RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ZC3H13Q5T200 1668 aaKnown RBP5.42□□□□□ -1.54
TRIM59-202ENST00000468542 KDM5DQ9BY66 1539 aa5.42□□□□□ -1.54
TRIM59-202ENST00000468542 VWDEQ8N2E2 1590 aa5.42□□□□□ -1.54
TRIM59-202ENST00000468542 ZNF777Q9ULD5 760 aaPredicted RBP5.41□□□□□ -1.54
TRIM59-202ENST00000468542 SPAG9O60271 1321 aaKnown RBP5.41□□□□□ -1.54
TRIM59-202ENST00000468542 ZNF644Q9H582 1327 aaPredicted RBP5.41□□□□□ -1.54
TRIM59-202ENST00000468542 MADDQ8WXG6 1647 aa5.41□□□□□ -1.54
TRIM59-202ENST00000468542 PRDM15P57071 1507 aaPredicted RBP5.4□□□□□ -1.54
TRIM59-202ENST00000468542 TSPY4P0CV99 314 aa5.4□□□□□ -1.54
TRIM59-202ENST00000468542 TSPY10P0CW01 314 aa5.4□□□□□ -1.54
TRIM59-202ENST00000468542 HNRNPMP52272 730 aaKnown RBP eCLIP5.4□□□□□ -1.54
TRIM59-202ENST00000468542 IRX5P78411 483 aaPredicted RBP5.4□□□□□ -1.54
TRIM59-202ENST00000468542 C3P01024 1663 aa5.4□□□□□ -1.55
TRIM59-202ENST00000468542 GCC2Q8IWJ2 1684 aa5.4□□□□□ -1.55
TRIM59-202ENST00000468542 ABCC5O15440 1437 aa5.4□□□□□ -1.55
TRIM59-202ENST00000468542 DAPK1P53355 1430 aa5.4□□□□□ -1.55
TRIM59-202ENST00000468542 DUOX2Q9NRD8 1548 aa5.39□□□□□ -1.55
TRIM59-202ENST00000468542 ROCK1Q13464 1354 aa5.39□□□□□ -1.55
TRIM59-202ENST00000468542 A2MP01023 1474 aa5.39□□□□□ -1.55
TRIM59-202ENST00000468542 UNC13BO14795 1591 aa5.38□□□□□ -1.55
TRIM59-202ENST00000468542 KDM5AP29375 1690 aaKnown RBP5.38□□□□□ -1.55
TRIM59-202ENST00000468542 ZNF142P52746 1687 aaPredicted RBP5.38□□□□□ -1.55
TRIM59-202ENST00000468542 KDM4FA0A1W2PPD8 638 aa5.38□□□□□ -1.55
TRIM59-202ENST00000468542 DHX29Q7Z478 1369 aaKnown RBP5.38□□□□□ -1.55
TRIM59-202ENST00000468542 NCOA1Q15788 1441 aa5.38□□□□□ -1.55
TRIM59-202ENST00000468542 ERBINQ96RT1 1412 aa5.38□□□□□ -1.55
TRIM59-202ENST00000468542 LMTK2Q8IWU2 1503 aa5.38□□□□□ -1.55
TRIM59-202ENST00000468542 RIMS1Q86UR5 1692 aaKnown RBP5.37□□□□□ -1.55
TRIM59-202ENST00000468542 SEC24BO95487 1268 aa5.37□□□□□ -1.55
TRIM59-202ENST00000468542 TMEM106CQ9BVX2 250 aa5.37□□□□□ -1.55
TRIM59-202ENST00000468542 ANKRD30AQ9BXX3 1397 aa5.37□□□□□ -1.55
TRIM59-202ENST00000468542 CNTLNQ9NXG0 1405 aa5.37□□□□□ -1.55
TRIM59-202ENST00000468542 PREX1Q8TCU6 1659 aa5.37□□□□□ -1.55
TRIM59-202ENST00000468542 CHRM1P11229 460 aaPredicted RBP5.36□□□□□ -1.55
TRIM59-202ENST00000468542 FAM50AQ14320 339 aaKnown RBP5.36□□□□□ -1.55
TRIM59-202ENST00000468542 ACIN1Q9UKV3 1341 aaKnown RBP5.36□□□□□ -1.55
TRIM59-202ENST00000468542 PTPRKQ15262 1439 aa5.36□□□□□ -1.55
TRIM59-202ENST00000468542 PTPRMP28827 1452 aa5.36□□□□□ -1.55
TRIM59-202ENST00000468542 IQGAP3Q86VI3 1631 aa5.36□□□□□ -1.55
TRIM59-202ENST00000468542 CLTCQ00610 1675 aaKnown RBP5.35□□□□□ -1.55
TRIM59-202ENST00000468542 NPATQ14207 1427 aa5.35□□□□□ -1.55
TRIM59-202ENST00000468542 ARHGAP31Q2M1Z3 1444 aa5.35□□□□□ -1.55
TRIM59-202ENST00000468542 KIF15Q9NS87 1388 aa5.35□□□□□ -1.55
TRIM59-202ENST00000468542 PYGBP11216 843 aa5.35□□□□□ -1.55
TRIM59-202ENST00000468542 DCAF8Q5TAQ9 597 aa5.35□□□□□ -1.55
TRIM59-202ENST00000468542 CEP152O94986 1710 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 TET3O43151 1660 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 CAMSAP1Q5T5Y3 1602 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 SPATA31D1Q6ZQQ2 1576 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 ABCC3O15438 1527 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 ST18O60284 1047 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 MYT1LQ9UL68 1186 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 PCDHB8Q9UN66 801 aa5.34□□□□□ -1.55
TRIM59-202ENST00000468542 PZPP20742 1482 aa5.33□□□□□ -1.56
TRIM59-202ENST00000468542 HFM1A2PYH4 1435 aa5.33□□□□□ -1.56
TRIM59-202ENST00000468542 ANKRD50Q9ULJ7 1429 aa5.33□□□□□ -1.56
TRIM59-202ENST00000468542 ARID4BQ4LE39 1312 aaPredicted RBP5.33□□□□□ -1.56
TRIM59-202ENST00000468542 GSE1Q14687 1217 aa5.33□□□□□ -1.56
TRIM59-202ENST00000468542 OCEL1Q9H607 264 aa5.33□□□□□ -1.56
TRIM59-202ENST00000468542 PIK3C2BO00750 1634 aa5.33□□□□□ -1.56
TRIM59-202ENST00000468542 EFCAB6Q5THR3 1501 aa5.33□□□□□ -1.56
TRIM59-202ENST00000468542 RPRD2Q5VT52 1461 aaKnown RBP5.32□□□□□ -1.56
TRIM59-202ENST00000468542 PLCG2P16885 1265 aa5.32□□□□□ -1.56
TRIM59-202ENST00000468542 PPARGC1BQ86YN6 1023 aaKnown RBP5.32□□□□□ -1.56
TRIM59-202ENST00000468542 SLAIN1Q8ND83 568 aa5.32□□□□□ -1.56
TRIM59-202ENST00000468542 MYO3AQ8NEV4 1616 aa5.32□□□□□ -1.56
TRIM59-202ENST00000468542 LMTK3Q96Q04 1460 aa5.32□□□□□ -1.56
TRIM59-202ENST00000468542 STRCQ7RTU9 1775 aa5.32□□□□□ -1.56
TRIM59-202ENST00000468542 NAIPQ13075 1403 aa5.31□□□□□ -1.56
TRIM59-202ENST00000468542 E9PCH4 1651 aa5.31□□□□□ -1.56
TRIM59-202ENST00000468542 KIF3BO15066 747 aa5.31□□□□□ -1.56
TRIM59-202ENST00000468542 ZNF467Q7Z7K2 595 aaPredicted RBP5.31□□□□□ -1.56
TRIM59-202ENST00000468542 ILDR1Q86SU0 546 aaPredicted RBP5.31□□□□□ -1.56
TRIM59-202ENST00000468542 PDCD7Q8N8D1 485 aaKnown RBP5.31□□□□□ -1.56
TRIM59-202ENST00000468542 RRP7BPQ9NSQ0 103 aa5.31□□□□□ -1.56
TRIM59-202ENST00000468542 NEURL4Q96JN8 1562 aa5.3□□□□□ -1.56
TRIM59-202ENST00000468542 HRCP23327 699 aa5.3□□□□□ -1.56
TRIM59-202ENST00000468542 VASPP50552 380 aaPredicted RBP5.3□□□□□ -1.56
TRIM59-202ENST00000468542 ESF1Q9H501 851 aaKnown RBP5.3□□□□□ -1.56
TRIM59-202ENST00000468542 CHIC2Q9UKJ5 165 aa5.3□□□□□ -1.56
TRIM59-202ENST00000468542 UBR1Q8IWV7 1749 aa5.3□□□□□ -1.56
TRIM59-202ENST00000468542 NOS1P29475 1434 aa5.3□□□□□ -1.56
TRIM59-202ENST00000468542 ZMYM3Q14202 1370 aa5.29□□□□□ -1.56
TRIM59-202ENST00000468542 KANK1Q14678 1352 aa5.29□□□□□ -1.56
TRIM59-202ENST00000468542 SYNMO15061 1565 aa5.29□□□□□ -1.56
TRIM59-202ENST00000468542 WASHC2CQ9Y4E1 1318 aa5.29□□□□□ -1.56
TRIM59-202ENST00000468542 POLR1AO95602 1720 aaPredicted RBP5.29□□□□□ -1.56
TRIM59-202ENST00000468542 SPHKAPQ2M3C7 1700 aa5.29□□□□□ -1.56
TRIM59-202ENST00000468542 PLA2R1Q13018 1463 aa5.29□□□□□ -1.56
TRIM59-202ENST00000468542 GGT6Q6P531 493 aa5.29□□□□□ -1.56
TRIM59-202ENST00000468542 TMEM121BQ9BXQ6 578 aaPredicted RBP5.29□□□□□ -1.56
TRIM59-202ENST00000468542 CEP170BQ9Y4F5 1589 aaPredicted RBP5.29□□□□□ -1.56
TRIM59-202ENST00000468542 ERVK-7P63135 1459 aa5.28□□□□□ -1.56
TRIM59-202ENST00000468542 NLRP1Q9C000 1473 aa5.28□□□□□ -1.56
TRIM59-202ENST00000468542 SNPHO15079 494 aa5.28□□□□□ -1.56
TRIM59-202ENST00000468542 CFAP65Q6ZU64 1925 aaKnown RBP5.28□□□□□ -1.56
TRIM59-202ENST00000468542 A2ML1A8K2U0 1454 aa5.27□□□□□ -1.57
TRIM59-202ENST00000468542 ARHGAP23Q9P227 1491 aa5.27□□□□□ -1.57
TRIM59-202ENST00000468542 PTPRTO14522 1441 aa5.27□□□□□ -1.57
TRIM59-202ENST00000468542 MLECQ14165 292 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms