa		10.25	□□□□□ -0.77
MECOM-208	ENST00000468789	NKTR	P30414	1462 aa	Known RBP	10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	TDRD9	Q8NDG6	1382 aa	Known RBP	10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	EHBP1L1	Q8N3D4	1523 aa		10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	CDK11B	P21127	795 aa	Known RBP	10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	PPP1R9B	Q96SB3	815 aa		10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	DYNC1I1	O14576	645 aa		10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	RBSN	Q9H1K0	784 aa		10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	ABCC5	O15440	1437 aa		10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	UGGT2	Q9NYU1	1516 aa		10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	NLRP1	Q9C000	1473 aa		10.24	□□□□□ -0.77
MECOM-208	ENST00000468789	PPP4R3B	Q5MIZ7	849 aa		10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	MTERF4	Q7Z6M4	381 aa	Known RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	PRPF40A	O75400	957 aa	Known RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	PRIM1	P49642	420 aa	Known RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	ZNF692	Q9BU19	519 aa	Predicted RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	MAGI3	Q5TCQ9	1506 aa		10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	CD2BP2	O95400	341 aa	Known RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	RAB3GAP1	Q15042	981 aa		10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	ZNF830	Q96NB3	372 aa	Predicted RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	CCDC94	Q9BW85	323 aa	Predicted RBP	10.23	□□□□□ -0.77
MECOM-208	ENST00000468789	CSPP1	Q1MSJ5	1256 aa		10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	SASS6	Q6UVJ0	657 aa		10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	CHAMP1	Q96JM3	812 aa		10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	CGN	Q9P2M7	1197 aa	Known RBP	10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	NOL7	Q9UMY1	257 aa	Known RBP	10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	POLR1A	O95602	1720 aa	Predicted RBP	10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	ZNF521	Q96K83	1311 aa		10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	CDK13	Q14004	1512 aa	Known RBP	10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	DMTN	Q08495	405 aa		10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	PLEKHH2	Q8IVE3	1493 aa		10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	THOC2	Q8NI27	1593 aa	Known RBP	10.22	□□□□□ -0.77
MECOM-208	ENST00000468789	ZBTB22	O15209	634 aa		10.21	□□□□□ -0.77
MECOM-208	ENST00000468789	BAG4	O95429	457 aa	Known RBP	10.21	□□□□□ -0.77
MECOM-208	ENST00000468789	ZSCAN23	Q3MJ62	389 aa		10.21	□□□□□ -0.77
MECOM-208	ENST00000468789	SYCE3	A1L190	88 aa		10.21	□□□□□ -0.77
MECOM-208	ENST00000468789	ZSCAN20	P17040	1043 aa	Predicted RBP	10.21	□□□□□ -0.77
MECOM-208	ENST00000468789	RARS	P54136	660 aa	Known RBP	10.21	□□□□□ -0.77
MECOM-208	ENST00000468789	ZKSCAN5	Q9Y2L8	839 aa		10.21	□□□□□ -0.77
MECOM-208	ENST00000468789	GCC2	Q8IWJ2	1684 aa		10.21	□□□□□ -0.78
MECOM-208	ENST00000468789	PZP	P20742	1482 aa		10.21	□□□□□ -0.78
MECOM-208	ENST00000468789	RALGAPB	Q86X10	1494 aa		10.21	□□□□□ -0.78
MECOM-208	ENST00000468789	GTF2E1	P29083	439 aa	Predicted RBP	10.21	□□□□□ -0.78
MECOM-208	ENST00000468789	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.21	□□□□□ -0.78
MECOM-208	ENST00000468789	WWC1	Q8IX03	1113 aa		10.21	□□□□□ -0.78
MECOM-208	ENST00000468789	GAS2L2	Q8NHY3	880 aa		10.21	□□□□□ -0.78
MECOM-208	ENST00000468789	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.2	□□□□□ -0.78
MECOM-208	ENST00000468789	KLHL40	Q2TBA0	621 aa		10.2	□□□□□ -0.78
MECOM-208	ENST00000468789	TSPY4	P0CV99	314 aa		10.2	□□□□□ -0.78
MECOM-208	ENST00000468789	TSPY10	P0CW01	314 aa		10.2	□□□□□ -0.78
MECOM-208	ENST00000468789	PTMS	P20962	102 aa		10.2	□□□□□ -0.78
MECOM-208	ENST00000468789	TESK2	Q96S53	571 aa		10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	GRIN2B	Q13224	1484 aa		10.19	□□□□□ -0.78
MECOM-208	ENST00000468789		K7ELQ4	463 aa	Predicted RBP	10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	PDIA4	P13667	645 aa	Known RBP	10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	STAC3	Q96MF2	364 aa		10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	TERF1	P54274	439 aa		10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	SMC5	Q8IY18	1101 aa		10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	SMC4	Q9NTJ3	1288 aa		10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.19	□□□□□ -0.78
MECOM-208	ENST00000468789	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.18	□□□□□ -0.78
MECOM-208	ENST00000468789	CAMSAP2	Q08AD1	1489 aa		10.18	□□□□□ -0.78
MECOM-208	ENST00000468789	TCOF1	Q13428	1488 aa	Known RBP	10.18	□□□□□ -0.78
MECOM-208	ENST00000468789	ZNF500	O60304	480 aa	Predicted RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms