RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CLTCL1P53675 1640 aa20.99■□□□□ 0.95
TSPAN4-211ENST00000468468 ANP32AP39687 249 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-211ENST00000468468 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
TSPAN4-211ENST00000468468 CDCA7LQ96GN5 454 aa20.98■□□□□ 0.95
TSPAN4-211ENST00000468468 PAK3O75914 559 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-211ENST00000468468 CFAP74Q9C0B2 1584 aa20.96■□□□□ 0.95
TSPAN4-211ENST00000468468 RAPGEF3O95398 923 aa20.95■□□□□ 0.94
TSPAN4-211ENST00000468468 IPO9Q96P70 1041 aaKnown RBP20.94■□□□□ 0.94
TSPAN4-211ENST00000468468 CEP152O94986 1710 aa20.94■□□□□ 0.94
TSPAN4-211ENST00000468468 BLMP54132 1417 aaPredicted RBP20.93■□□□□ 0.94
TSPAN4-211ENST00000468468 UGGT1Q9NYU2 1555 aa20.93■□□□□ 0.94
TSPAN4-211ENST00000468468 INSRP06213 1382 aa20.93■□□□□ 0.94
TSPAN4-211ENST00000468468 MLH3Q9UHC1 1453 aa20.92■□□□□ 0.94
TSPAN4-211ENST00000468468 GGT6Q6P531 493 aa20.91■□□□□ 0.94
TSPAN4-211ENST00000468468 FRMPD1Q5SYB0 1578 aa20.91■□□□□ 0.94
TSPAN4-211ENST00000468468 MADDQ8WXG6 1647 aa20.91■□□□□ 0.94
TSPAN4-211ENST00000468468 HECW2Q9P2P5 1572 aa20.9■□□□□ 0.94
TSPAN4-211ENST00000468468 ZMYM4Q5VZL5 1548 aa20.9■□□□□ 0.94
TSPAN4-211ENST00000468468 EFCAB6Q5THR3 1501 aa20.9■□□□□ 0.94
TSPAN4-211ENST00000468468 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-211ENST00000468468 RNF17Q9BXT8 1623 aaKnown RBP20.89■□□□□ 0.94
TSPAN4-211ENST00000468468 PPRC1Q5VV67 1664 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-211ENST00000468468 NEO1Q92859 1461 aa20.88■□□□□ 0.93
TSPAN4-211ENST00000468468 PLIN1O60240 522 aa20.88■□□□□ 0.93
TSPAN4-211ENST00000468468 ZBTB47Q9UFB7 747 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-211ENST00000468468 NBR1Q14596 966 aa20.87■□□□□ 0.93
TSPAN4-211ENST00000468468 ABCA6Q8N139 1617 aa20.87■□□□□ 0.93
TSPAN4-211ENST00000468468 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
TSPAN4-211ENST00000468468 KNSTRNQ9Y448 316 aa20.85■□□□□ 0.93
TSPAN4-211ENST00000468468 LMTK2Q8IWU2 1503 aa20.84■□□□□ 0.93
TSPAN4-211ENST00000468468 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.92
TSPAN4-211ENST00000468468 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.92
TSPAN4-211ENST00000468468 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.92
TSPAN4-211ENST00000468468 PDE4AP27815 886 aa20.82■□□□□ 0.92
TSPAN4-211ENST00000468468 PPP2R1AP30153 589 aa20.82■□□□□ 0.92
TSPAN4-211ENST00000468468 CRBNQ96SW2 442 aa20.82■□□□□ 0.92
TSPAN4-211ENST00000468468 NPATQ14207 1427 aa20.81■□□□□ 0.92
TSPAN4-211ENST00000468468 STAC3Q96MF2 364 aa20.81■□□□□ 0.92
TSPAN4-211ENST00000468468 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-211ENST00000468468 ADGRF5Q8IZF2 1346 aa20.81■□□□□ 0.92
TSPAN4-211ENST00000468468 IQGAP1P46940 1657 aa20.81■□□□□ 0.92
TSPAN4-211ENST00000468468 MAP3K4Q9Y6R4 1608 aa20.8■□□□□ 0.92
TSPAN4-211ENST00000468468 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-211ENST00000468468 MS4A1P11836 297 aa20.8■□□□□ 0.92
TSPAN4-211ENST00000468468 WDR43Q15061 677 aaKnown RBP eCLIP20.8■□□□□ 0.92
TSPAN4-211ENST00000468468 CDCA8Q53HL2 280 aa20.8■□□□□ 0.92
TSPAN4-211ENST00000468468 CFAP65Q6ZU64 1925 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-211ENST00000468468 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-211ENST00000468468 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
TSPAN4-211ENST00000468468 MROH2AA6NES4 1674 aa20.78■□□□□ 0.92
TSPAN4-211ENST00000468468 BACH2Q9BYV9 841 aa20.78■□□□□ 0.92
TSPAN4-211ENST00000468468 SCAF11Q99590 1463 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-211ENST00000468468 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
TSPAN4-211ENST00000468468 KIF1BO60333 1816 aa20.77■□□□□ 0.92
TSPAN4-211ENST00000468468 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
TSPAN4-211ENST00000468468 YEATS2Q9ULM3 1422 aa20.77■□□□□ 0.92
TSPAN4-211ENST00000468468 NEURL4Q96JN8 1562 aa20.77■□□□□ 0.91
TSPAN4-211ENST00000468468 RICTORQ6R327 1708 aa20.76■□□□□ 0.91
TSPAN4-211ENST00000468468 ABCC3O15438 1527 aa20.76■□□□□ 0.91
TSPAN4-211ENST00000468468 PLEKHH1Q9ULM0 1364 aa20.75■□□□□ 0.91
TSPAN4-211ENST00000468468 SYNMO15061 1565 aa20.74■□□□□ 0.91
TSPAN4-211ENST00000468468 C20orf194Q5TEA3 1177 aa20.74■□□□□ 0.91
TSPAN4-211ENST00000468468 MYOM2P54296 1465 aa20.74■□□□□ 0.91
TSPAN4-211ENST00000468468 DUSP27Q5VZP5 1158 aa20.73■□□□□ 0.91
TSPAN4-211ENST00000468468 GLI2P10070 1586 aa20.72■□□□□ 0.91
TSPAN4-211ENST00000468468 ASXL1Q8IXJ9 1541 aa20.72■□□□□ 0.91
TSPAN4-211ENST00000468468 NOS1P29475 1434 aa20.72■□□□□ 0.91
TSPAN4-211ENST00000468468 ADGRB3O60242 1522 aa20.72■□□□□ 0.91
TSPAN4-211ENST00000468468 EIF3AQ14152 1382 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-211ENST00000468468 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
TSPAN4-211ENST00000468468 GOLGA2Q08379 1002 aa20.7■□□□□ 0.9
TSPAN4-211ENST00000468468 SKAP1Q86WV1 359 aa20.7■□□□□ 0.9
TSPAN4-211ENST00000468468 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-211ENST00000468468 ZNF521Q96K83 1311 aa20.7■□□□□ 0.9
TSPAN4-211ENST00000468468 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
TSPAN4-211ENST00000468468 PIK3C2GO75747 1445 aa20.69■□□□□ 0.9
TSPAN4-211ENST00000468468 CAMSAP1Q5T5Y3 1602 aa20.69■□□□□ 0.9
TSPAN4-211ENST00000468468 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
TSPAN4-211ENST00000468468 SIGLEC1Q9BZZ2 1709 aa20.67■□□□□ 0.9
TSPAN4-211ENST00000468468 NPC1L1Q9UHC9 1359 aa20.67■□□□□ 0.9
TSPAN4-211ENST00000468468 MYOM1P52179 1685 aa20.67■□□□□ 0.9
TSPAN4-211ENST00000468468 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
TSPAN4-211ENST00000468468 TSPOAP1O95153 1857 aa20.65■□□□□ 0.9
TSPAN4-211ENST00000468468 CCDC146Q8IYE0 955 aa20.65■□□□□ 0.9
TSPAN4-211ENST00000468468 RTN4Q9NQC3 1192 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-211ENST00000468468 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-211ENST00000468468 SLFN5Q08AF3 891 aa20.64■□□□□ 0.9
TSPAN4-211ENST00000468468 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-211ENST00000468468 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-211ENST00000468468 KDM2BQ8NHM5 1336 aa20.64■□□□□ 0.89
TSPAN4-211ENST00000468468 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-211ENST00000468468 IL27Q8NEV9 243 aa20.63■□□□□ 0.89
TSPAN4-211ENST00000468468 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-211ENST00000468468 PPLO60437 1756 aa20.61■□□□□ 0.89
TSPAN4-211ENST00000468468 APAF1O14727 1248 aa20.6■□□□□ 0.89
TSPAN4-211ENST00000468468 TMEM132EQ6IEE7 984 aa20.6■□□□□ 0.89
TSPAN4-211ENST00000468468 IDI1Q13907 227 aa20.59■□□□□ 0.89
TSPAN4-211ENST00000468468 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
TSPAN4-211ENST00000468468 LAS1LQ9Y4W2 734 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-211ENST00000468468 ERVK-7P63135 1459 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms